Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_N02
         (674 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-9|CAA21575.2|  893|Caenorhabditis elegans Hypothetical ...    58   6e-09
Z92789-5|CAB07217.1|  397|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p...    27   9.2  
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p...    27   9.2  

>AL032631-9|CAA21575.2|  893|Caenorhabditis elegans Hypothetical
           protein Y106G6H.7 protein.
          Length = 893

 Score = 58.0 bits (134), Expect = 6e-09
 Identities = 27/64 (42%), Positives = 45/64 (70%)
 Frame = +3

Query: 177 SGLLMSVIRTLSASETNEQREKERAKLEKEYKKSDARLDELVAVHAQEITDVMQKFTAVG 356
           +GLL++VIR+L++S + +QRE E+++LEK YK+S A +D LV  H Q++   +  F  V 
Sbjct: 30  TGLLINVIRSLTSSVSEDQREVEKSRLEKGYKESGALIDRLVKNHQQDVEKCLVSFRDVS 89

Query: 357 TALS 368
           + +S
Sbjct: 90  SKIS 93


>Z92789-5|CAB07217.1|  397|Caenorhabditis elegans Hypothetical
           protein H02I12.3 protein.
          Length = 397

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
 Frame = +1

Query: 10  DE*VGMYLSTYLSS*LFVIIISK--SNNFVY 96
           +E +G+YLS +LSS + ++++ K  SN F+Y
Sbjct: 323 NENIGLYLSLFLSSSVNILVMLKLASNPFIY 353


>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical protein
            T12D8.9b protein.
          Length = 1183

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 219  ETNEQREKERAKLEKEYKKSDARLDE 296
            E +++ EKE  +  KE KK DA++ E
Sbjct: 1065 EDDDEEEKEEKQKNKEEKKEDAKIHE 1090


>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical protein
            T12D8.9a protein.
          Length = 1181

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 219  ETNEQREKERAKLEKEYKKSDARLDE 296
            E +++ EKE  +  KE KK DA++ E
Sbjct: 1063 EDDDEEEKEEKQKNKEEKKEDAKIHE 1088


>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
            protein T12D8.9b protein.
          Length = 1183

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 219  ETNEQREKERAKLEKEYKKSDARLDE 296
            E +++ EKE  +  KE KK DA++ E
Sbjct: 1065 EDDDEEEKEEKQKNKEEKKEDAKIHE 1090


>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
            protein T12D8.9a protein.
          Length = 1181

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 219  ETNEQREKERAKLEKEYKKSDARLDE 296
            E +++ EKE  +  KE KK DA++ E
Sbjct: 1063 EDDDEEEKEEKQKNKEEKKEDAKIHE 1088


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,212,251
Number of Sequences: 27780
Number of extensions: 274208
Number of successful extensions: 940
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)