Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_M03
         (771 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g17830.1 68417.m02659 peptidase M20/M25/M40 family protein si...    42   5e-04
At1g44820.1 68414.m05134 aminoacylase, putative / N-acyl-L-amino...    34   0.12 
At1g62570.1 68414.m07059 flavin-containing monooxygenase family ...    30   1.9  
At2g17530.1 68415.m02028 protein kinase family protein identical...    28   5.9  
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf...    28   7.9  
At3g48320.1 68416.m05273 cytochrome P450 71A21, putative (CYP71A...    28   7.9  

>At4g17830.1 68417.m02659 peptidase M20/M25/M40 family protein
           similar to acetylornithine deacetylase
           (Acetylornithinase, AO; N-acetylornithinase, NAO)
           [Dictyostelium discoideum] SWISS-PROT:P54638
          Length = 440

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
 Frame = +2

Query: 455 HLDVQPALKSDGWETEPFELVERNEKLYGRGSTDDKGPVLGWLHTINAYKGTGAELPVNL 634
           H+DV  A   D WE +PF L    +KL GRG+TD  G V      +         L   +
Sbjct: 101 HMDVVTA-NPDDWEFDPFSLSIDGDKLRGRGTTDCLGHVALVTELMKKLGQAKPALKSTV 159

Query: 635 KFIFECMEESGS---EGLDSLLMDKL 703
             +F   EE+ S    G+D L+ DKL
Sbjct: 160 VAVFIASEENSSIPGVGVDMLVKDKL 185


>At1g44820.1 68414.m05134 aminoacylase, putative /
           N-acyl-L-amino-acid amidohydrolase, putative similar to
           aminoacylase-1 (N-acyl-L-amino-acid amidohydrolase
           ACY-1)[Homo sapiens] SWISS-PROT:Q03154
          Length = 438

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
 Frame = +2

Query: 419 NDPKKNTVCIYGHLDVQPALKSDGWETEPFELVERNE-KLYGRGSTDDKGPVLGWLHTIN 595
           ++P   ++    HLD  PA +S+ W   PF   +  +  +Y RG+ DDK   + +L +I 
Sbjct: 85  SNPNLPSILFNSHLDSVPA-ESEKWTYPPFSAHKTIDGHIYARGAQDDKCIGVQYLESIR 143

Query: 596 AYKGTGAELPVNLKFIFECMEESGSEGLDSLL 691
             K  G      +   +   EE G  G D ++
Sbjct: 144 NLKSRGFSPLRTIHISYVPEEEIG--GFDGMM 173


>At1g62570.1 68414.m07059 flavin-containing monooxygenase family
           protein / FMO family protein low similarity to
           flavin-containing monooxygenase FMO3 [Rattus norvegicus]
           GI:12006730; contains Pfam profile PF00743:
           Flavin-binding monooxygenase-like
          Length = 461

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 19/64 (29%), Positives = 33/64 (51%)
 Frame = +2

Query: 122 YSVSSKQVSAKMATEKTLPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVH 301
           + V SK V+A ++   TLP + + +D  K SY+   +EA+ IP        ++ C   + 
Sbjct: 337 FEVQSKWVAAVLSGRVTLPSVDEMMDDLKLSYE--TQEALGIPKRYTHKLGKSQC-EYLD 393

Query: 302 WMQD 313
           W+ D
Sbjct: 394 WIAD 397


>At2g17530.1 68415.m02028 protein kinase family protein identical to
           SRPK2 [Arabidopsis thaliana] gi|9843645|emb|CAC03676;
           contains protein kinase domain, Pfam:PF00069
          Length = 440

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +1

Query: 349 GCWLSNNRWQRRSTAASFSRRIG**SKKKYSLYLWSFGCTTCFEI 483
           GCW  N   +   T    +  +   S   YS+ +WSF C T FE+
Sbjct: 263 GCWADNKFAEEIQTRQYRAPEVILQSGYSYSVDMWSFAC-TAFEL 306


>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
           PF00400: WD domain, G-beta repeat; similar to WD-repeat
           protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
           sapiens]
          Length = 709

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -3

Query: 664 RFLHTFENELQIDRQLS 614
           RF HT +N+LQ+DR +S
Sbjct: 471 RFYHTTDNQLQLDRDIS 487


>At3g48320.1 68416.m05273 cytochrome P450 71A21, putative (CYP71A21)
           identical to Cytochrome P450 71A21 (SP:Q9STL2)
           [Arabidopsis thaliana]
          Length = 490

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
 Frame = +2

Query: 494 ETEPFELVERNEKLYGRGSTDDKGPVLGWLHTINAYKG----TGAELPVNL-KFIFECME 658
           ET+  EL++R   L G  S     P LGW+  I+   G    TG +L   L K + + ++
Sbjct: 193 ETDSKELMKRLMMLMGEFSVGTYVPWLGWIDWISGLDGQLNKTGNDLDEFLEKVVQDHVD 252

Query: 659 ESG--SEGLDSLL-MDKLKPEGFFDSVDYVCI 745
             G  ++ +D LL + + K  GF   +D +CI
Sbjct: 253 GDGQRTDFVDVLLRIQREKSIGF--EIDRLCI 282


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,187,241
Number of Sequences: 28952
Number of extensions: 365226
Number of successful extensions: 979
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1716774400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)