Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M13
(809 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0855 - 32494491-32496092 159 2e-39
08_01_0277 - 2262557-2264128 158 4e-39
08_01_0275 + 2249794-2251338 154 9e-38
10_07_0005 - 11744073-11745653 153 1e-37
10_07_0115 - 13008835-13008877,13009117-13010621 153 2e-37
05_06_0036 - 25090942-25092639 146 2e-35
07_03_0164 + 14616156-14616225,14616409-14616477,14617672-146179... 142 2e-34
11_01_0318 - 2373511-2375073 31 1.4
07_03_0103 - 13425411-13425713,13425874-13425974,13426410-134264... 31 1.4
03_01_0280 + 2152000-2153510,2153633-2153732 30 1.9
08_02_0828 - 21596570-21597337 29 3.3
06_01_0001 - 18456-18521,18692-18874,19046-19153,19337-19396,197... 29 3.3
12_01_0324 - 2467104-2468633 29 4.4
04_04_0489 + 25600543-25601368,25601441-25602282 29 5.8
07_02_0018 - 11820465-11821508,11822684-11823661 28 7.6
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 28 7.6
04_03_0421 - 15725045-15725193,15725528-15725599,15725709-157257... 28 7.6
01_03_0208 + 13797780-13797931,13798234-13798288,13798807-13799943 28 7.6
>01_06_0855 - 32494491-32496092
Length = 533
Score = 159 bits (386), Expect = 2e-39
Identities = 77/166 (46%), Positives = 106/166 (63%), Gaps = 2/166 (1%)
Frame = +3
Query: 147 LNMDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPED--WKDI 320
L +DA++FR G V+D +A Y + DY V PSV PG+L R LP AP +PE +
Sbjct: 37 LLLDADEFRRLGHQVVDFIADYYAGLGDYPVHPSVTPGFLRRQLPADAPSRPEPEAFAAA 96
Query: 321 MKDFNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEV 500
++D I+PGVTHWQSP+ A +P+ SS +G L+ G+ VV F+W ASPA TELE+
Sbjct: 97 LRDVRDLILPGVTHWQSPRHFAHFPASSSTVGALGEALAAGINVVPFTWAASPAATELEM 156
Query: 501 VTMNWLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDK 638
V ++WLG+ L LPE L +G GGG I G++ EA L L+ A+D+
Sbjct: 157 VVVDWLGRALHLPESLL--FAGGGGGTILGTSCEAVLCALVAARDR 200
>08_01_0277 - 2262557-2264128
Length = 523
Score = 158 bits (384), Expect = 4e-39
Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 4/174 (2%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
+DA+ R + +D + Y +++ VLP VEPGYLLR L + P + MK+
Sbjct: 25 LDADDVRSYLHKAVDFVYDYYKSVESLPVLPGVEPGYLLRLLQSAPPSSSAPFDIAMKEL 84
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
++++PG+THW SP F AF+P+ +S A+I G +++ + VGF+W A+PA TELEV+ ++
Sbjct: 85 REAVVPGMTHWASPNFFAFFPATNSAAAIAGELIASAMNTVGFTWQAAPAATELEVLALD 144
Query: 513 WLGKLLDLPEEFLNCS----SGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNN 662
WL +LL LP F+N + G GGGVI G+ SEA LV L+ A+D +RR +N
Sbjct: 145 WLAQLLGLPASFMNRTVAGGRGTGGGVILGTTSEAMLVTLVAARDAALRRSGSN 198
>08_01_0275 + 2249794-2251338
Length = 514
Score = 154 bits (373), Expect = 9e-38
Identities = 70/169 (41%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
++A+ R + +D ++ Y +++ VLP+V+PGYL L S P + MK+
Sbjct: 25 LNADDVRSYLHKAVDFISDYYKSVESMPVLPNVKPGYLQDELRASPPTYSAPFDVTMKEL 84
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
S++PG+THW SP F AF+PS +S A+I G++++ + VGF+W ASPA TE+EV+ ++
Sbjct: 85 RSSVVPGMTHWASPNFFAFFPSTNSAAAIAGDLIASAMNTVGFTWQASPAATEMEVLALD 144
Query: 513 WLGKLLDLPEEFLNCSS---GPGGGVIQGSASEATLVGLLVAKDKTVRR 650
WL ++L+LP F+N + G GGGVI G+ SEA LV L+ A+D +RR
Sbjct: 145 WLAQMLNLPTSFMNRTGEGRGTGGGVILGTTSEAMLVTLVAARDAALRR 193
>10_07_0005 - 11744073-11745653
Length = 526
Score = 153 bits (372), Expect = 1e-37
Identities = 82/192 (42%), Positives = 115/192 (59%), Gaps = 2/192 (1%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPE--QPEDWKDIMK 326
+DA++FR GR V+D++A Y + +Y V P+V PG+L LP P +P+ + M+
Sbjct: 34 LDADEFRRQGRLVVDLIADYYAGMGEYPVHPTVSPGFLRHRLPAEPPSRREPDAFAAAMQ 93
Query: 327 DFNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVT 506
D I+PG+THWQSP+ A +P+ SS A +G L+ G+ VV F+W ASPA TELE+V
Sbjct: 94 DVRDVILPGLTHWQSPRHFAHFPASSSTAGALGEALAAGINVVPFTWAASPAATELEMVV 153
Query: 507 MNWLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENE 686
++WLGK L LPE L +G GGG I G+ EA L L+ A+D+ + + E
Sbjct: 154 VDWLGKALHLPERLL--FAGGGGGSILGTTCEAILCALVAARDRKLAA-------IGEGR 204
Query: 687 IKAKLVXYTSDQ 722
I LV Y SDQ
Sbjct: 205 I-GDLVVYCSDQ 215
>10_07_0115 - 13008835-13008877,13009117-13010621
Length = 515
Score = 153 bits (370), Expect = 2e-37
Identities = 84/200 (42%), Positives = 117/200 (58%), Gaps = 6/200 (3%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPS-VEPGYLLRALPESAPEQPEDWKDIMKD 329
+D + F AV+D LA Y ++ Y V + +EPG L R LPE+APE E + I+ D
Sbjct: 12 LDPDTFAADSSAVVDFLAGYYRDVDKYPVRAADLEPGRLRRLLPEAAPEFGEPAERILAD 71
Query: 330 FNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTM 509
+ ++PG+THWQSP F A++P +S A G MLS GL VV F W+ASPA ELE V +
Sbjct: 72 VRRDVLPGLTHWQSPSFFAYFPMNASAAGFAGEMLSVGLNVVPFMWVASPAAVELEAVVV 131
Query: 510 NWLGKLLDLPEEFLNCSS-----GPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDL 674
+W+ +L+ LP+ FL S G GGGV+QGS EA + L A+D+ + R
Sbjct: 132 DWMARLVGLPDRFLFSGSGGGGGGGGGGVLQGSTCEAVVCTLAAARDRALGRI------- 184
Query: 675 DENEIKAKLVXYTSDQCNSS 734
+E KLV Y SDQ +++
Sbjct: 185 -GHEGIVKLVVYASDQTHAT 203
>05_06_0036 - 25090942-25092639
Length = 565
Score = 146 bits (353), Expect = 2e-35
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPED--WKDIMK 326
+DA +FR GR V+D +A Y I DY V P+V PG+L LP +AP PE ++
Sbjct: 25 LDAGEFRRQGRQVVDFIADYYAGINDYPVRPAVAPGFLAGKLPATAPSTPEPDALTAGLR 84
Query: 327 DFNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVT 506
D + ++PG+THWQSP+ A + + +S +G L+ GL V F+W ASPA TELEVV
Sbjct: 85 DVRELMLPGLTHWQSPRHFAHFSATASNVGALGEALAAGLNVNPFTWEASPAATELEVVV 144
Query: 507 MNWLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENE 686
+WLGK L LPE L +G GGG + G++ EA L ++ A+D+ + ++ E
Sbjct: 145 TDWLGKALHLPERLL--FAGGGGGTLLGTSCEAMLCTIVAARDEKL-------AEIGEER 195
Query: 687 IKAKLVXYTSDQCNSS 734
I LV Y SDQ + S
Sbjct: 196 I-GDLVVYCSDQTHFS 210
>07_03_0164 +
14616156-14616225,14616409-14616477,14617672-14617902,
14618394-14618557,14618795-14618935,14619632-14619691,
14620358-14620522,14620676-14620732,14621084-14621148,
14622235-14622358,14622469-14622606,14622705-14622830
Length = 469
Score = 142 bits (345), Expect = 2e-34
Identities = 69/141 (48%), Positives = 96/141 (68%)
Frame = +3
Query: 315 DIMKDFNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTEL 494
+++ D Q I+PGVTHWQSP + A+YPS SS A +G MLS +VGFSW+ SPA TEL
Sbjct: 43 NLVADIQQKIIPGVTHWQSPNYFAYYPSNSSTAGFLGEMLSAAFNIVGFSWITSPAATEL 102
Query: 495 EVVTMNWLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDL 674
EV+ ++W K+L LP +FL S+ GGGVIQG+ASEA LV LL A+D+ +++ ++ +
Sbjct: 103 EVIVLDWFAKMLQLPSQFL--STALGGGVIQGTASEAVLVALLAARDRALKKHGKHSLE- 159
Query: 675 DENEIKAKLVXYTSDQCNSSV 737
KLV Y SDQ +S++
Sbjct: 160 -------KLVVYASDQTHSAL 173
>11_01_0318 - 2373511-2375073
Length = 520
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 354 VTHWQSPQFHAFYPSGSSFASIIGNMLSDGL-AVVGFSWMASPACTELEV 500
V H +F F P G FA+++G++L DG+ V G +W LE+
Sbjct: 99 VEHMLRTRFDNF-PKGRPFAALLGDLLGDGIFNVDGHAWRHQRKMASLEL 147
>07_03_0103 -
13425411-13425713,13425874-13425974,13426410-13426471,
13426951-13427123
Length = 212
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = -2
Query: 637 LSLATSNPTKVASLADP*ITPPPGPEEQFRNSSGKSNSLPSQFIVTTSSSVHA-----GL 473
L ++ PT+ LA+ +TPP ++ R + S S+ ++ +S++ H GL
Sbjct: 81 LGVSKGTPTQQQKLAESILTPPEHQKKSTRAEESLALSPRSETVLNSSATTHTDPYSEGL 140
Query: 472 AIQLNP-TTAKPSLSIF 425
AI P PS+ +F
Sbjct: 141 AIPRAPDDIGTPSIDLF 157
>03_01_0280 + 2152000-2153510,2153633-2153732
Length = 536
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 384 AFYPSGSSFASIIGNMLSDGL-AVVGFSWMASPACTEL 494
A YP G FA I + L DG+ V G SW A T+L
Sbjct: 99 ANYPKGPDFAEIFDDTLGDGIFNVDGDSWRRQRAKTQL 136
>08_02_0828 - 21596570-21597337
Length = 255
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -2
Query: 583 ITPPPGPEEQFRNSSGKSNSLPSQFIVTTSSSVHAGLAIQLNPTTAKPSLSIFP 422
I P PEE + SGKSNS TTS+ + ++ T KP ++ P
Sbjct: 178 INKKPRPEEDYALCSGKSNSTSRTMKTTTSAQM---ISKPHTETVVKPPPALLP 228
>06_01_0001 -
18456-18521,18692-18874,19046-19153,19337-19396,
19755-19937,20109-20291,20816-20998,21170-21352,
21524-21581,21878-21935,22586-22643,22938-22995,
23292-23349,23998-24007
Length = 482
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 139 TRTLESNLNLSQIRIIKNTAIAMWPMCNVNSECKDTR 29
T +L+++ S IR T A WPMC TR
Sbjct: 375 TTSLKTSCGPSDIRCFAETTAASWPMCRARQPTLTTR 411
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 139 TRTLESNLNLSQIRIIKNTAIAMWPMCNVNSECKDTR 29
T +L+++ S IR T A WPMC TR
Sbjct: 136 TTSLKTSCGPSDIRRFAETTAASWPMCRARQPTLTTR 172
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -2
Query: 139 TRTLESNLNLSQIRIIKNTAIAMWPMCNVNSECKDTR 29
T +L+++ S IR T A WPMC TR
Sbjct: 197 TTSLKTSCGPSDIRRFAETTAASWPMCRARQPTLTTR 233
>12_01_0324 - 2467104-2468633
Length = 509
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 390 YPSGSSFASIIGNMLSDGL-AVVGFSWMASPACTELEV 500
+P G FA+++G++L DG+ V G +W LE+
Sbjct: 102 FPKGRPFAALLGDLLGDGIFNVDGDAWRHQRKMASLEL 139
>04_04_0489 + 25600543-25601368,25601441-25602282
Length = 555
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 162 NQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDI 320
N +++G+ + S ++ DYD P VEP L R E+ PE D +++
Sbjct: 129 NPTKKYGKGGVGKFESSYDSDSDYDTGPPVEP-KLERGTGEAEPEAVVDVEEV 180
>07_02_0018 - 11820465-11821508,11822684-11823661
Length = 673
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = -2
Query: 607 VASLADP*ITPPPGPEEQFRNSSGKSNSLPSQFIVTTSSSVHAGLAIQLNPT 452
+ SL +P TPP P F + S+PS TT+SS+ A ++P+
Sbjct: 7 MTSLPNPLPTPPAHPSPAFNPQRQRERSVPSP--TTTASSLRALFLRAVDPS 56
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -2
Query: 580 TPPPGPEEQFRNSSGKSNSLPSQFIVTTSSSVHAGLAIQLNPTTAKPSLS 431
+PPP ++Q S GKS S + SSS A A+ PT +P ++
Sbjct: 20 SPPPPIDQQAAESLGKSPSASDLTALHASSSSSAADALLDAPTRRQPPVA 69
>04_03_0421 -
15725045-15725193,15725528-15725599,15725709-15725784,
15728607-15728679,15728919-15728983,15729423-15729681,
15729761-15729931,15730014-15730846,15731097-15731390,
15731469-15731939
Length = 820
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 387 FYPSGSSFASIIGNMLSDGLAVVG 458
F GS S+ GN+ SDGLA VG
Sbjct: 696 FMGDGSEETSVTGNLTSDGLANVG 719
>01_03_0208 + 13797780-13797931,13798234-13798288,13798807-13799943
Length = 447
Score = 28.3 bits (60), Expect = 7.6
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -2
Query: 553 FRNSSGKSNSLPSQFIVTTSSSVHAGLAIQLNPTTAKPS 437
F NSS S FIV T S+V AGLA +L KPS
Sbjct: 372 FSNSS-TSGGYTHAFIVLTGSAVLAGLAWRLITHVKKPS 409
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,719,480
Number of Sequences: 37544
Number of extensions: 466455
Number of successful extensions: 1350
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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