Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L17
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.72 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    23   2.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          23   2.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.72
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 45  FFLICFYLHFC*FLI 89
           FFL+C Y  +C F+I
Sbjct: 141 FFLLCIYYFYCAFII 155



 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 48  FLICFYLHFC*FLI 89
           FL+C Y  FC F+I
Sbjct: 162 FLLCIYHFFCAFII 175



 Score = 21.8 bits (44), Expect = 6.7
 Identities = 5/21 (23%), Positives = 14/21 (66%)
 Frame = -2

Query: 174 HFXLKVNFFFWLNLLIRCIFF 112
           HF L   +F++  +++ C+++
Sbjct: 95  HFLLCTYYFYYAFIILLCVYY 115


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 383 VDPLK*LFFNNVLNSLCNFFE 321
           V+ L  LF N++L+ +C+ FE
Sbjct: 195 VNALDHLFLNDILSDICDKFE 215


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 383 VDPLK*LFFNNVLNSLCNFFE 321
           V+ L  LF N++L+ +C+ FE
Sbjct: 151 VNALDHLFLNDILSDICDKFE 171


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 552 YSYNSTR-NTLY-FNTIYSNY*NHQKYYS 632
           Y +N  + N  Y +N  YSNY N+Q+ +S
Sbjct: 204 YQFNDPQFNFNYQYNQAYSNYNNYQEGFS 232


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +3

Query: 552 YSYNSTR-NTLY-FNTIYSNY*NHQKYYS 632
           Y +N  + N  Y +N  YSNY N+Q+ +S
Sbjct: 224 YQFNDPQFNFNYQYNQAYSNYNNYQEGFS 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,835
Number of Sequences: 336
Number of extensions: 1880
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)