Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M13
         (809 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...   254   8e-70
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.8  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score =  254 bits (621), Expect = 8e-70
 Identities = 110/195 (56%), Positives = 152/195 (77%)
 Frame = +3

Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
           M+ANQF++F + +ID ++ Y ENIRD  VLP+VEPGYL   +P +AP++P+ W+D+M D 
Sbjct: 1   MEANQFKDFAKEMIDYVSGYLENIRDRRVLPTVEPGYLRPLIPATAPQKPDKWEDVMADI 60

Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
            + IMPGVTHW SP+FHA++P+ +S+ +I+ ++LS  +A +GFSW+ASPACTELEVV ++
Sbjct: 61  ERVIMPGVTHWHSPRFHAYFPTANSYPAIVADILSGAIACIGFSWIASPACTELEVVMLD 120

Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENEIK 692
           WLGK++ LPE+FL CS G GGGVIQG+ASEATLV LL AK + + R     P++ ++EI 
Sbjct: 121 WLGKMIGLPEDFLACSGGKGGGVIQGTASEATLVALLGAKARMIDRVKKEKPEMSDSEIV 180

Query: 693 AKLVXYTSDQCNSSV 737
           AKLV YTS Q +SSV
Sbjct: 181 AKLVAYTSAQSHSSV 195


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 41  TFRINVTHWPHCDCCVFNDSNLTQI 115
           TF I +T + +C    FN  NLT +
Sbjct: 243 TFSICITQFYYCYDSGFNSDNLTDV 267


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -3

Query: 390 RMHGTAEIASVLHPALLID*NLSLCLSNPPV 298
           R+ G  +   +   A L D  ++  LSNPP+
Sbjct: 306 RVGGNNQFTMMEEQAFLYDSTITAPLSNPPL 336


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 234 HNPLCFQRSSPTYR*LLCRIPE 169
           H+   FQRS  T+   + R+PE
Sbjct: 178 HSHSGFQRSDGTFGPFIVRVPE 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,725
Number of Sequences: 336
Number of extensions: 4440
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22102797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)