Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M13
(809 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 208 4e-54
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 208 4e-54
Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical pr... 162 3e-40
AY669394-1|AAU05399.1| 487|Caenorhabditis elegans aromatic L-am... 160 1e-39
AY669393-1|AAU05398.1| 478|Caenorhabditis elegans aromatic L-am... 160 1e-39
AF047651-8|AAV58886.1| 514|Caenorhabditis elegans Biogenic amin... 160 1e-39
AF047651-7|AAC02721.2| 523|Caenorhabditis elegans Biogenic amin... 160 1e-39
AF047651-9|AAC02720.2| 509|Caenorhabditis elegans Hypothetical ... 152 3e-37
Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amin... 151 8e-37
AY669392-1|AAU05397.1| 158|Caenorhabditis elegans truncated aro... 144 9e-35
AY669391-1|AAU05396.1| 158|Caenorhabditis elegans truncated aro... 144 9e-35
Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical... 35 0.060
AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical... 35 0.060
AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid... 35 0.060
Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical pr... 30 1.7
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 29 3.0
Z82274-4|CAB05228.1| 429|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z82274-3|CAB05229.1| 435|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 29 5.2
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 29 5.2
AL032652-9|CAB76748.1| 267|Caenorhabditis elegans Hypothetical ... 29 5.2
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 29 5.2
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 29 5.2
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 29 5.2
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 29 5.2
AF067942-13|AAG45577.2| 386|Caenorhabditis elegans Hypothetical... 29 5.2
AF067942-12|AAT68887.1| 385|Caenorhabditis elegans Hypothetical... 29 5.2
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 29 5.2
Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical pr... 28 6.9
AF067211-4|AAC16995.1| 532|Caenorhabditis elegans Hypothetical ... 28 9.1
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 208 bits (508), Expect = 4e-54
Identities = 91/196 (46%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
M ++FR++G+ +D + Y ENI+ V+P++EPGYL +P AP PE ++ +M+DF
Sbjct: 77 MTRDEFRQYGKETVDYIVDYLENIQKRRVVPAIEPGYLKDLIPSEAPNTPESFESVMEDF 136
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
+ IMPG+THWQ P+FHA++P+G+SF SII +MLSD + VGFSW A PA TELE++ ++
Sbjct: 137 EKLIMPGITHWQHPRFHAYFPAGNSFPSIIADMLSDAIGCVGFSWAACPAMTELELIMLD 196
Query: 513 WLGKLLDLPEEFLNCS-SGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENEI 689
W GK++ LP EFL + +G GGGVIQ SASE V LL A+ + ++ P ++E +
Sbjct: 197 WFGKMIGLPAEFLPLTENGKGGGVIQSSASECNFVTLLAARFEVMKELRQRFPFVEEGLL 256
Query: 690 KAKLVXYTSDQCNSSV 737
+KL+ Y S + +SSV
Sbjct: 257 LSKLIAYCSKEAHSSV 272
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 208 bits (508), Expect = 4e-54
Identities = 91/196 (46%), Positives = 135/196 (68%), Gaps = 1/196 (0%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
M ++FR++G+ +D + Y ENI+ V+P++EPGYL +P AP PE ++ +M+DF
Sbjct: 77 MTRDEFRQYGKETVDYIVDYLENIQKRRVVPAIEPGYLKDLIPSEAPNTPESFESVMEDF 136
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
+ IMPG+THWQ P+FHA++P+G+SF SII +MLSD + VGFSW A PA TELE++ ++
Sbjct: 137 EKLIMPGITHWQHPRFHAYFPAGNSFPSIIADMLSDAIGCVGFSWAACPAMTELELIMLD 196
Query: 513 WLGKLLDLPEEFLNCS-SGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDENEI 689
W GK++ LP EFL + +G GGGVIQ SASE V LL A+ + ++ P ++E +
Sbjct: 197 WFGKMIGLPAEFLPLTENGKGGGVIQSSASECNFVTLLAARFEVMKELRQRFPFVEEGLL 256
Query: 690 KAKLVXYTSDQCNSSV 737
+KL+ Y S + +SSV
Sbjct: 257 LSKLIAYCSKEAHSSV 272
>Z73899-9|CAA98072.2| 905|Caenorhabditis elegans Hypothetical
protein ZK829.2 protein.
Length = 905
Score = 162 bits (393), Expect = 3e-40
Identities = 78/201 (38%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Frame = +3
Query: 138 VFVLNMDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKD 317
V V M +QFR + V+D L E+IR P+++PGYL LP AP++ ED D
Sbjct: 338 VDVNGMSRDQFRNAAKKVVDYLMKQDESIRAARCSPALKPGYLKALLPPKAPQKAEDIDD 397
Query: 318 IMKDFNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELE 497
I++D+++ I+PG++H P FH+FYP+G+SF ++ ++L + GF W ++PA TELE
Sbjct: 398 ILEDYHKLIVPGLSHSSHPNFHSFYPAGNSFHCLLADLLGGHIGDAGFYWTSNPALTELE 457
Query: 498 VVTMNWLGKLLDLPEEFLNC-SSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDL 674
V+ M+WLG+++ LP+EFL + GGG +Q S +E+ + L+ A+ +RR + L
Sbjct: 458 VLMMDWLGEMMALPKEFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRL 517
Query: 675 DENEIKAKLVXYTSDQCNSSV 737
++I A+LV YTS S+
Sbjct: 518 RSSDILARLVAYTSSDARRSI 538
>AY669394-1|AAU05399.1| 487|Caenorhabditis elegans aromatic L-amino
acid decarboxylase protein.
Length = 487
Score = 160 bits (388), Expect = 1e-39
Identities = 67/166 (40%), Positives = 107/166 (64%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G+ ++D +A Y + IRD LP V+PGY+ +P AP PEDW I D
Sbjct: 1 MDSQKLRTEGKKMLDFVADYWDGIRDRKPLPDVKPGYINDLVPAQAPATPEDWAKIFDDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
++ G THW P F A++P+ S+ SI+ ++LS G+A +GF+W + P+ TELE+ +++
Sbjct: 61 ENVVVNGATHWHHPHFFAYFPTALSYQSIMADILSGGIAGIGFTWKSCPSMTELEMSSLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRR 650
W+ L+ LPE F N +GPG G+IQ +AS++T++ ++ A+ V R
Sbjct: 121 WVVDLMGLPEHFKNSHNGPGCGIIQSTASDSTMIAIMAARATHVER 166
>AY669393-1|AAU05398.1| 478|Caenorhabditis elegans aromatic L-amino
acid decarboxylase protein.
Length = 478
Score = 160 bits (388), Expect = 1e-39
Identities = 67/166 (40%), Positives = 107/166 (64%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G+ ++D +A Y + IRD LP V+PGY+ +P AP PEDW I D
Sbjct: 1 MDSQKLRTEGKKMLDFVADYWDGIRDRKPLPDVKPGYINDLVPAQAPATPEDWAKIFDDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
++ G THW P F A++P+ S+ SI+ ++LS G+A +GF+W + P+ TELE+ +++
Sbjct: 61 ENVVVNGATHWHHPHFFAYFPTALSYQSIMADILSGGIAGIGFTWKSCPSMTELEMSSLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRR 650
W+ L+ LPE F N +GPG G+IQ +AS++T++ ++ A+ V R
Sbjct: 121 WVVDLMGLPEHFKNSHNGPGCGIIQSTASDSTMIAIMAARATHVER 166
>AF047651-8|AAV58886.1| 514|Caenorhabditis elegans Biogenic amine
synthesis relatedprotein 1, isoform a protein.
Length = 514
Score = 160 bits (388), Expect = 1e-39
Identities = 67/166 (40%), Positives = 107/166 (64%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G+ ++D +A Y + IRD LP V+PGY+ +P AP PEDW I D
Sbjct: 1 MDSQKLRTEGKKMLDFVADYWDGIRDRKPLPDVKPGYINDLVPAQAPATPEDWAKIFDDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
++ G THW P F A++P+ S+ SI+ ++LS G+A +GF+W + P+ TELE+ +++
Sbjct: 61 ENVVVNGATHWHHPHFFAYFPTALSYQSIMADILSGGIAGIGFTWKSCPSMTELEMSSLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRR 650
W+ L+ LPE F N +GPG G+IQ +AS++T++ ++ A+ V R
Sbjct: 121 WVVDLMGLPEHFKNSHNGPGCGIIQSTASDSTMIAIMAARATHVER 166
>AF047651-7|AAC02721.2| 523|Caenorhabditis elegans Biogenic amine
synthesis relatedprotein 1, isoform b protein.
Length = 523
Score = 160 bits (388), Expect = 1e-39
Identities = 67/166 (40%), Positives = 107/166 (64%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G+ ++D +A Y + IRD LP V+PGY+ +P AP PEDW I D
Sbjct: 1 MDSQKLRTEGKKMLDFVADYWDGIRDRKPLPDVKPGYINDLVPAQAPATPEDWAKIFDDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
++ G THW P F A++P+ S+ SI+ ++LS G+A +GF+W + P+ TELE+ +++
Sbjct: 61 ENVVVNGATHWHHPHFFAYFPTALSYQSIMADILSGGIAGIGFTWKSCPSMTELEMSSLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRR 650
W+ L+ LPE F N +GPG G+IQ +AS++T++ ++ A+ V R
Sbjct: 121 WVVDLMGLPEHFKNSHNGPGCGIIQSTASDSTMIAIMAARATHVER 166
>AF047651-9|AAC02720.2| 509|Caenorhabditis elegans Hypothetical
protein C05D2.3 protein.
Length = 509
Score = 152 bits (368), Expect = 3e-37
Identities = 67/172 (38%), Positives = 108/172 (62%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G+ +I+++A+Y + IR +P V+PGY+ +++P + P PE W+ + D
Sbjct: 1 MDSAKLRVEGKKMIEIVANYWDGIRTRKPIPDVKPGYIEKSVPSNPPTTPESWEKVFGDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
+ I G +HW P F A++ +G + SI+ +++S GL VGF+W+A P TELE +T++
Sbjct: 61 EKVIFNGSSHWNHPHFFAYFSAGIGYHSILADIISSGLGSVGFTWIACPPITELEKITLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNP 668
WL L LP EF N G G G+IQ SAS++TL+ ++ A+ V F+ NP
Sbjct: 121 WLVDLTSLPVEFKNSHPGHGCGIIQSSASDSTLIAIMTARAAKV-EFIKQNP 171
>Z11576-1|CAA77663.1| 625|Caenorhabditis elegans aromatic-L-amino
acid decarboxylaseprotein.
Length = 625
Score = 151 bits (365), Expect = 8e-37
Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 1/201 (0%)
Frame = +3
Query: 138 VFVLNMDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKD 317
V V M +QFR + V+D L E+IR P+++PGYL LP AP++ ED D
Sbjct: 58 VDVNGMSRDQFRNAAKKVVDYLMKQDESIRAARCSPALKPGYLKALLPPKAPQKAEDIDD 117
Query: 318 IMKDFNQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELE 497
I++D+++ I+PG++H S +F P+G+SF ++ ++L + GF W ++PA TELE
Sbjct: 118 ILEDYHKLIVPGLSHSSSSKFSFILPAGNSFHCLLADLLGGHIGDAGFYWTSNPALTELE 177
Query: 498 VVTMNWLGKLLDLPEEFLNC-SSGPGGGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDL 674
V+ M+WLG+++ LP+EFL + GGG +Q S +E+ + L+ A+ +RR + L
Sbjct: 178 VLMMDWLGEMMALPKEFLLFPEASRGGGCMQRSDTESNFLVLVAARTDMIRRMKQRDKRL 237
Query: 675 DENEIKAKLVXYTSDQCNSSV 737
++I A+LV YTS S+
Sbjct: 238 RSSDILARLVAYTSSDARRSI 258
>AY669392-1|AAU05397.1| 158|Caenorhabditis elegans truncated
aromatic L-amino aciddecarboxylase protein.
Length = 158
Score = 144 bits (348), Expect = 9e-35
Identities = 63/145 (43%), Positives = 93/145 (64%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G VID++A Y +R LP+V+PG++ +P + PE PE+W+ I D
Sbjct: 1 MDSQKLRTEGTRVIDIVADYWYGLRKRKPLPNVKPGFMTALVPSTPPEAPEEWEKIYGDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
+ + THW P F A++P+G ++ SI+ ++LS GL+ VGFSWMA P+ TELE V ++
Sbjct: 61 EKVVFNPATHWNHPHFFAYFPAGLAYHSIMADILSSGLSSVGFSWMACPSITELEKVMLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQ 587
W+ L+ LPE F N GPG G+IQ
Sbjct: 121 WVVTLMGLPEHFKNSHPGPGCGIIQ 145
>AY669391-1|AAU05396.1| 158|Caenorhabditis elegans truncated
aromatic L-amino aciddecarboxylase protein.
Length = 158
Score = 144 bits (348), Expect = 9e-35
Identities = 63/145 (43%), Positives = 93/145 (64%)
Frame = +3
Query: 153 MDANQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDF 332
MD+ + R G VID++A Y +R LP+V+PG++ +P + PE PE+W+ I D
Sbjct: 1 MDSQKLRTEGTRVIDIVADYWYGLRKRKPLPNVKPGFMTALVPSTPPEAPEEWEKIYGDL 60
Query: 333 NQSIMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMN 512
+ + THW P F A++P+G ++ SI+ ++LS GL+ VGFSWMA P+ TELE V ++
Sbjct: 61 EKVVFNPATHWNHPHFFAYFPAGLAYHSIMADILSSGLSSVGFSWMACPSITELEKVMLD 120
Query: 513 WLGKLLDLPEEFLNCSSGPGGGVIQ 587
W+ L+ LPE F N GPG G+IQ
Sbjct: 121 WVVTLMGLPEHFKNSHPGPGCGIIQ 145
>Z54235-7|CAA90974.3| 611|Caenorhabditis elegans Hypothetical
protein C09G9.4 protein.
Length = 611
Score = 54.0 bits (124), Expect = 1e-07
Identities = 30/127 (23%), Positives = 60/127 (47%)
Frame = +3
Query: 162 NQFREFGRAVIDMLASYAENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDFNQS 341
N+F + V+ + Y + V+P E + PE+ E+ +I+KD +
Sbjct: 117 NEFIKCMSLVVQFINDYFDESHKQPVIP--ENDVNSSRIHVKVPEKAEELTEILKDLKEI 174
Query: 342 IMPGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMNWLG 521
++P + H P++HA + +G S A ++ + +S A +G +SP +E + WL
Sbjct: 175 VIPNICHTHHPRYHAKF-AGKSLADLVASTIS---AALGHDVNSSPIIESIERIICKWLS 230
Query: 522 KLLDLPE 542
+ +P+
Sbjct: 231 TSMAIPQ 237
>AL032626-20|CAD45605.1| 445|Caenorhabditis elegans Hypothetical
protein Y37D8A.23b protein.
Length = 445
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 EFGRAVIDMLASYA--ENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDFNQSIM 347
EF ++ +L Y +N RD +L P + + S PE+PE ++K +
Sbjct: 33 EFLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMDLSIPEKPESLLKLVKSCEDVLR 92
Query: 348 PGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMNWLGKL 527
GV P+F G S+ G L+ F++ +P +E M + +
Sbjct: 93 LGV-RTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMARMWEA 151
Query: 528 LDLPEEFLNCSSGPGGGV 581
+ E + PGG +
Sbjct: 152 VGWDPEKADGIFAPGGAI 169
>AL032626-19|CAA21537.1| 508|Caenorhabditis elegans Hypothetical
protein Y37D8A.23a protein.
Length = 508
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 EFGRAVIDMLASYA--ENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDFNQSIM 347
EF ++ +L Y +N RD +L P + + S PE+PE ++K +
Sbjct: 33 EFLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMDLSIPEKPESLLKLVKSCEDVLR 92
Query: 348 PGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMNWLGKL 527
GV P+F G S+ G L+ F++ +P +E M + +
Sbjct: 93 LGV-RTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMARMWEA 151
Query: 528 LDLPEEFLNCSSGPGGGV 581
+ E + PGG +
Sbjct: 152 VGWDPEKADGIFAPGGAI 169
>AF109378-1|AAD19958.1| 508|Caenorhabditis elegans glutamic acid
decarboxylase protein.
Length = 508
Score = 35.1 bits (77), Expect = 0.060
Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Frame = +3
Query: 174 EFGRAVIDMLASYA--ENIRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDFNQSIM 347
EF ++ +L Y +N RD +L P + + S PE+PE ++K +
Sbjct: 33 EFLNRIVQVLLKYIKDQNDRDQKILEFHHPDKMQMLMDLSIPEKPESLLKLVKSCEDVLR 92
Query: 348 PGVTHWQSPQFHAFYPSGSSFASIIGNMLSDGLAVVGFSWMASPACTELEVVTMNWLGKL 527
GV P+F G S+ G L+ F++ +P +E M + +
Sbjct: 93 LGV-RTGHPRFFNQISCGLDLVSMAGEWLTATANTNMFTYEIAPVFILMEKSVMARMWEA 151
Query: 528 LDLPEEFLNCSSGPGGGV 581
+ E + PGG +
Sbjct: 152 VGWDPEKADGIFAPGGAI 169
>Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical
protein R17.2 protein.
Length = 628
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 288 APEQPEDWKDIMKDFNQSIMP 350
AP+QP WKDI+KD I P
Sbjct: 17 APQQPLSWKDILKDEQALITP 37
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +3
Query: 222 IRDYDVLPSVEPGYLLRALPESAPEQPEDWKDIMKDFNQSIMPGVT 359
I D D LPS PG + LPE+ PE ++ + + + S P VT
Sbjct: 2 ISDDDDLPSTRPGSVNEELPETEPEDNDELPETEPE-SDSDKPTVT 46
>Z82274-4|CAB05228.1| 429|Caenorhabditis elegans Hypothetical
protein JC8.6b protein.
Length = 429
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 144 VLNMDANQFREFGRAVIDMLASYAENIRDYDVLPSVE-PG 260
++NM+ REFGR + M+ + E +D D P+ + PG
Sbjct: 384 LINMEKLVLREFGRCLEQMITNTTELTQDLDAAPTDDIPG 423
>Z82274-3|CAB05229.1| 435|Caenorhabditis elegans Hypothetical
protein JC8.6a protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 144 VLNMDANQFREFGRAVIDMLASYAENIRDYDVLPSVE-PG 260
++NM+ REFGR + M+ + E +D D P+ + PG
Sbjct: 390 LINMEKLVLREFGRCLEQMITNTTELTQDLDAAPTDDIPG 429
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 622 SNPTKVASLADP*ITPPPG-PEEQFRNSSGKSNSLPSQFIVTTSSSVHAGLAIQLNPTTA 446
+N KV LAD + G PE++ R + + ++ +V ++ + +I L+P+T
Sbjct: 37 TNVVKVIDLADNTASYTIGDPEDELRITCTAVDKNRNRLLVAYNNQIIREYSIPLDPSTT 96
Query: 445 KPSLS 431
KP L+
Sbjct: 97 KPELA 101
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 294 RVHFQAELLTSNQVQQTAE-HHN 229
RVHF+A +L +N V+ T E +HN
Sbjct: 706 RVHFEARILPANDVKMTVEWYHN 728
>AL032652-9|CAB76748.1| 267|Caenorhabditis elegans Hypothetical
protein Y63D3A.11 protein.
Length = 267
Score = 28.7 bits (61), Expect = 5.2
Identities = 8/20 (40%), Positives = 16/20 (80%)
Frame = +3
Query: 312 KDIMKDFNQSIMPGVTHWQS 371
+D + DFN++++ G+ HW+S
Sbjct: 206 EDNLVDFNETLLKGIVHWKS 225
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform b
protein.
Length = 4203
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 294 RVHFQAELLTSNQVQQTAE-HHN 229
RVHF+A +L +N V+ T E +HN
Sbjct: 623 RVHFEARILPANDVKMTVEWYHN 645
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 294 RVHFQAELLTSNQVQQTAE-HHN 229
RVHF+A +L +N V+ T E +HN
Sbjct: 944 RVHFEARILPANDVKMTVEWYHN 966
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 294 RVHFQAELLTSNQVQQTAE-HHN 229
RVHF+A +L +N V+ T E +HN
Sbjct: 944 RVHFEARILPANDVKMTVEWYHN 966
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 294 RVHFQAELLTSNQVQQTAE-HHN 229
RVHF+A +L +N V+ T E +HN
Sbjct: 944 RVHFEARILPANDVKMTVEWYHN 966
>AF067942-13|AAG45577.2| 386|Caenorhabditis elegans Hypothetical
protein ZK6.11a protein.
Length = 386
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 396 SGSSFASIIGNMLSDGLAVVGF 461
SG+S A++IGN+ + G+ VGF
Sbjct: 278 SGASGANVIGNLTTGGMVTVGF 299
>AF067942-12|AAT68887.1| 385|Caenorhabditis elegans Hypothetical
protein ZK6.11b protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 396 SGSSFASIIGNMLSDGLAVVGF 461
SG+S A++IGN+ + G+ VGF
Sbjct: 278 SGASGANVIGNLTTGGMVTVGF 299
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Frame = -3
Query: 294 RVHFQAELLTSNQVQQTAE-HHN 229
RVHF+A +L +N V+ T E +HN
Sbjct: 623 RVHFEARILPANDVKMTVEWYHN 645
>Z68316-2|CAA92681.1| 352|Caenorhabditis elegans Hypothetical
protein K08E4.3 protein.
Length = 352
Score = 28.3 bits (60), Expect = 6.9
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 573 GGVIQGSASEATLVGLLVAKDKTVRRFMNNNPDLDE 680
GG++ G + A + G++ KTV + NP L E
Sbjct: 163 GGIVSGPVATALVTGMIGMTAKTVAELTSFNPRLSE 198
>Z54284-1|CAA91059.1| 2198|Caenorhabditis elegans Hypothetical
protein D2085.1 protein.
Length = 2198
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
Frame = +3
Query: 300 PEDWKDIMKDFNQSIMPGVTHWQSP----QFHAFYPSGSSFASIIGNMLSDGL 446
P DWK + + N G+ H P QFH + +G + + ++ +D +
Sbjct: 308 PADWKALFTNENDKTNEGIVHSSKPFFSVQFHPEHTAGPTDCEFLFDVFADSV 360
>AF067211-4|AAC16995.1| 532|Caenorhabditis elegans Hypothetical
protein B0205.9 protein.
Length = 532
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -2
Query: 523 LPSQFIVTTSSSVHAGLAIQLNPTTAKPSLS 431
LPS+ ++TT + G+ + P T+ PS S
Sbjct: 444 LPSELVITTLQTFFLGITRKFRPETSAPSKS 474
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,486,257
Number of Sequences: 27780
Number of extensions: 398354
Number of successful extensions: 1151
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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