Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M22
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical pr... 126 7e-30
AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal... 126 7e-30
Z47812-3|CAA87790.1| 158|Caenorhabditis elegans Hypothetical pr... 33 0.087
Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical ... 27 5.7
Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z74032-4|CAA98463.2| 404|Caenorhabditis elegans Hypothetical pr... 27 7.5
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 7.5
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 7.5
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 27 7.5
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 26 10.0
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 26 10.0
U23455-6|AAC46536.2| 518|Caenorhabditis elegans Hypothetical pr... 26 10.0
>Z50109-2|CAA90434.1| 105|Caenorhabditis elegans Hypothetical
protein C09H10.2 protein.
Length = 105
Score = 126 bits (304), Expect = 7e-30
Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = +3
Query: 57 MVNVPKQRRTYXXXXXXXXXXXX-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 233
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 234 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 368
IVLR+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 61 AKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>AF304121-1|AAG50234.1| 105|Caenorhabditis elegans 60S ribosomal
protein L44 L41 protein.
Length = 105
Score = 126 bits (304), Expect = 7e-30
Identities = 60/105 (57%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Frame = +3
Query: 57 MVNVPKQRRTYXXXXXXXXXXXX-SQYKKSKERHAAQGRRRYDRKQQGYGGQSKPIFXXX 233
MVNVPK RRT+ +QYKK KE AQGRRRYDRKQ G+GGQ+KPIF
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 234 XXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 368
IVLR+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 61 AKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
>Z47812-3|CAA87790.1| 158|Caenorhabditis elegans Hypothetical
protein T05H10.3 protein.
Length = 158
Score = 33.1 bits (72), Expect = 0.087
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 133 YCDTLCTLWHLHFLQYVLRCFGTFTIFEFVRHDINKRQKEH 11
YCD +C H F+ Y+ + G F F+ + + KR EH
Sbjct: 74 YCDIVCPKSHTVFISYIDQ--GHRACFNFITYQVEKRNDEH 112
>Z83125-4|CAB05616.1| 376|Caenorhabditis elegans Hypothetical
protein T15D6.5 protein.
Length = 376
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 67 YQNSAGRTAKNVNATKYTRYHSTKSPRKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKPL 246
Y +AGRT + + + KS R LP++++ + +V+ P S R+K L
Sbjct: 86 YSTTAGRTRDFGSRFRVSFADIQKSQRWLHLPKIKNPTWNRDILMIVASRPGSVSRRKVL 145
Query: 247 RK 252
RK
Sbjct: 146 RK 147
>AF026201-1|AAB71239.1| 113|Caenorhabditis elegans Hypothetical
protein D1079.1 protein.
Length = 113
Score = 27.1 bits (57), Expect = 5.7
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -1
Query: 159 QRAFPW-TFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNV 22
QR++P+ TF + +LC +YI C S +V + FL +F + +NV
Sbjct: 30 QRSYPFQTFLAFLDFMLCALYIHCFGLLSISVEYKIAFLYNF-VMDSNV 77
>Z83319-2|CAB05904.2| 433|Caenorhabditis elegans Hypothetical
protein T02D1.6 protein.
Length = 433
Score = 26.6 bits (56), Expect = 7.5
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = -1
Query: 207 DHRNPAVYDHNVFYPGQRAFPWTFCTVIPCVLCGIYIFCSTSCAVLV 67
+H V+ NV+ P Q P V+ VLC I C S + +
Sbjct: 38 NHTGGPVWVRNVYPPIQELQPKVLIVVVVFVLCFIVGVCGNSSIITI 84
>Z81497-1|CAB04077.1| 1081|Caenorhabditis elegans Hypothetical
protein F10C2.4 protein.
Length = 1081
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 121 RYHSTKSPRKGTLPRV-EDVMIVNSR 195
+Y +TKS R+G LP + ED++ R
Sbjct: 612 QYFATKSKRRGLLPEILEDILAARKR 637
>Z74032-4|CAA98463.2| 404|Caenorhabditis elegans Hypothetical
protein F35B12.5 protein.
Length = 404
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +1
Query: 70 QNSAGRTAKNVNATKYTRYHSTKSP--RKGTLPRVEDVMIVNSRVTVVSPNPSSKRRQKP 243
Q R + +NA + S +K T+P+ + + V +P R+QKP
Sbjct: 149 QEETARRQEELNAQNLVKMQELMSNFFQKITIPKQQAIEPVEKDKENFHESPRQSRQQKP 208
Query: 244 LRKLCSVLSVL 276
K+ S V+
Sbjct: 209 ASKIASAREVI 219
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 145 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 50
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 145 LDFLYCDTLCTLWHLHFLQYVLRCFGTFTIFE 50
++ + C+T L FL +V C+GT T +
Sbjct: 736 IELIQCETSVKLLDRRFLMHVSICYGTHTFLD 767
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 26.6 bits (56), Expect = 7.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 258 LRLECADCKVRSQVALKRCKHFELGGDKK 344
+ +E A+CK R + + K+CK E ++K
Sbjct: 152 MAVELAECKKRDEESRKKCKQLEAELERK 180
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 339 CHHQAQSACISSMQPVISPCNQHTQ 265
C Q QS C+ QPV S C Q
Sbjct: 137 CQQQCQSTCVQQQQPV-SQCQPQCQ 160
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 339 CHHQAQSACISSMQPVISPCNQHTQ 265
C Q QS C+ QPV S C Q
Sbjct: 137 CQQQCQSTCVQQQQPV-SQCQPQCQ 160
>U23455-6|AAC46536.2| 518|Caenorhabditis elegans Hypothetical
protein F55E10.7 protein.
Length = 518
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -1
Query: 126 IPCVLCGIYIFCSTSCAVLVRSPFLSSFGTISTNVKKSIGR 4
I C L ++I C+ A+L + + F T+ S+GR
Sbjct: 221 IVCYLVPLFIICAVYLAILHKLFIHTRFSTVGKKTSISLGR 261
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,937,424
Number of Sequences: 27780
Number of extensions: 176973
Number of successful extensions: 615
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 587
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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