Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M18
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   3.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   3.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   3.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   3.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   3.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   3.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   3.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   6.7  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 245 TLHKEVDSNNHGKHATKTTQ-RWFSTPRAGSSP 340
           T+H    S+++  +     Q +W +TP+AGS+P
Sbjct: 156 TMHGYHPSSSYPANEISCPQVQWSATPQAGSTP 188


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 108 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 150


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +3

Query: 450 TPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNGTTFSGRS 578
           +PPG P      ++L S  S+ ++ S        N  + SG+S
Sbjct: 152 SPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQS 194


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 662 LLLSSLCRSQIFITCQ 615
           L+  S  R+QIFITC+
Sbjct: 122 LIWKSYKRTQIFITCE 137


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 13/59 (22%), Positives = 28/59 (47%)
 Frame = +3

Query: 198 SSSLRLRGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQRSHSFNSNAQQ 374
           SSS R+   ++  R PL T + + +  +       +       PGHR+  +S ++ +++
Sbjct: 26  SSSERVTRRRL--RRPLKTTQSVSVTKDQDVSSSVNRFRLRSRPGHRKTDNSLSATSKK 82


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,236
Number of Sequences: 336
Number of extensions: 3685
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)