Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_M02
(434 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 284 2e-77
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 282 8e-77
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 282 8e-77
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 282 8e-77
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 282 8e-77
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 282 8e-77
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 280 3e-76
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 280 3e-76
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 279 4e-76
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 257 3e-69
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 239 8e-64
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 238 1e-63
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 166 5e-42
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 134 2e-32
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 118 2e-27
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 87 4e-18
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 83 1e-16
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 66 1e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 60 8e-10
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 40 0.001
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 40 0.001
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 30 0.77
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.4
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 28 2.4
At1g12470.1 68414.m01441 Pep3/Vps18/deep orange family protein c... 28 3.1
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 27 5.5
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 27 5.5
At3g28790.1 68416.m03593 expressed protein 27 7.2
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 26 9.5
At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein heli... 26 9.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 26 9.5
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 284 bits (697), Expect = 2e-77
Identities = 133/144 (92%), Positives = 136/144 (94%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHGI++NWDDMEKIWHH FY ELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTDYLM ILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 282 bits (691), Expect = 8e-77
Identities = 132/144 (91%), Positives = 135/144 (93%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHGI+ NWDDMEKIWHH FY ELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTD+LM ILTERG
Sbjct: 176 AILRLDLAGRDLTDHLMKILTERG 199
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 282 bits (691), Expect = 8e-77
Identities = 132/144 (91%), Positives = 135/144 (93%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHGI+ NWDDMEKIWHH FY ELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 116 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTD+LM ILTERG
Sbjct: 176 AILRLDLAGRDLTDHLMKILTERG 199
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 282 bits (691), Expect = 8e-77
Identities = 130/144 (90%), Positives = 136/144 (94%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHG+++NWDDMEKIWHH FY ELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY G++L H
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTDYLM ILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 282 bits (691), Expect = 8e-77
Identities = 130/144 (90%), Positives = 136/144 (94%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHG+++NWDDMEKIWHH FY ELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY G++L H
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTDYLM ILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 282 bits (691), Expect = 8e-77
Identities = 130/144 (90%), Positives = 136/144 (94%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHG+++NWDDMEKIWHH FY ELR+APEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY G++L H
Sbjct: 116 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTDYLM ILTERG
Sbjct: 176 AILRLDLAGRDLTDYLMKILTERG 199
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 280 bits (686), Expect = 3e-76
Identities = 131/144 (90%), Positives = 134/144 (93%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHGI+ NWDDMEKIWHH FY ELRVAPEEHP+LLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTD LM ILTERG
Sbjct: 176 AILRLDLAGRDLTDALMKILTERG 199
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 280 bits (686), Expect = 3e-76
Identities = 131/144 (90%), Positives = 134/144 (93%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHGI+ NWDDMEKIWHH FY ELRVAPEEHP+LLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 116 ANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTD LM ILTERG
Sbjct: 176 AILRLDLAGRDLTDALMKILTERG 199
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 279 bits (685), Expect = 4e-76
Identities = 132/144 (91%), Positives = 134/144 (93%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA SKRGILTLKYPIEHGI++NWDDMEKIWHH FY ELRVAPEEHPVLLTEAPLNPK
Sbjct: 56 VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK 115
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 116 ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 175
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLTD LM ILTERG
Sbjct: 176 AILRLDLAGRDLTDSLMKILTERG 199
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 257 bits (629), Expect = 3e-69
Identities = 115/144 (79%), Positives = 129/144 (89%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGDEA ++RGIL+LKYPIEHG+++NWDDMEKIWHH FY ELR+ PEEHP+LLTEAPLNPK
Sbjct: 57 VGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPK 116
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGI LDSGDGVSHTVPIY GYAL H
Sbjct: 117 VNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPH 176
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGRDLT+YL I+ ERG
Sbjct: 177 AILRLDLAGRDLTEYLTKIMMERG 200
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 239 bits (584), Expect = 8e-64
Identities = 109/144 (75%), Positives = 125/144 (86%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VGD+A ++ GILTL YP+EHG+++NWDDMEKIW+H FY ELRVAPEEHPVLLTEAPLNPK
Sbjct: 11 VGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPK 70
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
A+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG LDSGDGVS+ VPIY G AL H
Sbjct: 71 ADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPH 130
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDLAGR LT+YLM I+ ERG
Sbjct: 131 AILRLDLAGRHLTNYLMKIMMERG 154
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 238 bits (583), Expect = 1e-63
Identities = 108/144 (75%), Positives = 124/144 (86%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VG+E + R ILTLK P+EHGI+ NWDDMEKIWH+ FY ELRV PEEHPVLLTEAP NPK
Sbjct: 45 VGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPK 104
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
ANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+ LD G+ VSHTVP+Y GYAL H
Sbjct: 105 ANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPH 164
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
ILRLDL GRDLTDYL+ I+TERG
Sbjct: 165 GILRLDLGGRDLTDYLIEIMTERG 188
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 166 bits (404), Expect = 5e-42
Identities = 70/144 (48%), Positives = 99/144 (68%)
Frame = +1
Query: 1 VGDEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
VG+ R L + YP+ +GI+ NWDDME +W H FY EL++ P + +LLT+ PLNP
Sbjct: 55 VGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPS 114
Query: 181 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXH 360
NREKM + MFE +N +++ IQAVL+LYA G TG+ +DSGDGV+H VP+ GY+ H
Sbjct: 115 KNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPH 174
Query: 361 XILRLDLAGRDLTDYLMXILTERG 432
R+++AGR +T YL+ +L+ RG
Sbjct: 175 LTKRMNVAGRHITAYLVDLLSRRG 198
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 134 bits (325), Expect = 2e-32
Identities = 66/152 (43%), Positives = 95/152 (62%), Gaps = 8/152 (5%)
Frame = +1
Query: 1 VGDEAXSK-RGILT--LKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPL 171
+GDEA +K R T L YPIEHG + +WD ME+ W + LR PE+H LLTE+PL
Sbjct: 70 IGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPL 129
Query: 172 NPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIXLDSGDGVSHTVPI 336
P +RE +I+FETFN P +Y+A+ +VL+L A T TG+ +D GDG +H VP+
Sbjct: 130 TPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPV 189
Query: 337 YXGYALXHXILRLDLAGRDLTDYLMXILTERG 432
GY + I + +AG+D+T ++ ++ ERG
Sbjct: 190 AEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 118 bits (284), Expect = 2e-27
Identities = 56/145 (38%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
Frame = +1
Query: 1 VGDEAXS-KRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNP 177
VG +A S +R + + PI+ GI+++WD ++ IW H F L + P EHP+LL E PLN
Sbjct: 77 VGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNT 136
Query: 178 KANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALX 357
+ REK ++MFE + PA+++A VL+ +A+GR T + +D G G + P++ GY L
Sbjct: 137 QQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQ 196
Query: 358 HXILRLDLAGRDLTDYLMXILTERG 432
++ L G LTD L+ L +G
Sbjct: 197 KAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 87.4 bits (207), Expect = 4e-18
Identities = 48/118 (40%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +1
Query: 49 PIEHGIITNWDDMEKIWHHXFYXELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 225
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 226 SPAMYVAIQAVLSLYASGRTTGIXLDSGDGVSHTVPIYXGYALXHXILRLDLAGRDLT 399
Y + QAVLSLYA GR +G +D G G P+ G R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 82.6 bits (195), Expect = 1e-16
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 10/140 (7%)
Frame = +1
Query: 40 LKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 219
++ PI+ G + N D +IW H F L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 220 FNSPAMYVA-IQAVLSLYASGR---------TTGIXLDSGDGVSHTVPIYXGYALXHXIL 369
F ++Y+A Q+++ LY + R + +D G +H VP+ + L H I
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 370 RLDLAGRDLTDYLMXILTER 429
R+DL G+ T+YL +++ R
Sbjct: 181 RIDLGGKAFTNYLKELVSYR 200
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 65.7 bits (153), Expect = 1e-11
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Frame = +1
Query: 49 PIEHGIITNWDDMEKIWHHXF-YXELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 225
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 226 SPAMYVAIQAVLS-----LYASGRTTGIXLDSGDGVSHTVPIYXGYALXHXILRLDLAGR 390
PA+ + A S L+ + GI L G +H++P G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 391 DLTDYLMXILT 423
+TDYL +L+
Sbjct: 205 HVTDYLKQLLS 215
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 59.7 bits (138), Expect = 8e-10
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 4 GDEAXS-KRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPK 180
G +A + +R + + P + GI+T+WD ++ +W H F L + P EHP+LL E PLN +
Sbjct: 72 GSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQ 131
Query: 181 ANREK 195
REK
Sbjct: 132 QQREK 136
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Frame = +1
Query: 112 YXELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQAVL 261
+ ++V P P++++ PL + KA+R ++ +F N PA+ QAVL
Sbjct: 184 FTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVL 242
Query: 262 SLYASGRTTGIXLDSGDGVSHTVPIYXG 345
+LYA+ RT+GI ++ G V +PI G
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.5 bits (88), Expect = 0.001
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 10/88 (11%)
Frame = +1
Query: 112 YXELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQAVL 261
+ ++V P P++++ PL + KA+R ++ +F N PA+ QAVL
Sbjct: 184 FTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQAVL 242
Query: 262 SLYASGRTTGIXLDSGDGVSHTVPIYXG 345
+LYA+ RT+GI ++ G V +PI G
Sbjct: 243 ALYAARRTSGIVVNIGFQVITILPILHG 270
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.9 bits (64), Expect = 0.77
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 213 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLXVEGVVPDLL 88
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -3
Query: 201 GHLLPVGLGVEGGFGEQHGVLLGGDTQLXVEGVVPD 94
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 7 DEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPKAN 186
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 187 REK 195
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.4
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 7 DEAXSKRGILTLKYPIEHGIITNWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPKAN 186
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 187 REK 195
REK
Sbjct: 225 REK 227
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -3
Query: 213 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLXVEGVVPDLL 88
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At1g12470.1 68414.m01441 Pep3/Vps18/deep orange family protein
contains Pfam profile PF05131: Pep3/Vps18/deep orange
family; similar to Vacuolar protein sorting 18 (hVPS18)
(SP:Q9P253) {Homo sapiens}
Length = 994
Score = 27.9 bits (59), Expect = 3.1
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Frame = +1
Query: 154 LTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG------RTTGIXLDSGDG 315
L E ++ K REK + +FE P + A+Q + +SG T L S G
Sbjct: 140 LFEMAVDEKDKREKYIKFLFELEELPEAFKALQMETANISSGMRYYVMAVTPTRLYSFTG 199
Query: 316 VSHTVPIYXGY---ALXHXILRLDLAGRDLTDYLMXIL 420
+ ++ Y A+ L ++ R + DYL IL
Sbjct: 200 IGTLESVFASYKERAVHFMELPGEIPNRQVLDYLRLIL 237
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 324 HRTHLXRLRSXPXHPPSGLGWSRLDRLPHEXPHREGL 434
H T +L P PP+ W+ + + P R+GL
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGL 384
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 27.1 bits (57), Expect = 5.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +3
Query: 324 HRTHLXRLRSXPXHPPSGLGWSRLDRLPHEXPHREGL 434
H T +L P PP+ W+ + + P R+GL
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGL 384
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2
Query: 317 SPTPYPSTKVTLXPTPSS 370
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 73 NWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 228
NW +E + + + P LL EA + PK+ E Q +++TF +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKN 545
>At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein helicase,
putative
Length = 2172
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 43 KYPIEHGIITNWDDMEKIWHHXFY-XELRVAPEEHPVLLT 159
KY II +D EKI HH ++ + RV E+H + T
Sbjct: 1241 KYVEPFWIIVEDNDGEKILHHEYFLFKKRVIDEDHTLNFT 1280
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 26.2 bits (55), Expect = 9.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 73 NWDDMEKIWHHXFYXELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 222
NW +E + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,882,221
Number of Sequences: 28952
Number of extensions: 138153
Number of successful extensions: 482
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 683042040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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