Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M07
(756 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 6e-38
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 116 2e-26
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 116 3e-26
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 105 5e-23
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 6e-18
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 1e-17
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 75 6e-14
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 71 1e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 61 8e-10
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 60 1e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 60 3e-09
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 60 3e-09
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 59 3e-09
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 58 6e-09
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 58 6e-09
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 55 5e-08
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 7e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 54 1e-07
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 53 2e-07
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 4e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 49 4e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 46 3e-05
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 35 0.082
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 34 0.14
SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19) 33 0.25
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.8
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 29 4.1
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 4.1
SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07) 28 9.4
SB_27105| Best HMM Match : GDC-P (HMM E-Value=0) 28 9.4
SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3) 28 9.4
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 154 bits (374), Expect = 6e-38
Identities = 69/161 (42%), Positives = 100/161 (62%)
Frame = +3
Query: 267 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPD 446
P+ + +PFNKNFY+ HP + K+S E+++ R K + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 447 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIR 626
+ ++ + Y +PT IQ Q PIA+SG++++G+A+TGSGKT A++ PA+VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 627 RGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
GDGPI L+ APT EL QQI A FG + VFGG
Sbjct: 587 VGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGG 627
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 116 bits (279), Expect = 2e-26
Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 4/134 (2%)
Frame = +3
Query: 363 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 542
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 543 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTXELAQQIQQVAAXFG 710
GVA+TGSGKT A+ +P +V I P I R + GP AL+LAPT ELAQQI++ FG
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFG 202
Query: 711 HTSYVRNTCVFGGA 752
+R V GGA
Sbjct: 203 RPLGIRTVSVIGGA 216
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 116 bits (278), Expect = 3e-26
Identities = 63/139 (45%), Positives = 82/139 (58%)
Frame = +3
Query: 339 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 518
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 519 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVA 698
+ILP IVHIN+QP ++ GDGPI LVL PT ELAQQ+Q+VA
Sbjct: 113 --------------------FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVA 152
Query: 699 AXFGHTSYVRNTCVFGGAP 755
G +R+TC++GGAP
Sbjct: 153 YSVGKHCKLRSTCIYGGAP 171
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 105 bits (251), Expect = 5e-23
Identities = 50/130 (38%), Positives = 77/130 (59%)
Frame = +3
Query: 297 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 476
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 477 YKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVL 656
++ PTPIQ Q MSG++++G+A+TGSGKTLAY LP + + + P GD P+AL+L
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALIL 151
Query: 657 APTXELAQQI 686
PT EL QQ+
Sbjct: 152 TPTRELMQQV 161
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 88.2 bits (209), Expect = 6e-18
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 4/135 (2%)
Frame = +3
Query: 357 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 536
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 537 LVGVAQTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTXELAQQIQQVAAX 704
++ AQTGSGKT A++LP + + N P A+ +APT ELA QI A
Sbjct: 751 VMACAQTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARK 810
Query: 705 FGHTSYVRNTCVFGG 749
F H + +R +GG
Sbjct: 811 FAHGTMLRPVVCYGG 825
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 87.0 bits (206), Expect = 1e-17
Identities = 46/121 (38%), Positives = 65/121 (53%)
Frame = +3
Query: 387 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 566
VSG I F E F + + + GY+ PTP+Q PI M+G++L+ AQTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 567 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFG 746
KT AY+LP + + Q P+AL +APT ELA+QI A F + ++ +G
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 747 G 749
G
Sbjct: 589 G 589
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 74.9 bits (176), Expect = 6e-14
Identities = 41/112 (36%), Positives = 63/112 (56%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 593
++ F + G+ G+ PT IQ QG P+A+SG++++G A+TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 594 IVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
I + Q DG ALV++PT ELA Q +V G+ + + GG
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGG 159
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/88 (36%), Positives = 52/88 (59%)
Frame = +3
Query: 312 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 491
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 492 PIQAQGWPIAMSGKNLVGVAQTGSGKTL 575
PIQ Q P+ +SG++++ A TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 65.7 bits (153), Expect = 4e-11
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +3
Query: 252 QNMRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFE 428
+ ++ D +V QPF K+FY P + K +P E +E+R E + V G P++ +
Sbjct: 49 EELQPVDHKTVVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWA 108
Query: 429 EANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 557
+ + +K Y++PTPIQAQ P+ MSG++++ + T
Sbjct: 109 QTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAIVMT 151
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +3
Query: 567 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFG 746
K +Y P + P I G IA+V+ PT ELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 747 G 749
G
Sbjct: 181 G 181
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 61.3 bits (142), Expect = 8e-10
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Frame = +3
Query: 372 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK--N 536
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ N
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVN 144
Query: 537 LVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG-H 713
++ +Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H
Sbjct: 145 MIAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKH 199
Query: 714 TSYVR 728
+++
Sbjct: 200 CPHIK 204
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/93 (37%), Positives = 49/93 (52%)
Frame = +3
Query: 471 MGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 650
MG K+PT IQ P + G++ +G A+TGSGKT A+ LP + + + P G A+
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDP-----YGIFAV 79
Query: 651 VLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
VL PT ELA QI G ++ + GG
Sbjct: 80 VLTPTRELAFQIADQFKVLGRPIGLKEAVIVGG 112
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = +3
Query: 456 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 635
QG+K MG+ T IQ + + G++L+G A+TGSGKTLA+++P +V + + + +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRN 643
Query: 636 GPIALVLAPTXELAQQIQQVA 698
G ++++PT EL+ Q VA
Sbjct: 644 GTGVIIISPTRELSLQTYGVA 664
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG 710
+ + ALVL PT ELA Q Q+ G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 59.7 bits (138), Expect = 3e-09
Identities = 31/96 (32%), Positives = 53/96 (55%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
FE+ + G+ G+ +P+PIQ + P+A++G++++ A+ G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG 710
+ + ALVL PT ELA Q Q+ G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +3
Query: 492 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-NNQPPIRRGDGPIALVLAPTX 668
PIQA + G++++G A+TG+GKTL++ LP + + + + +RG P LV+APT
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTR 157
Query: 669 ELAQQIQQVAAXFGHTSYVRNTCVFGGAP 755
ELA+Q+ S + C++GG P
Sbjct: 158 ELAKQVGNEFENL--KSNLEVYCIYGGMP 184
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +3
Query: 456 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 635
+ V +G+ PTPIQA P+A+ GK++ A TG+GKT A++LP + + +P +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSP 80
Query: 636 GPIALVLAPTXELAQQ 683
LV+ PT ELA Q
Sbjct: 81 AIRVLVITPTRELAIQ 96
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 58.4 bits (135), Expect = 6e-09
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +3
Query: 357 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 536
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 537 LVGVAQTGSGKT 572
++ AQTGSGKT
Sbjct: 174 VMACAQTGSGKT 185
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 593
I FE+ + + + V GYK+PTP+Q PI ++L+ AQTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 594 IVHINNQPP 620
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 56.8 bits (131), Expect = 2e-08
Identities = 33/95 (34%), Positives = 54/95 (56%)
Frame = +3
Query: 465 KTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 644
+T G+++P+ IQ + + G++++ AQ+G+GKT + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 645 ALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
ALVL+PT ELA QIQ+V G V+ GG
Sbjct: 68 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGG 102
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 55.6 bits (128), Expect = 4e-08
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 15/118 (12%)
Frame = +3
Query: 441 PDYVQQGVKTMGYKEPTPIQAQGWPIAMS-GKNLVGVAQTGSGKTLAYILPAIVHIN--- 608
PD + + + G+ +PTPIQ+ P A+ ++++G A+TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYK 197
Query: 609 ----NQPPI-------RRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
Q P +G +AL++APT ELA Q++ + V+ + GG
Sbjct: 198 KRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGG 255
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 55.2 bits (127), Expect = 5e-08
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Frame = +3
Query: 378 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQT 557
EV + G P + F +Y + +G PT +Q WP + G+++ GVA
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 558 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTXELAQQIQQVAA-XFGHTSYV 725
GSGK LAY+LP I I + +GP+ L+L + ++ V +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 726 RNTCVFGG 749
R +FGG
Sbjct: 294 RVQMIFGG 301
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Frame = +3
Query: 513 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQ 692
P+ M GK++V +A+TGSGKT A+++P + G AL+L+PT ELA Q Q+
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTH---TAKVGIRALILSPTRELALQTQK 369
Query: 693 VAAXFGHTSYVRNTCVFGG 749
G + ++++ + GG
Sbjct: 370 FIKELGRFTGLKSSVILGG 388
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 54.0 bits (124), Expect = 1e-07
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Frame = +3
Query: 444 DYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPI 623
D V + + + +PT IQ P + +++ AQTGSGKTLAY+ P +VH +
Sbjct: 387 DDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEE 445
Query: 624 RRG-----DGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
R G P A ++ P ELA QI + A H + R+ + GG
Sbjct: 446 RHGILARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGG 492
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 53.2 bits (122), Expect = 2e-07
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +3
Query: 441 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPP 620
P V++ +K MG +P PIQ + P S K+L+ ++TG+GK+L ++LP++ Q P
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP 222
Query: 621 IRRGDGPIALVLAPTXELA-QQIQQVAAXFGHTSYV 725
RG G I ++ PT ELA Q + +V+ G S V
Sbjct: 223 -GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 522 MSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTXELAQQIQQVA 698
+S ++++ AQ+G+GKT + + + I+ + G D ALVLAPT ELAQQIQ+V
Sbjct: 120 LSARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVV 179
Query: 699 AXFGHTSYVRNTCVFGG 749
G +V+ GG
Sbjct: 180 LALGDYMHVKCHACIGG 196
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 351 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 518
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 519 AMSGKNLVG 545
G G
Sbjct: 197 MAHGPKKSG 205
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/85 (28%), Positives = 48/85 (56%)
Frame = +3
Query: 456 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 635
+G+ G+++P+PIQ + P+ G +L+ A++G+GKT + + A+ ++ I +
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV-----ITESN 80
Query: 636 GPIALVLAPTXELAQQIQQVAAXFG 710
++L PT E+A Q++ V G
Sbjct: 81 CIQIIILTPTREIAVQVKDVICAIG 105
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +3
Query: 531 KNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG 710
K+++G+A+TGSGKT A+ LP + + + P AL+L PT ELA QI + G
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALG 56
Query: 711 HTSYVRNTCVFGG 749
V+ + GG
Sbjct: 57 SGIGVKCAVIVGG 69
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 34.7 bits (76), Expect = 0.082
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +3
Query: 303 KNFYDPHPTVLKRSPYEVEEY-RNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 479
K D + LK E +E+ +N TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 480 KEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 617
Q Q +SG + + V TG+GK+L Y LPA ++ P
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 33.9 bits (74), Expect = 0.14
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 639 PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
P ALVL+PT ELA QIQ+V G V+ GG
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGG 40
>SB_51441| Best HMM Match : DEAD (HMM E-Value=4.9e-19)
Length = 304
Score = 33.1 bits (72), Expect = 0.25
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +3
Query: 474 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 653
GY + P+Q Q ++ K+ + + TG+GKT+ Y +PA++ +N + +V
Sbjct: 136 GYIDFRPMQRQAIDTLLAEKDSLILLPTGAGKTICYAIPALL-LNG----------VTIV 184
Query: 654 LAPTXE-LAQQIQQVAAXFGHTSYVRNT 734
+ P L+ Q+Q++ + + ++R+T
Sbjct: 185 ITPLLALLSDQVQRLRSLGINACFIRST 212
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 399 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 512
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 345 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 476
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Frame = -1
Query: 489 SVLCNPLSLHLVAHNQENLLLQSIE*DYEPQRHLQLPRVYFYTLRLHMVIF*E-----L* 325
++ C L ++ +N LLL + Y Q L +VY T H ++ L
Sbjct: 397 AIACCLLQVYHNTYNSHRLLLIAGVSQYLQQPSLAAMQVYHNTYNSHRLLLIAGVSQYLQ 456
Query: 324 DVDHKSFC*KVGVKQNPNLGVACSALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQ 145
++C + + L A + + H L YC RC T CCLLQ
Sbjct: 457 QPSLAAYCRCITI-----LTTAIACCYASVSQHLQQPSLAAYC-RCITILTTAIACCLLQ 510
Query: 144 IWNHRFHGY 118
++++ ++G+
Sbjct: 511 VYHNTYNGH 519
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 522 MSGKNLVGVAQTGSGKTLAYILPAIV 599
MSG + + + TG GK+L + LPA+V
Sbjct: 102 MSGVDCILIMPTGGGKSLCFQLPAVV 127
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 357 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 449
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_8125| Best HMM Match : MFS_1 (HMM E-Value=3.2e-07)
Length = 401
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 252 ALQRILFSHQSLQILQIYCHRCQTETNYRRICCLLQIWN-HRFHGYYSS 109
AL+RI + ++ C +YRR CC L +W H + Y+SS
Sbjct: 197 ALERIATPVTTSKLRCSTTQECCVRVDYRRKCC-LHVWRVHTTNTYWSS 244
>SB_27105| Best HMM Match : GDC-P (HMM E-Value=0)
Length = 767
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 622 IGGWLFMCTIAGKM*ANVLPEPVWATP-TKFFPDIAIGQ 509
IG + C + + N+L P W TP T + P++A G+
Sbjct: 49 IGMGYYSCHVPTTILRNILENPGWTTPYTPYQPELAQGR 87
>SB_19261| Best HMM Match : Keratin_B2 (HMM E-Value=3)
Length = 333
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = +3
Query: 474 GYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 638
G+ P+ Q S V A T T AY+ P +V PP+R G G
Sbjct: 231 GFSPTGPVNGQPTNSTSSSPFSVTSADTIINPTAAYVRPGMVPREIIPPLRDGSG 285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,448,945
Number of Sequences: 59808
Number of extensions: 481290
Number of successful extensions: 1215
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2058295707
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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