Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M06
(843 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative ... 218 4e-57
At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative ... 215 4e-56
At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative ... 202 3e-52
At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative ... 202 3e-52
At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative ... 202 3e-52
At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative ... 201 4e-52
At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 / 3-keto... 89 3e-18
At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 / 3-keto... 89 3e-18
At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative ... 88 6e-18
At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative ... 81 9e-16
At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] syntha... 30 2.2
At3g53680.1 68416.m05928 PHD finger transcription factor, putati... 29 3.9
At5g48120.1 68418.m05944 expressed protein low similarity to MMS... 29 5.1
At4g24970.1 68417.m03578 ATP-binding region, ATPase-like domain-... 29 5.1
At3g46570.1 68416.m05055 glycosyl hydrolase family 17 protein si... 28 6.8
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 6.8
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 6.8
At2g34710.1 68415.m04263 homeobox-leucine zipper transcription f... 28 8.9
>At5g48230.2 68418.m05959 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 403
Score = 218 bits (532), Expect = 4e-57
Identities = 119/246 (48%), Positives = 151/246 (61%), Gaps = 3/246 (1%)
Frame = +1
Query: 100 MAAFSTKVSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEV 279
MA S V+ +V I RTPM + AA++RA + ++EV
Sbjct: 1 MAHTSESVNPRDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEV 60
Query: 280 YIGNVCSANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIIL 459
GNV SANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++
Sbjct: 61 VFGNVLSANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVV 120
Query: 460 AGGMESMSNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQIT 633
AGGMESMSN P YL R + +G LVDG++ DGL DVYN MG+CAE A+K QIT
Sbjct: 121 AGGMESMSNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQIT 180
Query: 634 RQDQDEYAVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNFEKFTK 810
R+ QD+YAV S++R AA EA AF E+VPV V RG P I + E + + K K
Sbjct: 181 REQQDDYAVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRK 240
Query: 811 LSTVFQ 828
L F+
Sbjct: 241 LRPSFK 246
>At5g48230.1 68418.m05958 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 398
Score = 215 bits (524), Expect = 4e-56
Identities = 116/239 (48%), Positives = 148/239 (61%), Gaps = 3/239 (1%)
Frame = +1
Query: 121 VSLNEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCS 300
V ++V I RTPM + AA++RA + ++EV GNV S
Sbjct: 3 VDESDVCIVGVARTPMGGFLGSLSSLPATKLGSLAIAAALKRANVDPALVQEVVFGNVLS 62
Query: 301 ANLGQAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESM 480
ANLGQAPARQA + AG+P S ICTTVNKVCASGMK++M+AAQ +Q G D+++AGGMESM
Sbjct: 63 ANLGQAPARQAALGAGIPNSVICTTVNKVCASGMKAVMIAAQSIQLGINDVVVAGGMESM 122
Query: 481 SNVPFYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEY 654
SN P YL R + +G LVDG++ DGL DVYN MG+CAE A+K QITR+ QD+Y
Sbjct: 123 SNTPKYLAEARKGSRFGHDSLVDGMLKDGLWDVYNDCGMGSCAELCAEKFQITREQQDDY 182
Query: 655 AVNSYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNFEKFTKLSTVFQ 828
AV S++R AA EA AF E+VPV V RG P I + E + + K KL F+
Sbjct: 183 AVQSFERGIAAQEAGAFTWEIVPVEVSGGRGRPSTIVDKDEGLGKFDAAKLRKLRPSFK 241
>At5g47720.3 68418.m05894 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 202 bits (492), Expect = 3e-52
Identities = 106/235 (45%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Frame = +1
Query: 133 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 312
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 313 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 492
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 493 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 666
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 667 YKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNFEKFTKLSTVFQ 828
++R AA + F E+VPV V RG P V+ + E + + K KL F+
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKLKKLRPSFK 248
>At5g47720.2 68418.m05896 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 415
Score = 202 bits (492), Expect = 3e-52
Identities = 106/235 (45%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Frame = +1
Query: 133 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 312
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 313 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 492
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 493 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 666
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 667 YKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNFEKFTKLSTVFQ 828
++R AA + F E+VPV V RG P V+ + E + + K KL F+
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKLKKLRPSFK 248
>At5g47720.1 68418.m05893 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 405
Score = 202 bits (492), Expect = 3e-52
Identities = 106/235 (45%), Positives = 144/235 (61%), Gaps = 3/235 (1%)
Frame = +1
Query: 133 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 312
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 313 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 492
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 493 FYL--KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVNS 666
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+ S
Sbjct: 134 KYLPDARRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQS 193
Query: 667 YKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNFEKFTKLSTVFQ 828
++R AA + F E+VPV V RG P V+ + E + + K KL F+
Sbjct: 194 FERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKLKKLRPSFK 248
>At5g47720.4 68418.m05895 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative strong similarity to
Acetoacetyl-coenzyme A thiolase (E.C. 2.3.1.9) [Raphanus
sativus] GI:1542941; contains InterPro accession
IPR002155: Thiolase
Length = 406
Score = 201 bits (491), Expect = 4e-52
Identities = 106/236 (44%), Positives = 144/236 (61%), Gaps = 4/236 (1%)
Frame = +1
Query: 133 EVVIASAVRTPMXXXXXXXXXXXXXXXXXXXVNAAIERAGIPKEEIKEVYIGNVCSANLG 312
+V + RTP+ + AA++RA + ++EV+ GNV +ANLG
Sbjct: 14 DVCVVGVARTPIGDFLGSLSSLTATRLGSIAIQAALKRAHVDPALVEEVFFGNVLTANLG 73
Query: 313 QAPARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVP 492
QAPARQA + AG+P S ICTT+NKVCA+GMKS+MLA+Q +Q G DI++AGGMESMSNVP
Sbjct: 74 QAPARQAALGAGIPYSVICTTINKVCAAGMKSVMLASQSIQLGLNDIVVAGGMESMSNVP 133
Query: 493 FYL---KRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 663
YL R + G +VDG++ DGL DVYN F MG C E A + +ITR++QD YA+
Sbjct: 134 KYLPDASRRGSRLGHDTVVDGMMKDGLWDVYNDFGMGVCGEICADQYRITREEQDAYAIQ 193
Query: 664 SYKRSAAAYEAKAFVDELVPVPVPQKRGAP-VIFAEXEXYKRVNFEKFTKLSTVFQ 828
S++R AA + F E+VPV V RG P V+ + E + + K KL F+
Sbjct: 194 SFERGIAAQNTQLFAWEIVPVEVSTGRGRPSVVIDKDEGLGKFDAAKLKKLRPSFK 249
>At5g48880.2 68418.m06047 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 457
Score = 89.4 bits (212), Expect = 3e-18
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Frame = +1
Query: 130 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 306
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 49 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 108
Query: 307 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 483
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 109 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 168
Query: 484 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 663
++ G + D F D MG +EN A++ +TR++QD AV
Sbjct: 169 T--DHIPGGGFHGSNPRAQD---FPKARDCL--LPMGITSENVAERFGVTREEQDMAAVE 221
Query: 664 SYKRSAAAYEAKAFVDELVPV------PVPQKRGAPVIFAEXEXYKRVNFEKFTKLSTVF 825
S+KR+AAA + DE++PV P + A V+ + N KL TVF
Sbjct: 222 SHKRAAAAIASGKLKDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVF 281
Query: 826 QR 831
++
Sbjct: 282 KQ 283
>At5g48880.1 68418.m06046 acetyl-CoA C-acyltransferase 1 /
3-ketoacyl-CoA thiolase 1 (PKT1) identical to
3-keto-acyl-CoA-thiolase 1 [Arabidopsis thaliana]
GI:3169568
Length = 414
Score = 89.4 bits (212), Expect = 3e-18
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Frame = +1
Query: 130 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 306
+++VI +A RT + V A +ER + E+ ++ +G V +
Sbjct: 6 DDIVIVAAYRTAICKARRGGFKDTLPDDLLASVLKAVVERTSLDPSEVGDIVVGTVIAPG 65
Query: 307 LGQA-PARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 483
+A R A FAG P S TVN+ C+SG++++ A ++ G DI + G+ESMS
Sbjct: 66 SQRAMECRVAAYFAGFPDSVPVRTVNRQCSSGLQAVADVAASIRAGYYDIGIGAGVESMS 125
Query: 484 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 663
++ G + D F D MG +EN A++ +TR++QD AV
Sbjct: 126 T--DHIPGGGFHGSNPRAQD---FPKARDCL--LPMGITSENVAERFGVTREEQDMAAVE 178
Query: 664 SYKRSAAAYEAKAFVDELVPV------PVPQKRGAPVIFAEXEXYKRVNFEKFTKLSTVF 825
S+KR+AAA + DE++PV P + A V+ + N KL TVF
Sbjct: 179 SHKRAAAAIASGKLKDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVF 238
Query: 826 QR 831
++
Sbjct: 239 KQ 240
>At2g33150.1 68415.m04062 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 462
Score = 88.2 bits (209), Expect = 6e-18
Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 2/201 (0%)
Frame = +1
Query: 130 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 306
++VVI +A RTP+ V A IE+ + E+ ++ +G V +
Sbjct: 50 DDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPG 109
Query: 307 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 483
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 110 SQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 169
Query: 484 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 663
P ++ G V+ V MG +EN A++ ++RQ+QD+ AV+
Sbjct: 170 TNPM-------AWEGS--VNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVD 220
Query: 664 SYKRSAAAYEAKAFVDELVPV 726
S++++AAA A F DE++PV
Sbjct: 221 SHRKAAAATAAGKFKDEIIPV 241
>At1g04710.1 68414.m00468 acetyl-CoA C-acyltransferase, putative /
3-ketoacyl-CoA thiolase, putative similar to
3-ketoacyl-CoA thiolase (E.C. 2.3.1.16) from
[Arabidopsis thaliana] GI:2981616, [Cucumis sativus]
GI:393707, [Cucurbita cv. Kurokawa Amakuri] GI:1694621;
contains InterPro accession IPR002155: Thiolase
Length = 443
Score = 81.0 bits (191), Expect = 9e-16
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Frame = +1
Query: 130 NEVVIASAVRTPMXXXXXXXXXXXXXXXXXXXV-NAAIERAGIPKEEIKEVYIGNVCSAN 306
++VVI +A RT + V A IE+ + E+ ++ +G V
Sbjct: 42 DDVVIVAAQRTALCKAKRGSFKDTFPDELLASVLRALIEKTNVNPSEVGDIVVGTVLGPG 101
Query: 307 LGQAP-ARQAVIFAGLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMS 483
+A R A +AG P++ TVN+ C+SG++++ A ++ G DI + G+ESM+
Sbjct: 102 SQRASECRMAAFYAGFPETVPIRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMT 161
Query: 484 NVPFYLKRGETSYGGMQLVDGIVFDGLTDVYNKFHMGNCAENTAKKLQITRQDQDEYAVN 663
P RG + G + F+ + MG +EN A + ++R++QD+ AV+
Sbjct: 162 TNP----RG---WKGSVNPNVKKFEQAHNCL--LPMGITSENVAHRFNVSREEQDQAAVD 212
Query: 664 SYKRSAAAYEAKAFVDELVPV 726
S++++A+A + F DE+ PV
Sbjct: 213 SHRKAASATASGKFKDEITPV 233
>At2g04540.1 68415.m00460 3-oxoacyl-[acyl-carrier-protein] synthase
II, putative similar to Swiss-Prot:P56902
3-oxoacyl-[acyl-carrier-protein] synthase II (EC
2.3.1.41) (Beta- ketoacyl-ACP synthase II) (KAS II)
[Rhizobium meliloti]
Length = 461
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 388 CASGMKSIMLAAQGLQTGAQDIILAGGMES 477
CA+G SI A + +Q G D+++AGG ES
Sbjct: 209 CATGAHSIGDATRMIQFGDADVMVAGGTES 238
>At3g53680.1 68416.m05928 PHD finger transcription factor, putative
predicted proteins, Arabidopsis thaliana
Length = 839
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 285 WQCLFCKFGPSTCKTSCNICRFAKKYHMYNCKQSMCLWHEIYNVG--STRSTNWS 443
W C C GP TSC I + Y +N ++ + H Y++ S RS ++S
Sbjct: 523 WYCSSCNDGP----TSCKIATASWLYTYFNLNANILVLHSAYSLSPISDRSHDFS 573
>At5g48120.1 68418.m05944 expressed protein low similarity to MMS19
[Mus musculus] GI:14029390
Length = 1152
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +1
Query: 346 GLPKSTICTTVNKVCASGMKSIMLAAQGLQTGAQDIILAGGMESMSNVPFYLKRGETSYG 525
GLP I ++VC++G K + QGL+ + +ES FYL+ G
Sbjct: 605 GLPYQMILEATSEVCSTGPKYVEKMVQGLEEAFCSSLSDFYIESFLVSNFYLETTCQVNG 664
Query: 526 GMQLVD 543
+ +D
Sbjct: 665 NFESID 670
>At4g24970.1 68417.m03578 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 707
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 457 LAGGMESMSNVPFYLKRGETSYGGMQLVD 543
+AGG+E + N LKRG ++GG VD
Sbjct: 44 VAGGLEKVGNNFVGLKRGRDTFGGSSEVD 72
>At3g46570.1 68416.m05055 glycosyl hydrolase family 17 protein
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 356
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 233 ALTATAPNSDADKLDKL--PRKEPIGVLTADAITTSLRETLVENAAIAVNICNKTL 72
+LT T PNSD L KL R L +TTS+R V N +A + +KTL
Sbjct: 77 SLTVTVPNSDIISLSKLSNARSWLSDNLLPFLLTTSIRYIAVGNEVVATS--DKTL 130
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -2
Query: 560 PSNTIPSTNC-IPPYEVSP 507
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
Frame = -2
Query: 560 PSNTIPSTNC-IPPYEVSP 507
PS+T PS+NC PPY+ SP
Sbjct: 49 PSHTPPSSNCGSPPYDPSP 67
>At2g34710.1 68415.m04263 homeobox-leucine zipper transcription
factor (HB-14) identical to homeodomain transcription
factor (ATHB-14)GP:3132474 GB:Y11122 [Arabidopsis
thaliana];
Length = 852
Score = 27.9 bits (59), Expect = 8.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 438 WSPRYNTCWWDGIYVKC 488
W+ RY+TC DG YV C
Sbjct: 284 WTLRYSTCLEDGSYVVC 300
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,348,198
Number of Sequences: 28952
Number of extensions: 324668
Number of successful extensions: 907
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 901
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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