Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M23
(835 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 134 2e-32
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 79 6e-16
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 62 1e-10
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 45 1e-05
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 44 2e-05
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 39 8e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 39 0.001
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 38 0.002
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.005
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 34 0.022
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.61
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 29 0.61
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 0.81
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.1
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 29 1.1
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 2.5
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 4.3
SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated |Schizosaccharom... 26 5.7
SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase |Schizos... 26 7.6
SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces po... 26 7.6
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 134 bits (323), Expect = 2e-32
Identities = 75/219 (34%), Positives = 120/219 (54%), Gaps = 2/219 (0%)
Frame = +3
Query: 126 YLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPP 305
+ C +AE V + + +++ +V FYAPWCGHCK L PEY AA L+ D
Sbjct: 17 FFCASAE--VPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKDG-- 72
Query: 306 VALAKVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSS 485
++L +VDCTE G C ++S+ GYPTL +F+ G+ S+Y+GPR+ + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 486 KELLTVADFEAFTSK-DEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKT 662
K ++ E F K D++ VV FF K+ L + + A+ ++++ FA S E+ +
Sbjct: 132 KP-ISKDTLENFVEKADDLAVVAFF-KDQKLNDTYTEVAEVMKDDFVFAASDDKELAKSL 189
Query: 663 GYK-NNVVLYRPKRLQNKFEDSSVAFDGDTXKVSLKAFI 776
G +V + Q + + + GD S+ FI
Sbjct: 190 GSNFPGIVAFTKDAAQ---DSDKLVYTGDWDPASIADFI 225
Score = 69.3 bits (162), Expect = 6e-13
Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Frame = +3
Query: 141 AEEDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALA 317
++ED++ L +F V+ + LV FYAPWCGHCK L P Y A +DD V +A
Sbjct: 353 SQEDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEY-SDDSNVVVA 411
Query: 318 KVDCTEGGKSTCEQFSVSGYPTLKIFRKGELSS--EYNGPRESNGIVKYM--RAQVGPSS 485
K+D TE S S+SG+PT+ F+ + + Y G R + ++ A P
Sbjct: 412 KIDATENDISV----SISGFPTIMFFKANDKVNPVRYEGDRTLEDLSAFIDKHASFEPIK 467
Query: 486 KE 491
KE
Sbjct: 468 KE 469
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 79.4 bits (187), Expect = 6e-16
Identities = 48/152 (31%), Positives = 78/152 (51%), Gaps = 6/152 (3%)
Frame = +3
Query: 63 KAPAKFEMFGSLKFVLLLGIIYLCKAAEEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 242
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 243 CKRLKPEYAVAAGLLKTDDPPVALAKVDC-TEGGKSTCEQFSVSGYPTLKIF---RKGE- 407
CK+L P Y A L + P A VDC + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 408 -LSSEYNGPRESNGIVKYMRAQVGPSSKELLT 500
S++YNG R + K++ + PS ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 61.7 bits (143), Expect = 1e-10
Identities = 52/210 (24%), Positives = 84/210 (40%), Gaps = 5/210 (2%)
Frame = +3
Query: 150 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVD 326
+V++L +F V+ LV FYA WCG+CKRL P Y + K ++P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFK-NEPNVEIVKIN 199
Query: 327 CTEGGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLT 500
+ V+ +PT+K F K + Y G R +++Y+ + G T
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSGTQRSPDGT 258
Query: 501 VADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLR-EEVTFAHSSANEVLEKTGYKNN 677
+ + F + + K L+ +L E+ + +V EK N
Sbjct: 259 LLSTAGRIPTFDEFAAEFLDMSNAAKEVVLEKVKQLALEDSSRWTKYYKKVFEKILNDEN 318
Query: 678 VVLYRPKRLQNKFEDSSVAF-DGDTXKVSL 764
V KRL S+A D K L
Sbjct: 319 WVHKEAKRLSKLLRQKSIALASADDFKTRL 348
Score = 58.8 bits (136), Expect = 9e-10
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +3
Query: 207 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTL 386
AL+ FYA WCGHCK L P Y G L D V + K+D + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 387 KIF-RKGELSSEYNGPRESNGIVKYMRAQVGPSSKELL 497
F G +Y+ R+ + + +++ + G ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 45.2 bits (102), Expect = 1e-05
Identities = 31/118 (26%), Positives = 55/118 (46%)
Frame = +3
Query: 207 ALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTL 386
A VMF + HC+ AV + + + D + +A+V+C E K C F + +PT
Sbjct: 199 AFVMFVS--LKHCEDCFHWEAVWSSITRNTDERLKMAQVNCDE-EKEMCNHFHIKKFPTF 255
Query: 387 KIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFE 560
++F +G S +YNGP + ++ Y QV + D E+ + V + ++
Sbjct: 256 RVF-QGFDSIQYNGPLKYQQLLSYSN-QVASYQAIKIEEGDIESIENSHPVFFLVLYD 311
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 44.4 bits (100), Expect = 2e-05
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Frame = +3
Query: 162 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKP--EYAVAAGLLKTDDPPVALAKVDCTE 335
LTD+D + +S+ T + +Y P CG CKRL P + V + + +VDC++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 336 GGKSTCEQFSVSGYPTLKIFRKGELSSE--YNGPRESNGIVKYMRAQVGPSSKELLTVAD 509
S+C ++ PTL +++ GE+ E + ++ ++ + P + + +D
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SD 145
Query: 510 FEAFTSKD 533
+ T +D
Sbjct: 146 EDVLTDED 153
Score = 40.7 bits (91), Expect = 2e-04
Identities = 30/134 (22%), Positives = 58/134 (43%)
Frame = +3
Query: 168 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKS 347
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMRGK---LNVAHINCAVS-KR 343
Query: 348 TCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFEAFTS 527
C+Q+S+ +PT +F K E EY G +V + +E+ + A +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSFAEEAANFEIREVELLDTVNAEKN 402
Query: 528 KDEVVVVGFFEKES 569
D V + F++ +S
Sbjct: 403 GD-VFFLYFYDDDS 415
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 39.1 bits (87), Expect = 8e-04
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = +3
Query: 171 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKST 350
S+F +++ Q +V F+A WCG CK + P++ + KVD + +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKFEQFSNTYS----DATFIKVDVDQLSEIA 64
Query: 351 CEQFSVSGYPTLKIFRKGELSSEYNG 428
E V P+ +++ GE E G
Sbjct: 65 AEA-GVHAMPSFFLYKNGEKIEEIVG 89
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 38.7 bits (86), Expect = 0.001
Identities = 23/78 (29%), Positives = 36/78 (46%)
Frame = +3
Query: 174 DFSAVLSQHDTALVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTC 353
D++ +S +V FYA WCG CK LKP L + + V+ +
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP----FLEKLSEQNQKASFIAVN-ADKFSDIA 81
Query: 354 EQFSVSGYPTLKIFRKGE 407
++ V PT+ +FRKG+
Sbjct: 82 QKNGVYALPTMVLFRKGQ 99
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 37.5 bits (83), Expect = 0.002
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 17/190 (8%)
Frame = -1
Query: 763 SDTXSVSPSKATEESSNLFWSRLGRYKTTLFLYPVFSR--TSLAEE*AKVTSSLNLSAVL 590
S + +S S AT SS+ S L ++ F P S TSL ++ +SS + S
Sbjct: 44 SSSSMLSSSSATAISSSSSSSPLS---SSSFTSPASSSFITSLVSSSSQQSSSSSASLTS 100
Query: 589 RNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEE 410
+S + S S +PT+++SS + +S S+ V SS G + + + + + S Y
Sbjct: 101 SSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSSSSSYHSS 160
Query: 409 S------SPFLKIFSVGYPD---------TENCSQVLLPPSVQSTLASATGGSSVFNRPA 275
S S I S Y D T S+V+ P + + +S++ SS + P
Sbjct: 161 SMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNNWNSSSSFTSSTSSTPI 220
Query: 274 ATAYSGFSLL 245
+++YS L
Sbjct: 221 SSSYSSSGTL 230
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +3
Query: 222 YAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLKIFRK 401
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 402 GE 407
G+
Sbjct: 84 GK 85
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 34.3 bits (75), Expect = 0.022
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Frame = -1
Query: 763 SDTXSVSPSKATEESSNLFWSRLGRYKTTLFLYPVFSRTSLAEE*AKVTSSLNLSAVLRN 584
S VS S T S+ L S + T+ F F+ TS + ++ L+ S V
Sbjct: 592 SGNGDVSGSVTTPTSTPLSNSTVA--PTSTFTSSGFNTTSGLPT-SSASTPLSNSTVAPT 648
Query: 583 SPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLG-PLYSEES 407
S F S F+ TSS +S S+ V +S + +P S PL +
Sbjct: 649 STFTSSGFNTTSGLPTSSASTPSSNSSIVPTSTFTSSGF-NTTSGLPTSSASTPLSNSTV 707
Query: 406 SPFLKIFSVGYPDTENCSQVLLPPSVQSTLASATGGSSVFNRPAATAYS 260
+P S G+ T + + ++ A + GSS F+R ++T S
Sbjct: 708 APTSTFTSSGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTS 756
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 628 AKVTSSLNLSAVLRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRSSLEL 479
A TSS S NS S S + +TTS+ +S S+TV SS L
Sbjct: 206 ATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPL 255
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.61
Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 10/132 (7%)
Frame = +3
Query: 459 MRAQVGPSSKELLTVADFEAFTSKDEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSS 638
+R+++ +K + + + + +SK+ + +E D F K +K+R + +S
Sbjct: 1008 LRSELLDLNKRVEVLKEEKESSSKELAKQLEDAVREKDSALSFKKDYEKIRSDADRVITS 1067
Query: 639 ANEVLEK---------TGYKNNVVLYRPKRLQNKFEDSSVAFDG-DTXKVSLKAFIKENY 788
E +EK + Y++ +V + R K D FD +T + LKA ++ +
Sbjct: 1068 LKEDIEKERSLMKECHSNYESEIVSH--GRTTQKLRDLRTEFDEVNTKYLKLKANFEQQH 1125
Query: 789 HGLVGVRQKDNI 824
GL G + NI
Sbjct: 1126 SGLSGAEKDWNI 1137
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 29.5 bits (63), Expect = 0.61
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 658 FSRTSLAEE*AKVTSSLNLSAVLRNSPFRSDSFSKNPT 545
F+R SL ++ K ++ +L + N+P +SF K+PT
Sbjct: 366 FTRLSLYQQAPKKSNLPSLDVIASNNPLVEESFQKDPT 403
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 29.1 bits (62), Expect = 0.81
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 9/137 (6%)
Frame = +3
Query: 342 KSTCEQFSVSGYPTLKIFRKGELSSEYNGPRESNGIVKYMRAQVGPSSKELLTVADFE-- 515
KS E+ + Y LK+ + E + +YN P N + + + T +D E
Sbjct: 37 KSPLEKEIANEYEALKVTERKEDTQDYNEPELHNSNDPTVDLYADTYATQAATESDSELE 96
Query: 516 --AFTSKDEVVVVGFFEKESD-LKGEFLKT-ADKLREEVTF-AHSSANEVLEKTGYKNNV 680
F+ DE + E+ + LK EF + A K + + F + EV++ T V
Sbjct: 97 DALFSQLDEFDDTAYREQRLEMLKKEFARVEAAKEKGHMQFLTVENEREVMDFTLSSKKV 156
Query: 681 VL--YRPKRLQNKFEDS 725
V+ Y P ++ K DS
Sbjct: 157 VIHFYHPDFIRCKIIDS 173
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 28.7 bits (61), Expect = 1.1
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = -1
Query: 619 TSSLNLSAVLRNSPFRSDSFSKNPTTTTSSLEVKA--SKSATVRSSLELGPTWARMYLTM 446
TSS LS+ S S S S + T T+SSL + S S++ S+ + +
Sbjct: 205 TSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTAS 264
Query: 445 PLDSLGPLYSEESSPFLKIFSVGYPDTENCSQVLLPPSVQSTLASATGGSSVFN 284
S + S SS S + + S P S ST++S++ SS F+
Sbjct: 265 SSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFS 318
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +3
Query: 528 KDEVVVVGFFEKESDLKGEFLKTADKLREEVTFAHSSANEVLEKTGYKNNVVLYRPKRLQ 707
K V+ G + + L+ A T + S +NE+ EKT K + L + K++
Sbjct: 1235 KVNAVLAGLQKNDPSAYSNMLE-ATHFELSTTSSTSDSNEI-EKTQEKKRLALEKQKKIM 1292
Query: 708 NKFEDSSVAF 737
+F D +F
Sbjct: 1293 QQFRDQQASF 1302
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +3
Query: 210 LVMFYAPWCGHCKRLKPEYAVAAGLLKTDDPPVALAKVDCTEGGKSTCEQFSVSGYPTLK 389
L+ FYAPW CK++ + A D K++ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 390 IFRKGELSSEYNG 428
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +1
Query: 154 FSILQIPTFRLFYLNMIQPWSCF 222
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
>SPBP8B7.12c |fta3|sma3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 220
Score = 26.2 bits (55), Expect = 5.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 664 PVFSRTSLAEE*AKVTSSLNLSA--VLRNSPFRSDSFSKNPTTTTSSLEVKASKSATVRS 491
P+ L+EE K+ SS+ ++ + + + + +SSLE+ ASK + RS
Sbjct: 104 PLNETEHLSEENLKIESSITFTSEEIEKEKENIKSVLLPSVQSISSSLELYASKESDYRS 163
Query: 490 SLE 482
S+E
Sbjct: 164 SIE 166
>SPAC6F6.11c |||pyridoxine-pyridoxal-pyridoxamine kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 600 DKLREEVTFAHSSANEVLEKT 662
DKL++ V A SS +EV++KT
Sbjct: 248 DKLKKSVEMALSSVHEVIQKT 268
>SPAC3C7.05c |mug191||alpha-1,6-mannanase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = -1
Query: 565 SFSKNPTTTTSSLEVKASKSATVRSSLELGPTWARMYLTMPLDSLGPLYSEESSPFLKIF 386
+++ T T SL + + +E PT+ LD+ GPLY + + K++
Sbjct: 235 TYNTGTTMTAMSLLMGLGEFTKGLQDIEKLPTYLEDMARGALDTNGPLYDQSCNGSFKVW 294
Query: 385 S 383
S
Sbjct: 295 S 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,413,600
Number of Sequences: 5004
Number of extensions: 70943
Number of successful extensions: 262
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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