Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M17
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC020955-1|AAH20955.1|  547|Homo sapiens TBC1D23 protein protein.      33   1.7  
BC010221-1|AAH10221.1|  320|Homo sapiens TBC1D23 protein protein.      33   1.7  
AY740521-1|AAW66944.1|  320|Homo sapiens HCV nonstructural prote...    33   1.7  
AL713684-1|CAD28488.1|  393|Homo sapiens hypothetical protein pr...    33   1.7  
AK001908-1|BAA91973.1|  684|Homo sapiens protein ( Homo sapiens ...    33   1.7  
AK001750-1|BAA91881.1|  532|Homo sapiens protein ( Homo sapiens ...    33   1.7  

>BC020955-1|AAH20955.1|  547|Homo sapiens TBC1D23 protein protein.
          Length = 547

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           ++R+LIPNA  ATK +  QI++ LD
Sbjct: 519 IERYLIPNAGDATKAIKQQIMKVLD 543


>BC010221-1|AAH10221.1|  320|Homo sapiens TBC1D23 protein protein.
          Length = 320

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           ++R+LIPNA  ATK +  QI++ LD
Sbjct: 292 IERYLIPNAGDATKAIKQQIMKVLD 316


>AY740521-1|AAW66944.1|  320|Homo sapiens HCV nonstructural protein
           4A-transactivated protein 1 protein.
          Length = 320

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           ++R+LIPNA  ATK +  QI++ LD
Sbjct: 292 IERYLIPNAGDATKAIKQQIMKVLD 316


>AL713684-1|CAD28488.1|  393|Homo sapiens hypothetical protein
           protein.
          Length = 393

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           ++R+LIPNA  ATK +  QI++ LD
Sbjct: 365 IERYLIPNAGDATKAIKQQIMKVLD 389


>AK001908-1|BAA91973.1|  684|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11046 fis, clone PLACE1004473. ).
          Length = 684

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           ++R+LIPNA  ATK +  QI++ LD
Sbjct: 656 IERYLIPNAGDATKAIKQQIMKVLD 680


>AK001750-1|BAA91881.1|  532|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10888 fis, clone NT2RP4002052. ).
          Length = 532

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 13  VDRFLIPNASVATKVVSNQIVQQLD 87
           ++R+LIPNA  ATK +  QI++ LD
Sbjct: 504 IERYLIPNAGDATKAIKQQIMKVLD 528


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,094,017
Number of Sequences: 237096
Number of extensions: 1959662
Number of successful extensions: 2693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2693
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)