Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M16
(841 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 338 3e-93
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.1
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.1
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 29 4.1
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.1
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 7.2
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 338 bits (831), Expect = 3e-93
Identities = 152/242 (62%), Positives = 196/242 (80%)
Frame = +3
Query: 111 RXAKAPWXSXXFVKLIQLLDXYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 290
R ++ W + F KL++L + YPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM+R
Sbjct: 3 REDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIR 62
Query: 291 KAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVV 470
KA++ HL NP+LEKLLPHI NVGFVFT+ DL E+R KLLEN+ APA+ GAIAP V
Sbjct: 63 KALRGHLGKNPSLEKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVK 122
Query: 471 IPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISP 650
+P NTG+GPEKTSFFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNML ++P
Sbjct: 123 LPPQNTGMGPEKTSFFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTP 182
Query: 651 FSYGLVVKQVYDSGTIFAPEILDIKPXDLRAKFQAGVANVXALSLAIGYPTIASXPHSIA 830
FSYGLVV+QVYD GT++ PE+LD+ +LR +F +GV NV ++SLA+ YPT+AS HS+A
Sbjct: 183 FSYGLVVRQVYDDGTLYTPEVLDMTTEELRKRFLSGVRNVASVSLAVNYPTLASVAHSLA 242
Query: 831 NG 836
NG
Sbjct: 243 NG 244
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 58.8 bits (136), Expect = 4e-09
Identities = 44/173 (25%), Positives = 73/173 (42%), Gaps = 3/173 (1%)
Frame = +3
Query: 165 LDXYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPA--LEKL 338
+D Y FI N+ S + IR + +S GKN ++ A+ + A L K
Sbjct: 34 VDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKA 93
Query: 339 LPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSF 515
+KG G +FT EV + E + AR G +A +VV+P +
Sbjct: 94 SAILKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQ 153
Query: 516 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVK 674
+ L +PTK+ KG I + + K G+ + +A +L + + L+ K
Sbjct: 154 LRKLGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206
>Z82286-2|CAB05306.1| 397|Caenorhabditis elegans Hypothetical
protein W02A2.3 protein.
Length = 397
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 2/74 (2%)
Frame = +1
Query: 262 CSWEKTL*CAKP-SKTTWTTIQPSRNCCHTSRATLASCSPAET-SWRSVTNCWRTKSKLQ 435
CSW P S+T + QP+ N R C+P +S W T S+
Sbjct: 273 CSWMIDPLATDPQSRTHYLQCQPAPNNLFCGRWQRMPCAPGTVFDVQSQVCVWDTNSQPG 332
Query: 436 LVPVPLPHCQSSFP 477
+P P P+ + P
Sbjct: 333 TLPTPAPYVSTQAP 346
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 319 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 456
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 319 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 456
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 319 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 456
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 319 IQPSRNCCHTSRATLASCSPAETSWRSVTNCWRTKSKLQLVPVPLP 456
+ P RN CH S SP +SW + T+ ++K VP P P
Sbjct: 116 VSPMRNSCHPSNN-----SPPPSSWYAPTSYSQSKETPVFVPPPPP 156
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 469 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 359
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 408 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 557
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,710,441
Number of Sequences: 27780
Number of extensions: 459102
Number of successful extensions: 1334
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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