Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M15
         (891 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g13080.1 68414.m01516 cytochrome P450 family protein identica...    31   1.4  
At4g04545.1 68417.m00665 Ulp1 protease family protein contains P...    30   1.8  
At5g61140.1 68418.m07670 DEAD box RNA helicase, putative similar...    29   5.5  
At1g79680.1 68414.m09293 wall-associated kinase, putative simila...    29   5.5  
At1g71260.1 68414.m08224 expressed protein                             28   7.2  
At1g69260.1 68414.m07939 expressed protein                             28   7.2  
At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containi...    28   9.6  
At3g50050.1 68416.m05472 aspartyl protease family protein contai...    28   9.6  

>At1g13080.1 68414.m01516 cytochrome P450 family protein identical
           to gb|D78605 cytochrome P450 monooxygenase from
           Arabidopsis thaliana and is a member of the PF|00067
           Cytochrome P450 family. ESTs gb|Z18072, gb|Z35218 and
           gb|T43466 come from this gene
          Length = 502

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
 Frame = +1

Query: 295 LNSVTGAPRYC-HKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSAKVKSCAV 471
           L+ + G P  C HK+ +K G +V   L   P        VV ++S+ A     K      
Sbjct: 44  LHHLAGLPHRCFHKLSIKYGPLVFLRLGSVP--------VVVISSSEAAEAVLKTNDLEC 95

Query: 472 CNKDNCNGAGSISFSLPLATFALIATYF 555
           C++    G+G +S+     TFA    Y+
Sbjct: 96  CSRPKTVGSGKLSYGFKDITFAPYGEYW 123


>At4g04545.1 68417.m00665 Ulp1 protease family protein contains Pfam
           profile PF02902: Ulp1 protease family, C-terminal
           catalytic domain
          Length = 882

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 432 GVGGELDNSAGVLGIV---GVDIQASTDNSSALHDDLVTVSRSSRNAVQDFDRQNVAQVE 262
           G+ G  D+ AGV GI+   GV     TD    +  D  +  R  + +  D D Q+   ++
Sbjct: 442 GLAGGSDSVAGVCGIIGGLGVLDGIKTDTLKEVRGDDASQKRRKKKSSSDMDAQSTRPLK 501

Query: 261 RIE 253
           R++
Sbjct: 502 RVK 504


>At5g61140.1 68418.m07670 DEAD box RNA helicase, putative similar to
            ASC-1 complex subunit P200 [Homo sapiens] GI:12061185;
            contains Pfam profiles PF00270: DEAD/DEAH box helicase,
            PF00271: Helicase conserved C-terminal domain, PF02889:
            Sec63 domain
          Length = 2146

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 862  TFLFRKLKWNFRYCFKQXCEXYQVFFKISSLMNNIFVRVDGDRCMKMN*DS 710
            T+LFR+L  N  Y   +  +   +   +S L+   F  ++   C+K+N DS
Sbjct: 1775 TYLFRRLMANPAYYGLEGTQDETICSYLSRLVQTTFEDLEDSGCLKVNEDS 1825


>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
           to wall-associated kinase 2 GI:4826399 from [Arabidopsis
           thaliana]
          Length = 769

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +1

Query: 418 LASNTAIADSAKVKSCAVCNKDNCNGAGSISFSLP 522
           L  N    DS   K+ ++ N  +CNG G    SLP
Sbjct: 168 LYCNARYGDSEYCKNISIMNDTSCNGIGCCKASLP 202


>At1g71260.1 68414.m08224 expressed protein
          Length = 238

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 631 VGLGVPNSVLSAPNLVLTEKNSKEFIVNLSSFSYICPHL 747
           + L V NS+L   +  +      EF V  ++FS+  PH+
Sbjct: 165 ISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHI 203


>At1g69260.1 68414.m07939 expressed protein
          Length = 345

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = -1

Query: 525 QWEREGNRSSSVTVVLVAHSAGLDLRAVSDRGVGGELDNSAGVLGIVG-VDIQASTDNSS 349
           +W    N+S     +L  HSAGLD   VS   +GG    +AG    V  ++ +AS+D + 
Sbjct: 179 RWSATANKSG----LLRQHSAGLDSLQVSGESLGG--GRAAGSSSSVSELETKASSDEAR 232

Query: 348 AL 343
           +L
Sbjct: 233 SL 234


>At4g21170.1 68417.m03062 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 534

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 16/62 (25%), Positives = 29/62 (46%)
 Frame = +1

Query: 271 RNILPVEVLNSVTGAPRYCHKIVMKSGTVVRTCLDVNPNDSQHTCRVVELASNTAIADSA 450
           R+ L   V   +    R C K  +      +T L   P+   H CRV+E+A+ + + + A
Sbjct: 64  RSTLTSPVFLQILRETRKCPKTTLDFFDFAKTHLRFEPDLKSH-CRVIEVAAESGLLERA 122

Query: 451 KV 456
           ++
Sbjct: 123 EM 124


>At3g50050.1 68416.m05472 aspartyl protease family protein contains
           Pfam PF00026: Eukaryotic aspartyl protease
          Length = 632

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +1

Query: 148 CIKCYQCNSEQDKNCGDPFKSAKPPVECN 234
           C  C QC   QD        S   PV+CN
Sbjct: 121 CSDCEQCGKHQDPKFQPEMSSTYQPVKCN 149


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,023,119
Number of Sequences: 28952
Number of extensions: 360674
Number of successful extensions: 870
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)