Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M10
(815 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47500.1 68415.m05929 kinesin motor protein-related 50 2e-06
At5g27000.1 68418.m03221 kinesin motor protein-related non-conse... 48 7e-06
At1g63640.2 68414.m07198 kinesin motor protein-related C-termina... 42 5e-04
At1g63640.1 68414.m07197 kinesin motor protein-related C-termina... 42 5e-04
At5g41310.1 68418.m05020 kinesin motor protein-related 41 0.001
At3g10310.1 68416.m01237 kinesin motor protein-related similar t... 40 0.001
At1g09170.1 68414.m01024 kinesin motor protein-related similar t... 40 0.003
At5g48460.1 68418.m05992 fimbrin-like protein, putative strong s... 34 0.098
At5g35700.1 68418.m04269 fimbrin-like protein, putative similar ... 34 0.13
At3g44730.1 68416.m04814 kinesin motor protein-related similar t... 34 0.13
At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical t... 33 0.23
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 33 0.30
At2g04750.1 68415.m00485 fimbrin-like protein, putative similar ... 33 0.30
At5g62240.1 68418.m07815 expressed protein various predicted pro... 31 0.69
At2g25730.1 68415.m03084 expressed protein 31 0.69
At4g01210.1 68417.m00159 glycosyltransferase family protein 1 co... 31 1.2
At5g10050.1 68418.m01164 short-chain dehydrogenase/reductase (SD... 29 2.8
At3g11170.1 68416.m01355 omega-3 fatty acid desaturase, chloropl... 29 2.8
At5g06140.1 68418.m00683 phox (PX) domain-containing protein sim... 28 8.5
At3g59100.1 68416.m06589 glycosyl transferase family 48 protein ... 28 8.5
>At2g47500.1 68415.m05929 kinesin motor protein-related
Length = 974
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Frame = +1
Query: 178 LRDGVILCKLANKLAPGSVKKIQERGTN------------FQLMENIQRFQAAIKKYGVP 321
LR G+ILCK+ NK+ PG+V K+ E + FQ EN++ F AI++ G P
Sbjct: 79 LRSGIILCKVLNKVQPGAVSKVVESPCDAILVADGAPLSAFQYFENVRNFLVAIQEMGFP 138
Query: 322 EEEIFQTADLFERRNIPQVTLCLYAL 399
F+ +DL + N +V C+ A+
Sbjct: 139 ---TFEASDLEQGGNASRVVNCVLAI 161
>At5g27000.1 68418.m03221 kinesin motor protein-related
non-consensus AT donor splice site at exon 12;
non-consensus AC acceptor splice site at exon 13
Length = 987
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Frame = +1
Query: 178 LRDGVILCKLANKLAPGSVKKIQERGTN---------FQLMENIQRFQAAIKKYGVPEEE 330
LR G++LC + NK+ PGSV K+ E + FQ ENI+ F AI++ G+P
Sbjct: 79 LRSGIVLCNVLNKVNPGSVSKVVEAPDDVADGAALSAFQYFENIRNFLVAIEEMGLPS-- 136
Query: 331 IFQTADLFERRNIPQVTLCLYAL 399
F+ +D+ + ++ C+ AL
Sbjct: 137 -FEASDMEKGGKSIRIVNCILAL 158
>At1g63640.2 68414.m07198 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1065
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = +1
Query: 109 QXVLTWISDVLGX-PLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQERGTNFQ-L 270
Q ++ W+++ L LP A ED LRDG +LC L N+L+PGS++ G +F+
Sbjct: 43 QSLVEWLNETLPYLKLPWEASEDELRACLRDGTVLCSLLNQLSPGSMR----MGGSFEPA 98
Query: 271 MENIQRFQAAIKKYGVPEEEI 333
I+RF A+ + +P E+
Sbjct: 99 SVKIERFLTAMDEMALPRFEV 119
>At1g63640.1 68414.m07197 kinesin motor protein-related C-terminal
region is similar to C-term region of kinesin motor
protein GB:AAB51397 (Mus musculus); contains Pfam
profile: PF00225 Kinesin motor domain
Length = 1064
Score = 41.9 bits (94), Expect = 5e-04
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Frame = +1
Query: 109 QXVLTWISDVLGX-PLPNGAYED----VLRDGVILCKLANKLAPGSVKKIQERGTNFQ-L 270
Q ++ W+++ L LP A ED LRDG +LC L N+L+PGS++ G +F+
Sbjct: 43 QSLVEWLNETLPYLKLPWEASEDELRACLRDGTVLCSLLNQLSPGSMR----MGGSFEPA 98
Query: 271 MENIQRFQAAIKKYGVPEEEI 333
I+RF A+ + +P E+
Sbjct: 99 SVKIERFLTAMDEMALPRFEV 119
>At5g41310.1 68418.m05020 kinesin motor protein-related
Length = 961
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Frame = +1
Query: 109 QXVLTWISDVLGX-PLPNGAYEDVLR----DGVILCKLANKLAPGSVKKIQERGTNFQL- 270
Q ++ W+++ L LP A E+ LR DG +LC L N+L+PGS++ G +F+
Sbjct: 44 QSLVEWLNETLPYLNLPWEASEEELRACLVDGTVLCNLLNQLSPGSMR----MGGSFEPG 99
Query: 271 MENIQRFQAAIKKYGVPEEE 330
NI+RF AA+ + +P E
Sbjct: 100 CVNIERFLAAMDEMTLPRFE 119
>At3g10310.1 68416.m01237 kinesin motor protein-related similar to
carboxy-terminal kinesin 2 GB:P79955 [Xenopus laevis]
Length = 897
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Frame = +1
Query: 124 WISDVLGX-PLPNGAYE----DVLRDGVILCKLANKLAPGSVKKIQERGT---------- 258
W+ V+G +PN E LR+G+ILC NK+ PG+V K+ E +
Sbjct: 28 WLKSVVGQLGIPNQPSEKEFISCLRNGMILCNAINKIHPGAVSKVVENYSYLNGEYQLPP 87
Query: 259 NFQLMENIQRFQAAIKKYGVPEEEIFQ-TADLFERRNIPQVTLCLYAL 399
+Q EN++ F A++ +P E D E ++ +V C+ L
Sbjct: 88 AYQYFENVRNFLVALETLRLPGFEASDLEKDNLESGSVTKVVDCILGL 135
>At1g09170.1 68414.m01024 kinesin motor protein-related similar to
GB:AAB61066
Length = 1010
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Frame = +1
Query: 178 LRDGVILCKLANKLAPGSVKKIQERGTN------------FQLMENIQRFQAAIKKYGVP 321
LR G++LC + N++ PG+V K+ E + FQ EN++ F +++ G+P
Sbjct: 89 LRSGILLCNVLNRVKPGAVPKVVEAPNDPLVNQDGAALSAFQYFENLRNFLVFVEEMGIP 148
Query: 322 EEEIFQTADLFERRNIPQVTLCLYAL 399
F+ +D + ++ C+ AL
Sbjct: 149 ---TFEVSDFEKGGKSARIVECVLAL 171
>At5g48460.1 68418.m05992 fimbrin-like protein, putative strong
similarity to fimbrin-like protein AtFim2 [Arabidopsis
thaliana] GI:2737926; contains Pfam profile PF00307:
Calponin homology (CH) domain
Length = 654
Score = 34.3 bits (75), Expect = 0.098
Identities = 20/44 (45%), Positives = 25/44 (56%)
Frame = +1
Query: 148 PLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMEN 279
P N +E V +DGV+LCKL N PG+ I ER N + M N
Sbjct: 152 PSSNDLFE-VAKDGVLLCKLINVAVPGT---IDERAINTKSMLN 191
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 124 WISDVLGXPLPNGAYEDVLRDGVILCKLANKLAPGSV 234
WI+ G N +ED LRDG IL + +K++PG V
Sbjct: 403 WINSFDGSVYINNVFED-LRDGWILLQTLDKVSPGIV 438
>At5g35700.1 68418.m04269 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893, fimbrin [Schizosaccharomyces pombe]
GI:3057144; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 687
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 163 AYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 261
A+ D+++DGV+LCKL N PG+ I ER N
Sbjct: 154 AFFDLVKDGVLLCKLINVAVPGT---IDERAIN 183
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +1
Query: 124 WISDVLGXPLPNGAYEDVLRDGVILCKLANKLAPGSV 234
WI+ + N +ED LR+G +L ++ +K++PGSV
Sbjct: 401 WINSLGTATYVNNVFED-LRNGWVLLEVLDKVSPGSV 436
>At3g44730.1 68416.m04814 kinesin motor protein-related similar to 4
other kinesin-like proteins of A. thaliana: F02P16.12
(PID:g2191180), katA (D11371), katB (D21137), and katC
(D21138); contains non-consensus AT-AC splice sites at
intron 10
Length = 1087
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 178 LRDGVILCKLANKLAPGSVKKIQE 249
LR+G+ILC + NK+ PGSV K+ E
Sbjct: 22 LRNGLILCNVLNKVNPGSVLKVVE 45
>At4g26700.1 68417.m03848 fimbrin-like protein (FIM1) identical to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893
Length = 687
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 148 PLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMEN 279
P N YE +++DGV+LCKL N PG+ I ER N + + N
Sbjct: 151 PHSNQLYE-LVKDGVLLCKLINVAVPGT---IDERAINTKRVLN 190
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 148 PLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTNFQLMEN 279
P N YE +++DGV+LCKL N PG+ I ER N + + N
Sbjct: 152 PDSNDLYE-LVKDGVLLCKLINIAVPGT---IDERAINTKRVLN 191
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 124 WISDVLGXPLPNGAYEDVLRDGVILCKLANKLAPGSV 234
WI+ + N +EDV R+G IL ++ +K+ PGSV
Sbjct: 402 WINSLGIESYVNNVFEDV-RNGWILLEVVDKVYPGSV 437
>At2g04750.1 68415.m00485 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 652
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +1
Query: 148 PLPNGAYEDVLRDGVILCKLANKLAPGSVKKIQERGTN 261
P N + D+++DGV+LCKL N PG+ I ER N
Sbjct: 144 PTTNALF-DLVKDGVLLCKLINIAVPGT---IDERAIN 177
>At5g62240.1 68418.m07815 expressed protein various predicted
proteins, Arabidopsis thaliana; expression supported by
MPSS
Length = 366
Score = 31.5 bits (68), Expect = 0.69
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = +1
Query: 196 LCKLANKLAPGSVKKIQERGTNFQLMENIQRFQAAIKKYGVPEEEIFQTADLFER 360
L K +AP V K+Q + TN Q E ++ K VP+E +TA+ ER
Sbjct: 161 LAKFGENVAPVLVSKLQNQDTNRQKQEAKVAHVSSRAKLTVPKEPNLRTAERSER 215
>At2g25730.1 68415.m03084 expressed protein
Length = 2464
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1
Query: 521 RFSSALWARSCSSVKVRSFLSAI 453
RF + LW+RSC S + SFLS I
Sbjct: 52 RFDNVLWSRSCPSPSLLSFLSTI 74
>At4g01210.1 68417.m00159 glycosyltransferase family protein 1
contains Pfam profile: PF00534 Glycosyl transferases
group 1
Length = 981
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 629 INVENIGKNLEAVYMWRVLPKPP*PDWEAPLLKPIWRFSSALWARSC 489
+N K+ +A+Y W + K P PL KP W F A+ A +C
Sbjct: 761 LNAIQTRKHGDALYFWVRMDKDP----RNPLQKPFWSFCDAINAGNC 803
>At5g10050.1 68418.m01164 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 279
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 616 FSTLISVFVHGRIWLNDFFTFKIIL 690
+STL++V H +WL DFF ++++
Sbjct: 253 YSTLMAVMYHMPLWLKDFFQKQVLM 277
>At3g11170.1 68416.m01355 omega-3 fatty acid desaturase, chloroplast
(FAD7) (FADD) identical to omega-3 fatty acid
desaturase, chloroplast precursor SP:P46310 [Arabidopsis
thaliana (Mouse-ear cress)]; identical to Pfam profile
PF00487: Fatty acid desaturase; identical to cDNA
plastid fatty acid desaturase GI:809491
Length = 446
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -1
Query: 236 FTDPGANLLANLQRITPSLSTSSY 165
+T P +N L+N + PSLS+SSY
Sbjct: 18 YTTPRSNFLSNNNKFRPSLSSSSY 41
>At5g06140.1 68418.m00683 phox (PX) domain-containing protein
similar to SP|O60749 Sorting nexin 2 {Homo sapiens};
contains Pfam profile PF00787: PX domain
Length = 402
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -1
Query: 614 IGKNLEAVYMWRVLPKPP*PDWEAPLLKPIWRFSSALWAR 495
+G ++A +RV+ K P+++ P I R+S +W R
Sbjct: 36 LGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDFVWLR 75
>At3g59100.1 68416.m06589 glycosyl transferase family 48 protein
contains Pfam profile: PF02364 1,3-beta-glucan synthase
Length = 1934
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -1
Query: 230 DPGANLLANLQRITPSLSTSSYAPFGSGXPKTSEIQVRT 114
D A+ N ITP + +G PKT+ ++VRT
Sbjct: 444 DLKADFFLNSDEITPQDERLNQVTYGKSKPKTNFVEVRT 482
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,171,361
Number of Sequences: 28952
Number of extensions: 408250
Number of successful extensions: 925
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 922
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1863090400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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