Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M13
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...   246   8e-67
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...   246   8e-67
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   2.1  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   2.8  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score =  246 bits (601), Expect = 8e-67
 Identities = 106/195 (54%), Positives = 151/195 (77%)
 Frame = +3

Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
           M A +F++F + ++D +++Y ENIRD  VLP+V+PGYL   +P+ AP+QPE W+++M D 
Sbjct: 11  MQAPEFKDFAKEMVDYISNYLENIRDRRVLPTVQPGYLRPLIPDEAPQQPEKWEEVMADV 70

Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
            + IMPGVTHW SP+FHA++P+ +S+ +I+ +MLS  +A +GF+W+ASPACTELEVV ++
Sbjct: 71  ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMLD 130

Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENEIK 692
           WLGK+LDLP+EFL CS G GGGVIQG+AS+  L+GL   K K ++R    +PD D+N I 
Sbjct: 131 WLGKMLDLPKEFLACSGGQGGGVIQGTASDLALLGL---KAKAMKRVKEEHPDWDDNTIV 187

Query: 693 AKLVXYTSDQCNSSV 737
           +KLV YTS+Q +SSV
Sbjct: 188 SKLVGYTSNQSHSSV 202


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score =  246 bits (601), Expect = 8e-67
 Identities = 106/195 (54%), Positives = 151/195 (77%)
 Frame = +3

Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
           M A +F++F + ++D +++Y ENIRD  VLP+V+PGYL   +P+ AP+QPE W+++M D 
Sbjct: 42  MQAPEFKDFAKEMVDYISNYLENIRDRRVLPTVQPGYLRPLIPDEAPQQPEKWEEVMADV 101

Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
            + IMPGVTHW SP+FHA++P+ +S+ +I+ +MLS  +A +GF+W+ASPACTELEVV ++
Sbjct: 102 ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMLD 161

Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENEIK 692
           WLGK+LDLP+EFL CS G GGGVIQG+AS+  L+GL   K K ++R    +PD D+N I 
Sbjct: 162 WLGKMLDLPKEFLACSGGQGGGVIQGTASDLALLGL---KAKAMKRVKEEHPDWDDNTIV 218

Query: 693 AKLVXYTSDQCNSSV 737
           +KLV YTS+Q +SSV
Sbjct: 219 SKLVGYTSNQSHSSV 233


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +1

Query: 106 DSDLNLIRVFECL 144
           DSD+ L+R+FECL
Sbjct: 223 DSDVALLRIFECL 235


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 468 MASPACTELEVVTMNWLGKLLDLPEEFLNCSSGPGG 575
           + S  C  + ++  +    ++  PEE+LN   GP G
Sbjct: 5   ITSKVCALIFIILFSTYDSVVLYPEEYLNIILGPNG 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,067
Number of Sequences: 2352
Number of extensions: 17399
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)