Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L18
         (772 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    26   0.34 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   4.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    22   5.5  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 26.2 bits (55), Expect = 0.34
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 466 SSETLTQRLLGRAASSGRADDNEETIKLR--LKTFLDNNDLVLAQYPDKLRR 615
           +S  +   L G   S+ R  +  +++     L T  DNN++V AQ+ ++L++
Sbjct: 380 ASSRMENNLRGETQSNYREMEKRQSVPANDLLTTEKDNNEIVTAQFLNQLKK 431


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/63 (20%), Positives = 31/63 (49%)
 Frame = +1

Query: 490 LLGRAASSGRADDNEETIKLRLKTFLDNNDLVLAQYPDKLRRINAERPVDEIFAEVQSIL 669
           +LG +       +N+E I  ++   L++   V+A   +KL    A +  + +F + ++I 
Sbjct: 91  ILGHSERRNIFGENDELIAEKVAHALESGLKVIACIGEKLEEREAGKTDEVVFRQTKAIA 150

Query: 670 DPL 678
           + +
Sbjct: 151 NKI 153


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 78  YVSFNFIKNGTHRYIEKANRVGPGRSRIR 164
           +V+ ++I +  HRY+E    +G   + +R
Sbjct: 369 HVAISYIHDPDHRYLESFGVMGDSATAMR 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,637
Number of Sequences: 438
Number of extensions: 4377
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)