Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M18
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    24   1.5  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    24   1.5  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    24   1.5  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   4.5  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   4.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   5.9  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   5.9  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 330 GHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSAH 449
           GH  +S   N   + K   +C +T D C D  +S  +S H
Sbjct: 38  GHGNKSSGPNELGRFKHTDACCRTHDMCPD-VMSAGESKH 76


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 330 GHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSAH 449
           GH  +S   N   + K   +C +T D C D  +S  +S H
Sbjct: 43  GHGNKSSGPNELGRFKHTDACCRTHDMCPD-VMSAGESKH 81


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 330 GHRQRSHSFNSNAQQKPKKSCLKTQDACIDRNLSMTDSAH 449
           GH  +S   N   + K   +C +T D C D  +S  +S H
Sbjct: 43  GHGNKSSGPNELGRFKHTDACCRTHDMCPD-VMSAGESKH 81


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 150 GVPRXXYCSXYSFASIXHISTFHC 79
           G  +  YC   S+    HI+  HC
Sbjct: 86  GFSKECYCCRESYLKERHITLHHC 109


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -3

Query: 150 GVPRXXYCSXYSFASIXHISTFHC 79
           G  +  YC   S+    HI+  HC
Sbjct: 86  GFSKECYCCRESYLKERHITLHHC 109


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 580 IDLPLNVVPLNGAYPASTEAAVAAL 506
           +D PLN +P N  + A     + AL
Sbjct: 69  MDTPLNELPANKRFQAHCAGVITAL 93


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 580 IDLPLNVVPLNGAYPASTEAAVAAL 506
           +D PLN +P N  + A     + AL
Sbjct: 69  MDTPLNELPANKRFQAHCAGVITAL 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,190
Number of Sequences: 438
Number of extensions: 3812
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)