Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M06
(843 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 2e-37
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 102 3e-22
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 35 0.072
SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05) 30 2.7
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 29 6.2
SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12) 28 8.2
SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1) 28 8.2
SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21) 28 8.2
SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
SB_27146| Best HMM Match : LIM (HMM E-Value=9.7) 28 8.2
SB_21674| Best HMM Match : LIM (HMM E-Value=0.44) 28 8.2
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 153 bits (371), Expect = 2e-37
Identities = 83/232 (35%), Positives = 123/232 (53%), Gaps = 1/232 (0%)
Frame = +1
Query: 133 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 312
+V+IA AVRTP+ V A+ RA I ++ EV +G V +A G
Sbjct: 9 DVIIACAVRTPVGSHNGDLSSLKAHELGSIVVKEALCRASISPCDVSEVILGQVLTAGQG 68
Query: 313 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 492
Q PARQA I AG+P VN +C SG+K++ L Q + G +I++AGG ESMS P
Sbjct: 69 QGPARQAAIHAGIPACVPAYGVNMLCGSGLKAVALGYQAVAMGDSNIVVAGGQESMSQAP 128
Query: 493 FYL-KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSY 669
R +G M L+D ++ DGL D +N +HMG AEN AK+ +++R++QD +A+ S
Sbjct: 129 HCCHMRPALKFGDMTLIDTMLKDGLMDSFNNYHMGITAENVAKQWEVSREEQDNFALTSQ 188
Query: 670 KRSAAAYEAKAFVDELVPVPVPQKRGAPVIFAEXEXYKRVNFEKFTKLSTVF 825
+R+ A +A F DE+V V + + G + ++ E KL F
Sbjct: 189 QRTETAQKAGYFSDEIVTVSIKTRAGLTEVNSDQFPRHGCTIEGLRKLKPCF 240
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 102 bits (245), Expect = 3e-22
Identities = 45/82 (54%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
Frame = +1
Query: 592 GNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAE 768
G CAEN A K ITR++QD+YA++SY+R+AAA++A F E+VPV +PQK+G P ++F E
Sbjct: 59 GVCAENAASKYNITREEQDDYAIHSYRRTAAAWDAGKFKQEVVPVNIPQKKGKPDIVFEE 118
Query: 769 XEXYKRVNFEKFTKLSTVFQRK 834
E YK+V+FEKF L TVF+++
Sbjct: 119 DEEYKKVSFEKFPSLKTVFKKE 140
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 11/60 (18%)
Frame = +1
Query: 307 LGQAPARQAVIFAG-----------LPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDI 453
+GQAPARQA + AG LP ST CTT+NKVCASGMKSIM AAQ L G+Q +
Sbjct: 1 MGQAPARQAALGAGTRXVTSIRDQALPISTPCTTINKVCASGMKSIMAAAQSLMCGSQGV 60
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 72.9 bits (171), Expect = 3e-13
Identities = 40/102 (39%), Positives = 59/102 (57%)
Frame = +1
Query: 526 GMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAF 705
G Q+ D + + GLTD+ MG AEN A+K ITR++ D++A+ S +R AAA+E+ AF
Sbjct: 799 GAQMEDTL-WQGLTDMLPGLPMGITAENLAEKYNITREECDQFALLSQQRWAAAHESGAF 857
Query: 706 VDELVPVPVPQKRGAPVIFAEXEXYKRVNFEKFTKLSTVFQR 831
E+VPVPV K+G + E+ KL VF++
Sbjct: 858 TAEIVPVPVKGKKGPEQFAVDEHPRPETTIEQLAKLPAVFKK 899
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 35.1 bits (77), Expect = 0.072
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 589 MGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYEAKAFVDEL 717
MG+ A+ A ++RQ+QDEYA+ S+ + A +A D L
Sbjct: 13 MGHSADRLASAFHVSRQEQDEYALRSHTLAHQATQAGKLTDVL 55
>SB_44112| Best HMM Match : PA14 (HMM E-Value=5e-05)
Length = 1433
Score = 29.9 bits (64), Expect = 2.7
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +1
Query: 541 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 699
DG+VFD ++ + M C+ N K + +Q E+ +Y R +A A
Sbjct: 1214 DGVVFDAAIELAHPSDMWVCSTN--KMGALVQQRLIEHHRKNYPRLSATIRFDPDPSVAH 1271
Query: 700 AFVDELVPVPVPQKRGAPV 756
+ + PVPVP KRG V
Sbjct: 1272 RYRKQERPVPVPGKRGEKV 1290
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -2
Query: 269 ISSLGIPALSIAALTATAPNSDADKLDKLPRKEPIGVLTADAITTSLRETLVENAAIAVN 90
I+S +P + L AT S L+K +E + A A+ T + TLVE + VN
Sbjct: 972 ITSTSVPEQNATVLPATTFQS----LNKTTTEESVVEPNATAVPTRVNATLVETTGMPVN 1027
Query: 89 I 87
+
Sbjct: 1028 V 1028
>SB_36506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +3
Query: 285 WQCLFCKFGPSTCKTSCNICRFAKKY-HMYNCK-QSMCLWHEIYNVGSTR 428
W+C K PS ++ + F KKY H + +S LW+ Y + + R
Sbjct: 80 WECEHVKPVPSDVRSKMRLSGFYKKYLHAFGIPVRSNTLWYRTYAMSTDR 129
>SB_53775| Best HMM Match : Involucrin2 (HMM E-Value=7.1e-12)
Length = 1879
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 53 TSSYWTLTSYCRYLQQWQHSR 115
TS YW LT+ CR+ H R
Sbjct: 1215 TSEYWPLTALCRWTSDMSHVR 1235
>SB_42687| Best HMM Match : UPF0262 (HMM E-Value=2.1)
Length = 908
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Frame = +1
Query: 541 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 699
DG+ FD + + +M C+ N L +Q E+ +Y R A A
Sbjct: 564 DGVAFDAAIEQAHSSYMWVCSTNKIGAL--VQQRLIEHHRKNYPRLPATIRFDPDPSVAH 621
Query: 700 AFVDELVPVPVPQKRGAPVI 759
+ + PVPVP KRG V+
Sbjct: 622 CYRKQGRPVPVPGKRGEKVV 641
>SB_7259| Best HMM Match : ResIII (HMM E-Value=0.21)
Length = 956
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 541 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 699
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 735 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 792
Query: 700 AFVDELVPVPVPQKRGAPV 756
+ + PVPVP KRG V
Sbjct: 793 RYRKQGRPVPVPGKRGEKV 811
>SB_51340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4529
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +3
Query: 285 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCL 395
WQ + + GP KTSC +C KY++ N CL
Sbjct: 864 WQSNYTQCGPCASKTSCPVCNI--KYNL-NDLMIQCL 897
>SB_50233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 967
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 541 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 699
DG+ FD + + M C+ N K + +Q E+ +Y R A A
Sbjct: 707 DGVAFDAAIEQAHPSDMWVCSTN--KMGALVQQQLVEHHRKNYPRLPAIIRFDPDPSVAH 764
Query: 700 AFVDELVPVPVPQKRGAPV 756
+ + PVPVP KRGA V
Sbjct: 765 RYRKQGRPVPVPGKRGAKV 783
>SB_27914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/102 (26%), Positives = 41/102 (40%)
Frame = +1
Query: 238 IERAGIPKEEIKEVYIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIML 417
I + GI EEI +V A + + + G PKS +CT+VN+V G+ +
Sbjct: 72 IVKVGITTEEIDY----HVHKAIIEHGAYPSPLNYRGFPKS-VCTSVNEVAVHGIPNSRC 126
Query: 418 AAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYGGMQLVD 543
G + GG+ F + G G +LVD
Sbjct: 127 LQNGDLLSVDISLFYGGVHGDLCETFLV--GNVDESGRRLVD 166
>SB_27146| Best HMM Match : LIM (HMM E-Value=9.7)
Length = 296
Score = 28.3 bits (60), Expect = 8.2
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 541 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 699
DG+ FD + D + M C+ N K + +Q E+ +Y R A A
Sbjct: 102 DGVAFDAVIDQAHPSDMWVCSTN--KMGALVQQRLVEHHRKNYPRLPATIRFDPDPSVAH 159
Query: 700 AFVDELVPVPVPQKRGAPV 756
+ + PVPVP KRG V
Sbjct: 160 RYRKQGRPVPVPGKRGEKV 178
>SB_21674| Best HMM Match : LIM (HMM E-Value=0.44)
Length = 885
Score = 28.3 bits (60), Expect = 8.2
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Frame = +1
Query: 541 DGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNSYKRSAAAYE-------AK 699
DG+ FD + ++ M C+ N K + +Q E+ + Y R A A
Sbjct: 664 DGVAFDAAIEQAHRSDMWVCSTN--KMGALVQQRLVEHHMKKYPRLPATIRFDPDPSVAH 721
Query: 700 AFVDELVPVPVPQKRGAPV 756
+ + PVPVP KRG V
Sbjct: 722 RYRKQGRPVPVPGKRGEKV 740
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,673,665
Number of Sequences: 59808
Number of extensions: 489636
Number of successful extensions: 1466
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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