Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_L19
(842 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 29 0.041
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 26 0.38
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 26 0.38
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 26 0.38
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 25 0.87
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 2.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 2.0
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 2.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 2.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 24 2.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 2.0
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 2.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.1
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 29.5 bits (63), Expect = 0.041
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTSAVTTKRFHGMKSMFISLI 398
S NKT +N +K NY N++YN + + K ++ ++I
Sbjct: 317 SLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNII 359
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.38
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTS 452
S NKT +N +K NY N++YN +
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.38
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTS 452
S NKT +N +K NY N++YN +
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 26.2 bits (55), Expect = 0.38
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTS 452
S NKT +N +K NY N++YN +
Sbjct: 84 SLSNKTIHNNNNYKYNYNNNNYNNN 108
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTS 452
S N+T +N +K NY N++YN +
Sbjct: 84 SLSNRTIHNNNNYKYNYNNNNYNNN 108
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNNNY 105
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTSAVTTKRFHGM 422
S N T + +N +K NY N++YN + K ++ +
Sbjct: 83 SLSNNT-IHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTSAVTTKRFHGM 422
S N T + +N +K NY N++YN + K ++ +
Sbjct: 83 SLSNNT-IHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2
Query: 94 SHYQHHY*RNY*IGFLSYITFLFVLSISL 8
SH + Y +N IGF+ +TFL + S+ +
Sbjct: 866 SHLRELYLQNNLIGFIGNLTFLPLRSLEI 894
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.8 bits (49), Expect = 2.0
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = -2
Query: 526 SKENKTFLLHNMFKINYWNHSYNTSAVTTKRFHGMKSMFISLI 398
S NKT +N + N +N++YN ++ K ++ ++I
Sbjct: 317 SLSNKTIHNNNNYNNNNYNNNYNN--YNNNNYNNYKKLYYNII 357
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 2.7
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 136 LISSLKQKQTLSEFSHYQHHY*RNY 62
+ISSL S +++Y ++Y NY
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTNY 105
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 241 LKVSFSNEKKTVILIIRTYIP 303
L+VSF+ ++ T +I+ Y+P
Sbjct: 234 LQVSFNLQRHTGYFLIQVYVP 254
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.1
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 684 SRIPTNYLTPKPFALMLVLQAFFISSIVKTAAPPLPKRITASRHVIT 824
S +PT Y T K A+ + I+ + TAA + +H+ T
Sbjct: 916 SMMPTRYSTTKSSAVTATNASSMIAPVALTAA-TCDQNKAVKKHITT 961
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,274
Number of Sequences: 438
Number of extensions: 5202
Number of successful extensions: 35
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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