Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M18
(815 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 30 1.7
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 30 1.7
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 30 1.7
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 30 1.7
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 30 1.7
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 30 1.7
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 30 1.7
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 30 1.7
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 30 1.7
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 30 1.7
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 30 1.7
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 30 1.7
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 30 1.7
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 30 1.7
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 29 3.0
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 29 3.0
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 4.0
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 4.0
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical pr... 29 5.3
L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily ass... 29 5.3
L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily ass... 29 5.3
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 5.3
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 5.3
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 29 5.3
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 5.3
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 5.3
U97196-11|AAB52464.1| 273|Caenorhabditis elegans Hypothetical p... 28 9.2
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 57.2 bits (132), Expect = 1e-08
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Frame = +3
Query: 333 HRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPP--GSPEDLPDDESLHSYG 506
H R ++KP ++ Q A +D S + P DL D S+ S
Sbjct: 97 HLMRDLGNGRREEEKPTRALQIRQTAILDSEDSDMNEGELLAQFSQPPDLDDAMSVTSST 156
Query: 507 SAATAASVDAGYAPFNGTTFSGRSMRYVLHCS------SHAGLAGDEYLTPTQRAQKQIR 668
++ +A V G ++G+ RYV HC +H L G EY+TPTQR K++
Sbjct: 157 CSSASAIV--------GRWWNGKDTRYVPHCQKKGCNHAHHDLQG-EYITPTQRRNKELA 207
Query: 669 RLKSMLSQAKRDLEKKDSEIFQLTKEVXELRLY 767
+LK L QA + ++KD + L +V E+ ++
Sbjct: 208 QLKKELRQALSERDEKDKHLSDLRDKVKEIEIF 240
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 624 DEYLTPTQRA-QKQIRRLKSMLSQAKRDLEKKDSEIFQLTKEVXELRL 764
D+YLT RA + I RLK +S K+DLE + + L K E +L
Sbjct: 756 DDYLTEHIRANESMIERLKLEISGLKKDLENQKMQA-HLQKSELEKKL 802
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 57.2 bits (132), Expect = 1e-08
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 8/153 (5%)
Frame = +3
Query: 333 HRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPP--GSPEDLPDDESLHSYG 506
H R ++KP ++ Q A +D S + P DL D S+ S
Sbjct: 97 HLMRDLGNGRREEEKPTRALQIRQTAILDSEDSDMNEGELLAQFSQPPDLDDAMSVTSST 156
Query: 507 SAATAASVDAGYAPFNGTTFSGRSMRYVLHCS------SHAGLAGDEYLTPTQRAQKQIR 668
++ +A V G ++G+ RYV HC +H L G EY+TPTQR K++
Sbjct: 157 CSSASAIV--------GRWWNGKDTRYVPHCQKKGCNHAHHDLQG-EYITPTQRRNKELA 207
Query: 669 RLKSMLSQAKRDLEKKDSEIFQLTKEVXELRLY 767
+LK L QA + ++KD + L +V E+ ++
Sbjct: 208 QLKKELRQALSERDEKDKHLSDLRDKVKEIEIF 240
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 624 DEYLTPTQRA-QKQIRRLKSMLSQAKRDLEKKDSEIFQLTKEVXELRL 764
D+YLT RA + I RLK +S K+DLE + + L K E +L
Sbjct: 756 DDYLTEHIRANESMIERLKLEISGLKKDLENQKMQA-HLQKSELEKKL 802
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 429 SMTDSAHTPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNG 557
S+T+++ PP + ED + E L GSA A +AG A NG
Sbjct: 698 SVTENSCIPPVTIEDEENLEKLSHIGSALMAEYCEAGVACMNG 740
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 429 SMTDSAHTPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNG 557
S+T+++ PP + ED + E L GSA A +AG A NG
Sbjct: 698 SVTENSCIPPVTIEDEENLEKLSHIGSALMAEYCEAGVACMNG 740
>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform f protein.
Length = 1418
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 936 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 995
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 996 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1055
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1056 KQALAEEEKRNEAKQNTFVRKLLKK 1080
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 936 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 995
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 996 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1055
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1056 KQALAEEEKRNEAKQNTFVRKLLKK 1080
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 936 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 995
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 996 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1055
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1056 KQALAEEEKRNEAKQNTFVRKLLKK 1080
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 984 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 1043
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 1044 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1103
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1104 KQALAEEEKRNEAKQNTFVRKLLKK 1128
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 943 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 1002
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 1003 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1062
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1063 KQALAEEEKRNEAKQNTFVRKLLKK 1087
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 943 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 1002
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 1003 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1062
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1063 KQALAEEEKRNEAKQNTFVRKLLKK 1087
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 936 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 995
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 996 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1055
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1056 KQALAEEEKRNEAKQNTFVRKLLKK 1080
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 984 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 1043
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 1044 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1103
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1104 KQALAEEEKRNEAKQNTFVRKLLKK 1128
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 936 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 995
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 996 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1055
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1056 KQALAEEEKRNEAKQNTFVRKLLKK 1080
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 30.3 bits (65), Expect = 1.7
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 321 QEPGHRQRSHS---FNSNAQQKPKKSCLKTQDACIDRNLSMTDSAHTPPGSPEDLPDDES 491
Q P + S S ++N P++ DA ID+ L + +SA + DD
Sbjct: 936 QRPSSPEESPSPRLLSANYHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSR 995
Query: 492 LHSYGSAATAASVDAGYAPFNGTTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQIRR 671
L+ + S + Y ++SG + +C H A E + +
Sbjct: 996 LNRHASLVLPVANGVPYRRQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQEL 1055
Query: 672 LKSMLSQAKRDLEKKDSEIFQLTKE 746
+++ + KR+ K+++ + +L K+
Sbjct: 1056 KQALAEEEKRNEAKQNTFVRKLLKK 1080
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 429 SMTDSAHTPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNG 557
S+T+++ PP + ED + E L GSA A +AG A NG
Sbjct: 698 SVTENSCIPPVTIEDEENLEKLSHIGSALMAEYCEAGVACMNG 740
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +3
Query: 429 SMTDSAHTPPGSPEDLPDDESLHSYGSAATAASVDAGYAPFNG 557
S+T+++ PP + ED + E L GSA A +AG A NG
Sbjct: 698 SVTENSCIPPVTIEDEENLEKLSHIGSALMAEYCEAGVACMNG 740
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +3
Query: 138 SAELHDEHCCAANVSGNFRRSSSLRLRGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSR 317
S L+D +G + +SS+ GE R TRKL +I P + ++ R
Sbjct: 120 SRVLYDTATVIPTRNGTHQNASSISACGEFQFLRKRKDTRKLSQMIFGAVPNLKTNESFR 179
Query: 318 LQEPGHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSA 446
+ + + A K +K L A + RN ++ DS+
Sbjct: 180 IHVLEDEETILVSKTFAIPKYRKGALPAAAAAVVRNEALMDSS 222
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 29.5 bits (63), Expect = 3.0
Identities = 25/103 (24%), Positives = 42/103 (40%)
Frame = +3
Query: 138 SAELHDEHCCAANVSGNFRRSSSLRLRGEKMVQRSPLCTRKLIPIITENTPQKQRSDGSR 317
S L+D +G + +SS+ GE R TRKL +I P + ++ R
Sbjct: 181 SRVLYDTATVIPTRNGTHQNASSISACGEFQFLRKRKDTRKLSQMIFGAVPNLKTNESFR 240
Query: 318 LQEPGHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSA 446
+ + + A K +K L A + RN ++ DS+
Sbjct: 241 IHVLEDEETILVSKTFAIPKYRKGALPAAAAAVVRNEALMDSS 283
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +3
Query: 426 LSMTDSAHTPPGSPEDLPDDESLHSYGSAATAAS-----VDAGYAPFNGTTF--SGRSMR 584
LS + S H P S LP+ SLHS +A T+ S + AP T SG S
Sbjct: 734 LSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLSTTTTPTHSQGAPSTSTPIGGSGNSTL 793
Query: 585 YVLH 596
VLH
Sbjct: 794 SVLH 797
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/64 (37%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = +3
Query: 426 LSMTDSAHTPPGSPEDLPDDESLHSYGSAATAAS-----VDAGYAPFNGTTF--SGRSMR 584
LS + S H P S LP+ SLHS +A T+ S + AP T SG S
Sbjct: 734 LSNSSSPHQPTPSLCSLPESSSLHSIPTAMTSLSTTTTPTHSQGAPSTSTPIGGSGNSTL 793
Query: 585 YVLH 596
VLH
Sbjct: 794 SVLH 797
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 237 RSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQR 344
RSP T ++ TP +RS L EPG R+R
Sbjct: 559 RSPARTPATPIVVINQTPSSRRSSQDLLGEPGQRRR 594
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 237 RSPLCTRKLIPIITENTPQKQRSDGSRLQEPGHRQR 344
RSP T ++ TP +RS L EPG R+R
Sbjct: 559 RSPARTPATPIVVINQTPSSRRSSQDLLGEPGQRRR 594
>Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical
protein T24F1.2 protein.
Length = 588
Score = 28.7 bits (61), Expect = 5.3
Identities = 34/140 (24%), Positives = 51/140 (36%), Gaps = 5/140 (3%)
Frame = +3
Query: 111 QMNXNYSXXSAELHDEHCCAANVSGNFRRSSSLR--LRGEKMVQRSPLCTRKLIPIITEN 284
Q N S + D AA RSS + L + +R + ++L P +
Sbjct: 423 QTKPNNHVESMDWDDSESMAAQSVAQSTRSSHFKPGLLSRNINER--MTAQQLTPSVANL 480
Query: 285 TPQKQRSDGSRLQEPGHRQRSHSFNSNAQQK---PKKSCLKTQDACIDRNLSMTDSAHTP 455
+ D + HRQ + N + P +S + +Q DR+ M AHT
Sbjct: 481 NLDTRSVDSPSIFSRQHRQMAQQQNHTPTRSLFGPPRSMVASQ---YDRSHYMAPEAHTR 537
Query: 456 PGSPEDLPDDESLHSYGSAA 515
PGS + HS S A
Sbjct: 538 PGSVFTSVSQQDGHSTVSGA 557
>L07144-6|AAK21443.1| 834|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform a protein.
Length = 834
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +3
Query: 633 LTPTQRAQKQIRRLK-------SMLSQAKRDLEKKDSEIFQLTKEVXELRLYKTSICSPD 791
+ P++ A K+I L+ S+ S+ +DLE+ + ++ LT+E +LRL + S D
Sbjct: 297 IPPSETAAKEIENLRLERDEQESIASRRLQDLEEMNKKVQTLTQENSKLRLETQTFFSVD 356
Query: 792 EKSTSXE 812
S E
Sbjct: 357 SIVNSEE 363
>L07144-5|AAU20841.1| 837|Caenorhabditis elegans Temporarily
assigned gene nameprotein 84, isoform b protein.
Length = 837
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Frame = +3
Query: 633 LTPTQRAQKQIRRLK-------SMLSQAKRDLEKKDSEIFQLTKEVXELRLYKTSICSPD 791
+ P++ A K+I L+ S+ S+ +DLE+ + ++ LT+E +LRL + S D
Sbjct: 297 IPPSETAAKEIENLRLERDEQESIASRRLQDLEEMNKKVQTLTQENSKLRLETQTFFSVD 356
Query: 792 EKSTSXE 812
S E
Sbjct: 357 SIVNSEE 363
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 558 TTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQI-RRLKSM--LSQAKRDLEKKDSEI 728
T SG+ + V C + GL GD+Y TP + + + ++ ++ S+ ++ E+++ ++
Sbjct: 169 TFSSGKPEKMVQKCLNDLGLGGDKY-TPARVINRSMGKKFRNFYKCSRGRKRKEREELDV 227
Query: 729 FQLTKEVXELRLYKTSICSPDE 794
LT E + RLY IC E
Sbjct: 228 DILTFEKFQ-RLY-NKICPRTE 247
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 558 TTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQI-RRLKSM--LSQAKRDLEKKDSEI 728
T SG+ + V C + GL GD+Y TP + + + ++ ++ S+ ++ E+++ ++
Sbjct: 171 TFSSGKPEKMVQKCLNDLGLGGDKY-TPARVINRSMGKKFRNFYKCSRGRKRKEREELDV 229
Query: 729 FQLTKEVXELRLYKTSICSPDE 794
LT E + RLY IC E
Sbjct: 230 DILTFEKFQ-RLY-NKICPRTE 249
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 558 TTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQI-RRLKSM--LSQAKRDLEKKDSEI 728
T SG+ + V C + GL GD+Y TP + + + ++ ++ S+ ++ E+++ ++
Sbjct: 171 TFSSGKPEKMVQKCLNDLGLGGDKY-TPARVINRSMGKKFRNFYKCSRGRKRKEREELDV 229
Query: 729 FQLTKEVXELRLYKTSICSPDE 794
LT E + RLY IC E
Sbjct: 230 DILTFEKFQ-RLY-NKICPRTE 249
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 558 TTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQI-RRLKSM--LSQAKRDLEKKDSEI 728
T SG+ + V C + GL GD+Y TP + + + ++ ++ S+ ++ E+++ ++
Sbjct: 171 TFSSGKPEKMVQKCLNDLGLGGDKY-TPARVINRSMGKKFRNFYKCSRGRKRKEREELDV 229
Query: 729 FQLTKEVXELRLYKTSICSPDE 794
LT E + RLY IC E
Sbjct: 230 DILTFEKFQ-RLY-NKICPRTE 249
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 5.3
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +3
Query: 558 TTFSGRSMRYVLHCSSHAGLAGDEYLTPTQRAQKQI-RRLKSM--LSQAKRDLEKKDSEI 728
T SG+ + V C + GL GD+Y TP + + + ++ ++ S+ ++ E+++ ++
Sbjct: 171 TFSSGKPEKMVQKCLNDLGLGGDKY-TPARVINRSMGKKFRNFYKCSRGRKRKEREELDV 229
Query: 729 FQLTKEVXELRLYKTSICSPDE 794
LT E + RLY IC E
Sbjct: 230 DILTFEKFQ-RLY-NKICPRTE 249
>U97196-11|AAB52464.1| 273|Caenorhabditis elegans Hypothetical
protein B0207.11 protein.
Length = 273
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -2
Query: 316 REPSLRCFCGVFSVIIGINFLVQSGERCT--IFSPRSRSDELRRKLPL 179
R +L + GV ++ N L + GE +F+P R D + KLPL
Sbjct: 132 RSEALSAYIGVATLNDAENHLTRRGEFALYHLFNPNGRLDTITEKLPL 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,261,690
Number of Sequences: 27780
Number of extensions: 352638
Number of successful extensions: 1157
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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