Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L14
         (351 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    35   2e-04
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   3.7  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    20   6.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    20   6.4  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   6.4  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 35.1 bits (77), Expect = 2e-04
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
 Frame = +1

Query: 1   TSSWGGKRAAIAGTVSCRND-ESLASIYKLIQXEAEKLLLCQK 126
           T +WG KRA    +  C+   +++  IYK+IQ EA+KL+ C+K
Sbjct: 24  TPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQKLVDCEK 65


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 70  PRIHRSCRTQC 38
           P++H  CR++C
Sbjct: 79  PQLHNLCRSEC 89


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 70  PRIHRSCRTQCRR 32
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 70  PRIHRSCRTQCRR 32
           PR  R  RTQC R
Sbjct: 85  PRALRRLRTQCER 97


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 108 TPAMPEALSRH 140
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,035
Number of Sequences: 336
Number of extensions: 1160
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)