Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M03
(771 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical pr... 228 4e-60
AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical ... 205 2e-53
Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z92829-11|CAE17737.1| 257|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical p... 29 4.8
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 29 4.8
Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical p... 28 6.4
Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical p... 28 6.4
Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical p... 28 6.4
AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine r... 28 8.5
>Z93386-5|CAB07646.1| 473|Caenorhabditis elegans Hypothetical
protein R11H6.1 protein.
Length = 473
Score = 228 bits (557), Expect = 4e-60
Identities = 108/199 (54%), Positives = 140/199 (70%)
Frame = +2
Query: 173 LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRD 352
L +F+ +D + D+ K+LL+EAVAI SVS D R + IRMVHWM++KL+ +G EL D
Sbjct: 5 LTNVFQQIDGDYDNLKELLREAVAIQSVSGDPSKRDETIRMVHWMKEKLETIGTICELAD 64
Query: 353 VGFQTIDGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEK 532
+G Q ++GK V+ +D K T+ +YGHLDVQPA KSDGW+TEPFELVE++ K
Sbjct: 65 LGTQELEGKTVKLPPVLLGTLGSDKNKKTLLVYGHLDVQPAAKSDGWDTEPFELVEKDGK 124
Query: 533 LYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEESGSEGLDSLLMDKLKPE 712
L+GRGS+DDKGPVL W H I A + G +LPVN+KF E MEESGS GL LL + + +
Sbjct: 125 LFGRGSSDDKGPVLCWFHAIRAAQKNGIDLPVNIKFCLEGMEESGSVGLPELL--EREKD 182
Query: 713 GFFDSVDYVCISDNYWLGT 769
F VD+VCISD+YWLGT
Sbjct: 183 RFLAGVDFVCISDSYWLGT 201
>AC024859-4|AAK29983.4| 472|Caenorhabditis elegans Hypothetical
protein Y71H2AM.11 protein.
Length = 472
Score = 205 bits (501), Expect = 2e-53
Identities = 96/196 (48%), Positives = 125/196 (63%), Gaps = 1/196 (0%)
Frame = +2
Query: 182 IFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGATTELRDVGF 361
+FK +D+ +D + LL+E+VAI SVS D R DC+RM W +D+LK +G T L ++G
Sbjct: 7 VFKSIDERQDEFIDLLRESVAIQSVSADPARRGDCVRMSEWARDQLKTLGVETSLWELGQ 66
Query: 362 QTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNEKLY 538
QT+ G+ + D K T+ IYGHLDVQPA K DGW T PFEL E + KL+
Sbjct: 67 QTLPSGEQLPLPPAVFGVYGRDKSKKTLLIYGHLDVQPAEKEDGWNTNPFELTEIDGKLF 126
Query: 539 GRGSTDDKGPVLGWLHTINAYKGTGAELPVNLKFIFECMEESGSEGLDSLLMDKLKPEGF 718
GRGSTDDKGPV+ W+ + + G +LP+N+KF+ ECMEES SEGLD L D +
Sbjct: 127 GRGSTDDKGPVIAWIAVLKVLQTLGIDLPINIKFVLECMEESSSEGLDKGLEDNIDK--- 183
Query: 719 FDSVDYVCISDNYWLG 766
V + CISDNYWLG
Sbjct: 184 ISDVTFSCISDNYWLG 199
>Z68214-4|CAA92447.1| 397|Caenorhabditis elegans Hypothetical
protein C10C5.4 protein.
Length = 397
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 419 NDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDKGPVLGWLHTIN 595
+ P+ ++ +Y H DV P + + W +P+ + + ++ RG+ D K LG H +
Sbjct: 63 SQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDTK--CLGVQH-VE 118
Query: 596 AYKGTGAE 619
A++ A+
Sbjct: 119 AFRNLFAK 126
>Z82269-1|CAB05205.2| 651|Caenorhabditis elegans Hypothetical
protein F52G2.3 protein.
Length = 651
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = -2
Query: 686 SCQALRNQIPPYIRK*TSN*QAAQHQCPYR 597
SC +LR Q P RK + Q Q+Q PYR
Sbjct: 219 SCDSLRPQPVPAARKLSEQPQTVQNQAPYR 248
>Z92829-11|CAE17737.1| 257|Caenorhabditis elegans Hypothetical
protein F10A3.16 protein.
Length = 257
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -2
Query: 770 WFPTNSYRIYIHSX-HYQRIPQVSICPLISC 681
W+ + YR Y H ++Q IP++S C +I C
Sbjct: 136 WY--SDYRKYFHQLQNFQAIPRISFCSIIVC 164
>Z68214-5|CAA92446.2| 397|Caenorhabditis elegans Hypothetical
protein C10C5.5 protein.
Length = 397
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 419 NDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDK 562
+ P+ ++ +Y H DV P + + W +P+ + + ++ RG+ D K
Sbjct: 63 SQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDMK 110
>Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical
protein C10C5.3 protein.
Length = 399
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 419 NDPKKNTVCIYGHLDVQPALKSDGWETEPFE-LVERNEKLYGRGSTDDK 562
+ P+ ++ +Y H DV P + + W +P+ + + ++ RG+ D K
Sbjct: 63 SQPELPSIMLYSHTDVVPTFR-EHWTHDPYSAFKDEDGNIFARGAQDMK 110
>Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical
protein W02B12.7 protein.
Length = 471
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 110 YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSC 262
Y+ H + Q++ T+P++ + + K+ K L +E+ PS SC
Sbjct: 11 YNNHTNDLKHQIAQLERKTATIPKLENQLHKAKNQNKVLRRESALFPSASC 61
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 110 YHQHYSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSC 262
Y+ H + Q++ T+P++ + + K+ K L +E+ PS SC
Sbjct: 145 YNNHTNDLKHQIAQLERKTATIPKLENQLHKAKNQNKVLRRESALFPSASC 195
>Z73896-8|CAA98061.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 375 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 271
PS++ ++ SV+A S+NL + IR +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184
>Z73422-12|CAJ76980.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.9 protein.
Length = 525
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 375 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 271
PS++ ++ SV+A S+NL + IR +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184
>Z73422-11|CAA97768.1| 423|Caenorhabditis elegans Hypothetical
protein B0564.6b protein.
Length = 423
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 375 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 271
PS++ ++ SV+A S+NL + IR +A+Y
Sbjct: 48 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 82
>Z73422-10|CAA97772.1| 525|Caenorhabditis elegans Hypothetical
protein B0564.6a protein.
Length = 525
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = -1
Query: 375 PSIV*KPTSLNSVVAPTSFNLSCIQ*TIRMQSARY 271
PS++ ++ SV+A S+NL + IR +A+Y
Sbjct: 150 PSVIRDSVAMASVIAQCSYNLQTLDLKIRSDNAKY 184
>AF067945-16|AAC17675.1| 341|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 12 protein.
Length = 341
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 102 FLLIINIIQ*VPNKFLQKWQRKKH 173
FL+I+N+ + N+FL+ W KK+
Sbjct: 172 FLMILNLFALLTNQFLRTWNLKKY 195
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,425,083
Number of Sequences: 27780
Number of extensions: 401640
Number of successful extensions: 1089
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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