Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M17
         (837 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D55C7C Cluster: PREDICTED: similar to CG4552-PA;...    46   0.001
UniRef50_UPI00015B5759 Cluster: PREDICTED: similar to conserved ...    40   0.059
UniRef50_UPI000051A734 Cluster: PREDICTED: similar to CG4552-PA;...    40   0.10 
UniRef50_Q9VPW9 Cluster: CG4552-PA; n=5; Diptera|Rep: CG4552-PA ...    36   0.95 
UniRef50_Q4SD87 Cluster: Chromosome 1 SCAF14641, whole genome sh...    35   2.9  
UniRef50_Q01FQ2 Cluster: Predicted short chain-type dehydrogenas...    34   5.1  

>UniRef50_UPI0000D55C7C Cluster: PREDICTED: similar to CG4552-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG4552-PA - Tribolium castaneum
          Length = 669

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +1

Query: 7   ADVDRFLIPNASVATKVVSNQIVQQLDNK 93
           +D+DRFLIPNA  ATKVVS QI++QL NK
Sbjct: 640 SDMDRFLIPNADKATKVVSEQILKQLKNK 668


>UniRef50_UPI00015B5759 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 674

 Score = 40.3 bits (90), Expect = 0.059
 Identities = 17/26 (65%), Positives = 24/26 (92%)
 Frame = +1

Query: 7   ADVDRFLIPNASVATKVVSNQIVQQL 84
           +D+DRFLIPNAS ATK++S +I++QL
Sbjct: 645 SDMDRFLIPNASEATKLISQKIMKQL 670


>UniRef50_UPI000051A734 Cluster: PREDICTED: similar to CG4552-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to CG4552-PA
           - Apis mellifera
          Length = 648

 Score = 39.5 bits (88), Expect = 0.10
 Identities = 16/26 (61%), Positives = 24/26 (92%)
 Frame = +1

Query: 7   ADVDRFLIPNASVATKVVSNQIVQQL 84
           +D+D+FLIPNAS ATK+++ QI++QL
Sbjct: 619 SDMDKFLIPNASEATKLITQQILKQL 644


>UniRef50_Q9VPW9 Cluster: CG4552-PA; n=5; Diptera|Rep: CG4552-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 689

 Score = 36.3 bits (80), Expect = 0.95
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 10  DVDRFLIPNASVATKVVSNQIVQQLDN 90
           D+DRFLIPNA+  T ++S  IVQ LD+
Sbjct: 661 DMDRFLIPNAAEVTALISRLIVQVLDD 687


>UniRef50_Q4SD87 Cluster: Chromosome 1 SCAF14641, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 1
           SCAF14641, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 730

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           V+R+LIPNA  ATKV+  QI++ LD
Sbjct: 702 VERYLIPNAGDATKVIKQQIMKVLD 726


>UniRef50_Q01FQ2 Cluster: Predicted short chain-type dehydrogenase;
           n=2; Ostreococcus|Rep: Predicted short chain-type
           dehydrogenase - Ostreococcus tauri
          Length = 311

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
 Frame = -2

Query: 716 LVRLCFIEMNVKYH-VILLCLHLTVLFQPLADVIKTNNPEIKLFIIKMTIKQFISI 552
           L R C IE + K H +I +C+H   +   L++  K N P  KLF  + ++++ + +
Sbjct: 234 LTRNCSIEFSRKKHPIIAMCVHPGTVDTKLSEPFKKNVPADKLFTPEYSVQRLLEV 289


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,669,262
Number of Sequences: 1657284
Number of extensions: 13050321
Number of successful extensions: 25696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25691
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)