Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M07
(756 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 157 8e-39
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 136 2e-32
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 126 1e-29
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 124 5e-29
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 100 1e-21
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 95 5e-20
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 95 5e-20
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 95 5e-20
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 88 7e-18
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 83 2e-16
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 77 2e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 77 2e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 77 2e-14
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 76 2e-14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 76 2e-14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 71 7e-13
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 71 7e-13
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 71 7e-13
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 71 9e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 67 1e-11
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 65 6e-11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 65 6e-11
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 62 4e-10
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 62 4e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 59 3e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 58 9e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 57 1e-08
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 57 1e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 57 1e-08
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 56 4e-08
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 56 4e-08
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 55 6e-08
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 52 3e-07
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 52 4e-07
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 47 1e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 40 0.003
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 37 0.013
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 35 0.072
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.13
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.29
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 32 0.38
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.38
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 32 0.51
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 32 0.51
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.67
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 31 1.2
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 31 1.2
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.7
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.6
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.6
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.6
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 157 bits (381), Expect = 8e-39
Identities = 72/165 (43%), Positives = 112/165 (67%)
Frame = +3
Query: 258 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 437
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 438 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP 617
P + + + +++PT IQ+ WPIAMSG++++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 618 PIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGGA 752
+RG+GP LVL PT ELAQQ+Q+V+ F H+ ++ TC+FGGA
Sbjct: 196 HRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGA 240
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 136 bits (329), Expect = 2e-32
Identities = 61/160 (38%), Positives = 97/160 (60%)
Frame = +3
Query: 270 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 449
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 450 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRR 629
+ + ++ Y++PTPIQA P A+SG++++G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 630 GDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
G+GP+A+++ PT ELA Q+ Q A F + C +GG
Sbjct: 336 GEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGG 375
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 126 bits (305), Expect = 1e-29
Identities = 63/165 (38%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Frame = +3
Query: 258 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 434
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 435 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQ 614
+ +K Y +PT IQAQ P MSG++++G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 615 PPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
P + GDGPIA++LAPT ELA Q + A F ++ C +GG
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGG 414
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 124 bits (300), Expect = 5e-29
Identities = 59/134 (44%), Positives = 86/134 (64%), Gaps = 4/134 (2%)
Frame = +3
Query: 363 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 542
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 543 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTXELAQQIQQVAAXFG 710
GVA+TGSGKT A++LP +V I + P + R + GP A+++APT ELAQQI++ FG
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFG 402
Query: 711 HTSYVRNTCVFGGA 752
++ V GGA
Sbjct: 403 KLLGIKTVSVIGGA 416
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 100 bits (240), Expect = 1e-21
Identities = 51/127 (40%), Positives = 83/127 (65%), Gaps = 7/127 (5%)
Frame = +3
Query: 390 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSG 566
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ +GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 567 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTXELAQQIQQVAAXFGHTSYVR 728
KTLA++LPA++HI+ Q + D P LVL+PT ELAQQI+ + + Y +
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-K 192
Query: 729 NTCVFGG 749
+ C++GG
Sbjct: 193 SVCLYGG 199
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +3
Query: 357 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 536
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 537 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTXELAQQI 686
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT ELA QI
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 238
Query: 687 QQVAAXFGHTSYVRNTCVFGG 749
+ A F + S ++ ++GG
Sbjct: 239 HKEATKFSYKSNIQTAILYGG 259
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +3
Query: 357 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 536
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 537 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTXELAQQI 686
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT ELA QI
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 222
Query: 687 QQVAAXFGHTSYVRNTCVFGG 749
+ A F + S ++ ++GG
Sbjct: 223 HKEATKFSYKSNIQTAILYGG 243
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 95.1 bits (226), Expect = 5e-20
Identities = 57/141 (40%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +3
Query: 357 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 536
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 537 LVGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPTXELAQQI 686
L+ AQTGSGKT A++LP I HI +PP RR P ALVL+PT ELA QI
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQI 219
Query: 687 QQVAAXFGHTSYVRNTCVFGG 749
+ A F + S ++ ++GG
Sbjct: 220 HKEATKFSYKSNIQTAILYGG 240
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 87.8 bits (208), Expect = 7e-18
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Frame = +3
Query: 318 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 494
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 495 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 665
IQ QG P+A+SG++++G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
Query: 666 XELAQQI 686
ELA+QI
Sbjct: 276 RELARQI 282
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 83.0 bits (196), Expect = 2e-16
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Frame = +3
Query: 381 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTG 560
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L+ AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 561 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTXELAQQIQQVAAXF 707
SGKT A+++P + I P R+ P ALVL+PT EL+ QI + F
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKF 273
Query: 708 GHTSYVRNTCVFGG 749
+ + + + ++GG
Sbjct: 274 AYRTPITSALLYGG 287
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = +3
Query: 411 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 590
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 591 AIVHINNQPPIR-RGDG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + + + G+G P ++L PT ELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = +3
Query: 411 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 590
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 591 AIVHINNQPPIR-RGDG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + + + G+G P ++L PT ELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = +3
Query: 411 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 590
P + F EAN + +Q+ V GY + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 591 AIVHINNQPPIR-RGDG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + + + G+G P ++L PT ELA QI F + + + V+GG
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGG 455
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +3
Query: 411 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 590
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 591 AIVHINNQPPIRRG-DG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + + + G +G P ++L PT ELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 76.2 bits (179), Expect = 2e-14
Identities = 40/117 (34%), Positives = 64/117 (54%), Gaps = 4/117 (3%)
Frame = +3
Query: 411 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 590
P + F +++ P +++ V+ GY TPIQ P+ GK+++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 591 AIVHINNQPPIRRG-DG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + + + G +G P ++L PT ELA QI F + S + V+GG
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGG 412
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 71.3 bits (167), Expect = 7e-13
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 603 INNQPPIR-RGDG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ ++ + G+G P ++L PT EL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 71.3 bits (167), Expect = 7e-13
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 603 INNQPPIR-RGDG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ ++ + G+G P ++L PT EL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 71.3 bits (167), Expect = 7e-13
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F EAN + +++ V GY + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 603 INNQPPIR-RGDG---PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ ++ + G+G P ++L PT EL QI F + + + V+GG
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGG 666
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/115 (32%), Positives = 63/115 (54%)
Frame = +3
Query: 405 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 584
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 585 LPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+P + + R G AL+++PT ELA Q +V G + +R C+ GG
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 70.9 bits (166), Expect = 9e-13
Identities = 37/115 (32%), Positives = 63/115 (54%)
Frame = +3
Query: 405 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYI 584
H +++ V + ++ G+ +PTPIQ + P M GK++V +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 585 LPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+P + + R G AL+++PT ELA Q +V G + +R C+ GG
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGG 130
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/91 (38%), Positives = 52/91 (57%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQV 695
+ +P + LVL PT ELA Q+ QV
Sbjct: 210 MIYRP--KGASCTRVLVLVPTRELAIQVFQV 238
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
++ P G AL+L PT ELA QI + G ++ + + GG
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 64.9 bits (151), Expect = 6e-11
Identities = 36/109 (33%), Positives = 59/109 (54%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F + ++ Q ++TM K TP+QA P + G +++G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
++ P G AL+L PT ELA QI + G ++ + + GG
Sbjct: 151 LSVDP-----YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGG 194
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 62.5 bits (145), Expect = 3e-10
Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
Frame = +3
Query: 441 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI---- 605
P+ V + ++ MG+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 606 --NNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + GP AL++APT EL QI + T+ + T + GG
Sbjct: 223 DDSQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 272
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/112 (30%), Positives = 63/112 (56%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 593
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 594 IVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ I+++ P + ALV+APT ELAQQIQ+V + G V GG
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGG 134
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 62.1 bits (144), Expect = 4e-10
Identities = 34/112 (30%), Positives = 63/112 (56%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 593
++ F++ + + +G+ G+++P+ IQ + +GK+++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 594 IVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ I+++ P + ALV+APT ELAQQIQ+V + G V GG
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGG 134
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/114 (28%), Positives = 61/114 (53%)
Frame = +3
Query: 408 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYIL 587
N I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 588 PAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ ++ Q +R AL+L+PT ELA QIQ+V G V+ GG
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 57.6 bits (133), Expect = 9e-09
Identities = 35/109 (32%), Positives = 54/109 (49%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F E + + +G+ +P+ IQ P A+ GK+++G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ + P LVL PT ELA QI Q G + + GG
Sbjct: 106 LLDHP-----QAFFCLVLTPTRELAFQIGQQFEALGSGIGLIAAVIVGG 149
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 57.6 bits (133), Expect = 9e-09
Identities = 32/112 (28%), Positives = 60/112 (53%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 593
I F++ + + +G+ G+++P+ IQ + P + ++++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 594 IVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ ++ Q +R AL+L+PT ELA QIQ+V G V+ GG
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGDYMNVQCHACIGG 131
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Frame = +3
Query: 360 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 539
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 540 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTXELAQQIQQVAAX 704
V A TGSGKTLA+++P ++ + ++ P L++APT EL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 705 FGHTSYVRNTCVFGG 749
+ + ++ FGG
Sbjct: 837 LTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 57.2 bits (132), Expect = 1e-08
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Frame = +3
Query: 360 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 539
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 540 VGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTXELAQQIQQVAAX 704
V A TGSGKTLA+++P ++ + ++ P L++APT EL Q A
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQTFTTARQ 836
Query: 705 FGHTSYVRNTCVFGG 749
+ + ++ FGG
Sbjct: 837 LTYETGLKCGLAFGG 851
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/92 (29%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
F + + + + + +G+++ +Q +A+ KN++G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 603 INNQPPIRRGD-GPIALVLAPTXELAQQIQQV 695
+ + G GP A+++APT EL QI ++
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIYKL 182
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 56.0 bits (129), Expect = 3e-08
Identities = 32/86 (37%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +3
Query: 450 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI-----NNQ 614
+ + +K + Y IQ P + G +++G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 615 PPIRRGDGPIALVLAPTXELAQQIQQ 692
R+ DGP+AL+LAPT ELA QI +
Sbjct: 452 NKARQDDGPLALILAPTRELAAQIHE 477
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 55.6 bits (128), Expect = 4e-08
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Frame = +3
Query: 330 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 509
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 510 WPIAMSGKNLVGVAQTGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTXEL 674
P +N++ A TGSGKTLA+ LP I+ + + + +A+VL PT EL
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTREL 216
Query: 675 AQQ 683
A Q
Sbjct: 217 AAQ 219
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/99 (32%), Positives = 58/99 (58%)
Frame = +3
Query: 456 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 635
+ V+ +G+ T IQA+ + GK+++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 636 GPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGGA 752
G ++++PT EL+ Q V + S + V GG+
Sbjct: 140 GTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGS 178
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/97 (31%), Positives = 53/97 (54%)
Frame = +3
Query: 459 GVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 638
G+ G+++P+PIQ +A++G++++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 639 PIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
A+V+ PT ELA Q Q+ ++ GG
Sbjct: 114 --AMVIVPTRELALQTSQICVELSKHIQLKVMVTTGG 148
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 52.8 bits (121), Expect = 3e-07
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Frame = +3
Query: 477 YKEPTPIQAQGWPIAMSGK-NLVGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 635
+ EPT IQ+ P A+ + +++G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 636 GPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
GP AL++APT EL QI + T+ + T + GG
Sbjct: 68 GPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGG 105
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +3
Query: 456 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 635
+G+K Y +PT IQ +++G ++VG A+TGSGKTLA ++P ++ +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDY 147
Query: 636 GPIALVLAPTXELAQQ 683
G AL+++PT ELA Q
Sbjct: 148 GLGALIISPTRELALQ 163
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 587
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 588 PAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG 710
+ I+ P + LAPT ELA+QI +V G
Sbjct: 268 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 303
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 587
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 588 PAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG 710
+ I+ P + LAPT ELA+QI +V G
Sbjct: 293 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 328
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLVGVAQTGSGKTLAYIL 587
I F E V + + TM ++ PT IQ P+ + NL+ AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 588 PAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFG 710
+ I+ P + LAPT ELA+QI +V G
Sbjct: 677 TMLCRIDVNLMC-----PQCICLAPTLELAKQIGEVVEKMG 712
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/110 (23%), Positives = 57/110 (51%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGGA 752
+++ R +++ PT E++ QI++ T R + GG+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGS 127
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/110 (23%), Positives = 57/110 (51%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVH 602
FE + +K + P+P+QA+ P+ + G++++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 603 INNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGGA 752
+++ R +++ PT E++ QI++ T R + GG+
Sbjct: 84 LDS-----RSSHIQKVIVTPTREISVQIKETVRKVAPTG-ARTSVYVGGS 127
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/112 (31%), Positives = 53/112 (47%)
Frame = +3
Query: 414 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPA 593
++ F E P+ ++ V YK T +Q ++ ++V + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 594 IVHINNQPPIRRGDGPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCVFGG 749
+ I N G AL+L+P+ EL QI V F + V GG
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPSRELCSQIVSVIQPFAEKLNLTVETVTGG 117
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +3
Query: 423 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILP 590
FEE + + ++ + PT +Q++ P + G + + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/95 (24%), Positives = 46/95 (48%)
Frame = +3
Query: 456 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 635
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+ + +
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQ-- 66
Query: 636 GPIALVLAPTXELAQQIQQVAAXFGHTSYVRNTCV 740
++LAP +AQ+ + G V TC+
Sbjct: 67 ---VILLAPQRGMAQRAHEQLKSLGRNLNVNATCL 98
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 34.7 bits (76), Expect = 0.072
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +3
Query: 519 AMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQ 683
A+ GKN V VA TGSGKT I A+ HI + +G ++L P L Q
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER--TSQGKPSRVVLLVPKIPLVGQ 434
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.13
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = +3
Query: 513 PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQ 692
P + +++ A TGSGKT+ Y+LP + + ++P A++L P L QI
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVD 206
Query: 693 VAAXFGHTSYVRNTCVFGGA 752
+ S V GA
Sbjct: 207 EFKRWNDESGVAKVVSLSGA 226
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +3
Query: 531 KNLVGVAQTGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTXELAQQI 686
+ L+ A TG GKT A+++PAI + + +P I P L+LA T L +Q+
Sbjct: 130 RGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQL 185
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 32.3 bits (70), Expect = 0.38
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +3
Query: 495 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHI--NNQPPIRRG--DGPIALVLAP 662
+Q + G+ LV A TG GKT A+++PAI N Q P L++A
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMAS 78
Query: 663 TXELAQQI 686
T L Q+
Sbjct: 79 TSALVDQL 86
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +3
Query: 474 GYKEPTPIQAQGW-PIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 650
G+K PIQ Q + + S +N++ A GSGKT L + H N P + A+
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTPEAK------AV 1371
Query: 651 VLAPTXELAQQI 686
+ P ++A ++
Sbjct: 1372 YITPMEDMATKV 1383
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +3
Query: 516 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQV 695
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 696 AAXFGHTSYVRNTCVFGGA 752
A+ + +V +T + G+
Sbjct: 359 ASISSYLDHVYHTQIIQGS 377
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 31.9 bits (69), Expect = 0.51
Identities = 23/79 (29%), Positives = 38/79 (48%)
Frame = +3
Query: 516 IAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTXELAQQIQQV 695
+A+ GKN + A TGSGKT+ I I+ + + G AL + P + QQ
Sbjct: 303 VALQGKNTIVTAPTGSGKTV--IAANIIKEHFESRSSEGKRFKALFMTPNSMILN--QQA 358
Query: 696 AAXFGHTSYVRNTCVFGGA 752
A+ + +V +T + G+
Sbjct: 359 ASISSYLDHVYHTQIIQGS 377
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 495 IQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAI 596
+Q + G+ LV A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 492 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 599
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +3
Query: 492 PIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIV 599
P+Q MS ++ V + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 124 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 240
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 555 TGSGKTLAYILPAIVH 602
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 536 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 357
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 356 D 354
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -2
Query: 536 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 357
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 356 D 354
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 179 RRIIAEFVASSKFGTTVSTAIIPV 108
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 179 RRIIAEFVASSKFGTTVSTAIIPV 108
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 318 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 476
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 318 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 476
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,532
Number of Sequences: 27780
Number of extensions: 353587
Number of successful extensions: 1066
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -