Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L19
         (842 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1138 - 9429447-9433868                                           33   0.38 
01_01_1214 - 9793854-9794003,9795418-9795456,9795604-9795702,979...    32   0.66 
03_05_0328 - 23170019-23170168,23170865-23170903,23171043-231711...    30   2.7  
06_01_1058 - 8502401-8502586,8502857-8502917,8503262-8503447,850...    29   6.1  

>06_01_1138 - 9429447-9433868
          Length = 1473

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -3

Query: 273 CFFFVRETHFEMSRHMGTELGNYKCFSHSADVSNDYH 163
           C+   R  H   S H+G E G ++ +S+ +DV N+ H
Sbjct: 280 CYILHRCQHQGTSDHVGGEYGRWQAYSYRSDVYNEIH 316


>01_01_1214 - 9793854-9794003,9795418-9795456,9795604-9795702,
            9795779-9795907,9796473-9796619,9797513-9797643,
            9798497-9798716,9798858-9798951,9799021-9799133,
            9799799-9799903,9800008-9800112,9800762-9800849,
            9800933-9801054,9801130-9801189,9802313-9802408,
            9802506-9802658,9802752-9802838,9803995-9804062,
            9804429-9804552,9805057-9805152,9805250-9805359,
            9805459-9805573,9806877-9806942,9807260-9807420,
            9807927-9808167
          Length = 972

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 21/72 (29%), Positives = 31/72 (43%)
 Frame = +3

Query: 603  FSFPITLCFNRDNSFPVHTTSVIL*VFSRIPTNYLTPKPFALMLVLQAFFISSIVKTAAP 782
            FS  IT   N D +  VH  S +      + T   T    A+   L AF+ ++I     P
Sbjct: 798  FSSHITFVLNLDTNTFVHIVSTLESGLKGLDTGISTQCASAIDS-LAAFYFNNITAADGP 856

Query: 783  PLPKRITASRHV 818
            P P  +  +RH+
Sbjct: 857  PSPAALNLARHI 868


>03_05_0328 - 23170019-23170168,23170865-23170903,23171043-23171141,
            23171214-23171342,23171915-23172061,23172959-23173089,
            23173938-23174157,23174294-23174387,23174469-23174581,
            23174727-23174861,23175231-23175335,23175440-23175544,
            23176240-23176327,23176415-23176536,23176611-23176670,
            23177434-23177529,23177620-23177772,23177865-23177951,
            23179179-23179246,23179603-23179726,23180235-23180330,
            23180430-23180539,23180647-23180761,23181622-23181699,
            23181843-23181908,23182203-23182363,23182781-23183099
          Length = 1069

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/72 (27%), Positives = 30/72 (41%)
 Frame = +3

Query: 603  FSFPITLCFNRDNSFPVHTTSVIL*VFSRIPTNYLTPKPFALMLVLQAFFISSIVKTAAP 782
            FS  IT   N D +  VH  S +      + T   T    A+   L AF+ ++      P
Sbjct: 895  FSNHITFVLNLDTNTFVHIVSTLESGLKGLDTGISTQCASAIDS-LAAFYFNNFTAADGP 953

Query: 783  PLPKRITASRHV 818
            P P  +  +RH+
Sbjct: 954  PSPAALNLARHI 965


>06_01_1058 -
           8502401-8502586,8502857-8502917,8503262-8503447,
           8503531-8503720,8503861-8504212
          Length = 324

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
 Frame = -1

Query: 698 GRNTREYS*YNRGCMHRKRVIPIEAQSYWE*EIRAFFSYNKFKNGYLYRTWEKILAAFER 519
           G+  +E + Y +G +H++++I + A +Y          Y KFK G   RT EK+L     
Sbjct: 220 GKTPKEIAEYKKG-LHKEKLITV-AYTY---------QYYKFKGGEQTRTREKLLLPRLE 268

Query: 518 EQDISTPQYV*N--KLLESFI*YQCCYHK 438
            Q       + N  + L  FI ++CC+ K
Sbjct: 269 RQTSFDDTCITNVQRDLCHFIYHECCHVK 297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,892,050
Number of Sequences: 37544
Number of extensions: 382120
Number of successful extensions: 735
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)