Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_L10
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 7e-12
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 48 8e-06
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 46 3e-05
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 43 2e-04
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 40 0.002
SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 39 0.003
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 38 0.006
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 38 0.008
SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.019
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 33 0.13
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 33 0.13
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 33 0.13
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.13
SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.18
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 33 0.24
SB_34761| Best HMM Match : zf-CCHC (HMM E-Value=4.9e-08) 33 0.24
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 32 0.31
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.31
SB_31048| Best HMM Match : zf-CCHC (HMM E-Value=5.5e-05) 32 0.41
SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_23747| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 31 0.54
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 31 0.54
SB_35115| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06) 31 0.72
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064) 31 0.95
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046) 30 1.3
SB_18880| Best HMM Match : zf-CCHC (HMM E-Value=0.00013) 30 1.3
SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 30 1.7
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 30 1.7
SB_25619| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20) 30 1.7
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 29 2.2
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_52753| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06) 29 2.2
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 29 2.2
SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0) 29 2.9
SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34) 29 2.9
SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37) 29 2.9
SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05) 29 2.9
SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015) 29 2.9
SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023) 29 2.9
SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19) 29 2.9
SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38) 29 2.9
SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24) 29 3.8
SB_58404| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 28 5.1
SB_5738| Best HMM Match : zf-CCHC (HMM E-Value=0.37) 28 5.1
SB_19135| Best HMM Match : Ribosomal_L13e (HMM E-Value=0) 28 5.1
SB_58082| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_50978| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_47507| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_45492| Best HMM Match : zf-CCHC (HMM E-Value=2.9) 28 6.7
SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_11912| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26) 28 6.7
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_54349| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 27 8.8
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 27 8.8
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_759| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25) 27 8.8
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_37473| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_34021| Best HMM Match : Zip (HMM E-Value=0) 27 8.8
SB_14097| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 27 8.8
SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1) 27 8.8
SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMMVDGQPM 173
L DN E+ F +G + + + RN + F D D DA++EL+G + GQ +
Sbjct: 39 LGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRYICGQRV 98
Query: 174 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 281
+V+L+ R RP MG E+CY CGR GH++++C +
Sbjct: 99 RVELAKGPSRGRPRMGSNEKCYECGRVGHFARDCTR 134
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 67.7 bits (158), Expect = 7e-12
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +3
Query: 9 DNXRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
DN E+ F+ FG + + + RN + F + D DA++EL+G + GQ +V
Sbjct: 11 DNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDGRYICGQRARV 70
Query: 180 QLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 281
+L+ R RP E+CY CGR GH++++C +
Sbjct: 71 ELAKGPSRGRPRQASNEKCYECGRVGHFARDCTR 104
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 47.6 bits (108), Expect = 8e-06
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 9/118 (7%)
Frame = +3
Query: 6 TDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 185
TD ++ E+F + G V+ C + N+GFV + ++A+ + +G +++G+ + V++
Sbjct: 55 TDKIARQDLEEIFSRHGKVLGCSLHANFGFVQFETEKGADEAVAKEHGRIINGKKIDVRI 114
Query: 186 STSRV------RQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGF---RDRAFGRD 332
SR ++ G P++ R G + P PDR+G R R GRD
Sbjct: 115 VNSRADVNLVGERKRRSGPPDRHTPPDRNGPPDRHGP----PDRHGMDHGRGRGRGRD 168
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/85 (29%), Positives = 41/85 (48%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
L + R +V + + +G + + + R YGFV D D DA+ +LNG + G+ + V+
Sbjct: 696 LPRDVRESDVEKFLRGYGKIRDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVE 755
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGG 257
S R + G + R GR G
Sbjct: 756 FSKGRRSEGGGRDRRDFSGRGGRDG 780
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++ ++F+++G VV+ I+R+ F+ +A+ +N + G+ +K
Sbjct: 25 DLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAVNKKQMFGRTIKCT 84
Query: 183 LSTSRVR-----QRPGMGDPEQCYRCGRGGHWSKECPKALGPDR 299
++ R +R D +CY CG GGH S ECPK + +R
Sbjct: 85 IAKDNGRAPEFIRRRDYPDKSRCYECGEGGHLSYECPKNMLGER 128
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVR- 203
+VR F+ +G + + ++ NYGFV + D +DA+ E NG + G+ + V+ S R
Sbjct: 18 DVRRFFRSYGRLRDINLKNNYGFVEFEDDRDADDAVYECNGKEMLGERILVEHSRGGARS 77
Query: 204 --QRPGMG 221
RP G
Sbjct: 78 SSSRPSRG 85
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGH 260
R + FV + ++ DAI EL+G DG+ MKV + SR ++ G G YR G GG
Sbjct: 270 RGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQRGGGRGGG---YRSGGGGG 326
Query: 261 W--SKECPKALGPDRNGFRDRAFG 326
+ + + G R G R +G
Sbjct: 327 YGGGRGGGRGYGGGRGGGGRRDYG 350
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/60 (36%), Positives = 34/60 (56%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGH 260
R +GFV + +++ AI + +G +DG+PMKV + R +R G G YR G GG+
Sbjct: 50 RGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR-GERGGGGSQGGGYRSGGGGY 108
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGH 260
R +GFV + ++ AI E +G DG+PMKV + R + G G YR G GG+
Sbjct: 45 RGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGERGAG-GSRAGGYRSGGGGY 103
>SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
L+ + ++ +F +G ++ CD+ YGF+ + D +A++ N + G + V+
Sbjct: 13 LSKETKLRDLENVFYLYGKLLRCDLKTAYGFIEYEDPRDAEEAMRRENNRKLFGSRIVVE 72
Query: 183 LSTSRVRQRP--GMGDP----EQCYRCGRGG 257
S R +P G P ++C CG+ G
Sbjct: 73 YVRSGERGKPVGGQTRPTVVGDECLVCGKLG 103
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/60 (36%), Positives = 31/60 (51%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGH 260
R +GFV + ++ AI E +G +DG+PMKV + R G G YR G GG+
Sbjct: 137 RGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPR-GDSGGGGSQGGGYRSGGGGY 195
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCG-RGG 257
R +GFV D A+K LNG V G+ +K+ S SR R G G YR G RGG
Sbjct: 99 RGFGFVTFANPEDAQTAVKSLNGKEVQGRTLKIAPSISRGRDGGG-GGYRGGYRGGYRGG 157
Query: 258 H 260
+
Sbjct: 158 Y 158
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
+++++F G V C ++R+ Y FV+ D D N A++E+NG + + +KV
Sbjct: 42 DIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVS 101
Query: 183 LS 188
+
Sbjct: 102 FA 103
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVD 161
L + + EV LF+ FG ++ ++ R GFV D + AI +LN +
Sbjct: 120 LPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDLNNKTLP 179
Query: 162 GQPMKV 179
G +K+
Sbjct: 180 GTNVKL 185
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+++ +F K+G + + +R+YGFV+ AI +NG +DG ++V L+
Sbjct: 17 QLKAVFTKYGQIEKVRKIRDYGFVYFAKRESAVQAIDGINGAYIDGCKLEVSLA 70
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++ + FQ FGTV+ + + +GFV D +AI+ +NG + + +KVQ
Sbjct: 292 DLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQ 351
Query: 183 LSTSRVRQRP 212
L + RP
Sbjct: 352 LKRPKDANRP 361
>SB_16234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 37.5 bits (83), Expect = 0.008
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKALGPDRN 302
CY CG GH+++ECPK L P N
Sbjct: 627 CYDCGEEGHFARECPKRLPPTSN 649
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 8/67 (11%)
Frame = +3
Query: 36 ELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLST 191
+ FQ FGTV+ + + +GFV D +AI+ +NG + + +KVQL
Sbjct: 280 QTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKR 339
Query: 192 SRVRQRP 212
+ RP
Sbjct: 340 PKDANRP 346
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 36.3 bits (80), Expect = 0.019
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 213 GMGDPEQCYRCGRGGHWSKECP 278
G G + C++CG GH+S+ECP
Sbjct: 398 GRGQSDTCHKCGETGHYSRECP 419
Score = 31.1 bits (67), Expect = 0.72
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKALG 290
C++CG GH+++ECP G
Sbjct: 382 CHKCGEVGHFARECPTGRG 400
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 35.9 bits (79), Expect = 0.025
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKALGPDR 299
CY+CG+ GH+++ECP A G R
Sbjct: 202 CYKCGKYGHFARECPDAGGSGR 223
>SB_10203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1091
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 165 QPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECP 278
QP Q +S +QRP C CG GHW ++CP
Sbjct: 1029 QPSYQQYGSSFGQQRPNEQQRGSCRCCGAPGHWWRDCP 1066
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 34.3 bits (75), Expect = 0.077
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
L+ + +++E + ++G V +++Y FVH AI+E +G +DG ++
Sbjct: 336 LSPSITEEKLKEEYSQYGAVDRVKKLKDYAFVHFTERDHALKAIEETDGKEMDGLKIEAS 395
Query: 183 L------STSRVRQRPGMGDPEQCYRCGRGG 257
L + R R + G G R GRGG
Sbjct: 396 LAKPQPGNKDRQRGQSGFGSLNS-RRGGRGG 425
>SB_20121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2306
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 180 QLSTSRVRQRPGMGDPEQCYRCGRGGHWSK--ECPKALG 290
++++ R RQ G + CYRCG GH+SK EC KA G
Sbjct: 1510 KVNSLRGRQEKEKGKGKHCYRCGMEGHFSKDPEC-KARG 1547
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 78 VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 185
+ +GFV + + N A ++LNG +VDG+ ++V L
Sbjct: 123 IEGFGFVTFNTAAEANKAREKLNGTIVDGRKVEVSL 158
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 33.5 bits (73), Expect = 0.13
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +3
Query: 213 GMGDPEQCYRCGRGGHWSKEC 275
G G C++CG+ GHW+K C
Sbjct: 440 GGGQAGTCFKCGQEGHWAKNC 460
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 18 RAPEVRELFQKFGT--VVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQ 167
R +V++ F +G + E + YGFV D + D DA+ E NG + G+
Sbjct: 15 REDDVKKFFYTYGRFKIREIILKDGYGFVEFDYSDDAEDAVYECNGKKMLGE 66
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
+++ +F+ FG VV C + + YGF+ + NDAI +N + GQ ++V
Sbjct: 214 DIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRV 272
>SB_49583| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 163
Score = 33.1 bits (72), Expect = 0.18
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 228 EQCYRCGRGGHWSKEC 275
E CYRCG+ GH++++C
Sbjct: 121 ESCYRCGKSGHFARDC 136
Score = 31.1 bits (67), Expect = 0.72
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPK 281
D +CY+CG GH ++CP+
Sbjct: 138 DDTKCYKCGNTGHIRRDCPE 157
Score = 30.7 bits (66), Expect = 0.95
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKALGPDR 299
CY+CG+ H + CP A G D+
Sbjct: 4 CYQCGKTDHLASNCPDADGDDK 25
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDR 317
D CY CG+ GH S++C P G R+R
Sbjct: 24 DKPVCYSCGKKGHISRDCK---NPSSGGSRNR 52
Score = 29.1 bits (62), Expect = 2.9
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 234 CYRCGRGGHWSKECP 278
CYRC GH++++CP
Sbjct: 78 CYRCQETGHFARDCP 92
Score = 27.5 bits (58), Expect = 8.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 234 CYRCGRGGHWSKEC 275
CYRC GH++++C
Sbjct: 56 CYRCNMSGHFARDC 69
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 185
V+ +F+ FGTV ++ + YGFV A++++NG + G+P+K+
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIGP 317
Query: 186 STSR 197
T R
Sbjct: 318 VTER 321
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 32.7 bits (71), Expect = 0.24
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVR---QRPGMGDPEQCYRCGR 251
R +GFV D + E+ G VDG+ +++ ++ R + G G +R GR
Sbjct: 327 RGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRTEGGGRGGGRGGGRGGFRGGR 386
Query: 252 GG 257
GG
Sbjct: 387 GG 388
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 32.7 bits (71), Expect = 0.24
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Frame = +3
Query: 33 RELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
R +F+ ++ C IVR+ +GFV + T D AI +LNG + + +KV S
Sbjct: 64 RMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNGFTIGNKVLKVAFS 123
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3
Query: 18 RAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQ 167
R ++ + + +G V E + YGFV D D +D + +LNG + G+
Sbjct: 17 RERDLEKFVRGYGRVREISMKLGYGFVEFDDYRDADDCVYDLNGRNLLGE 66
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 32.7 bits (71), Expect = 0.24
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
Frame = +3
Query: 39 LFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+F +FGT++ C+++R+ Y F+ + D A +++ +++D + + V S S
Sbjct: 139 IFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKMDNVLIDDRRIHVDFSQS 198
>SB_34761| Best HMM Match : zf-CCHC (HMM E-Value=4.9e-08)
Length = 59
Score = 32.7 bits (71), Expect = 0.24
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 216 MGDPEQCYRCGRGGHWSKECPKA 284
M + CY+CG+ GH++++C +A
Sbjct: 4 MSSSKDCYKCGKTGHFARDCTEA 26
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 32.3 bits (70), Expect = 0.31
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Frame = +3
Query: 12 NXRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVD 161
N +++ F ++GT+V+C I+ R +GFV +++ VN+ +K+ + ++ D
Sbjct: 60 NTTEEGLKDYFSQWGTIVDCVIMKRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDD 115
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 32.3 bits (70), Expect = 0.31
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELNGMMVD 161
L D +RE F +GT+ ++++ +GFV + + A+ E+NG ++
Sbjct: 219 LDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILI 278
Query: 162 GQPMKVQLSTSRVRQR 209
+P+ V L+ R ++
Sbjct: 279 SKPLYVALAQRREERK 294
>SB_31048| Best HMM Match : zf-CCHC (HMM E-Value=5.5e-05)
Length = 601
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 GMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWS--KECPKALGPDRN 302
G VD P++ Q S V+ +CYRCGR GH S K C KALG N
Sbjct: 98 GGKVDTPPIEQQSGISNVKSEV------ECYRCGRKGHRSSDKVC-KALGKKCN 144
>SB_23070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 31.9 bits (69), Expect = 0.41
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 GMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWS--KECPKALGPDRN 302
G VD P++ Q S V+ +CYRCGR GH S K C KALG N
Sbjct: 456 GGKVDTPPIEQQSGISNVKSEV------ECYRCGRKGHRSSDKVC-KALGKKCN 502
>SB_9365| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 30 VRELFQKFGTVV------ECDIVRNYGFVHLDATGDVNDAIKELNGMMVD 161
+R++F KFG +V E D+ R Y F+ D A+K NG +D
Sbjct: 94 IRKVFSKFGQIVTEHYPMEKDLTRGYIFLEFSNASDAVRAVKTANGYKLD 143
>SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 31.9 bits (69), Expect = 0.41
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 228 EQCYRCGRGGHWSKEC 275
+ C+RCG GHW+++C
Sbjct: 678 DTCFRCGEEGHWAEDC 693
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 31.9 bits (69), Expect = 0.41
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 213 GMGDPEQCYRCGRGGHWSKECPKA 284
G G C++C GH+++ECP A
Sbjct: 459 GGGGSRTCHKCNEEGHFARECPNA 482
Score = 31.5 bits (68), Expect = 0.54
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKA 284
CY+C GH+++ECP A
Sbjct: 521 CYKCNETGHFARECPNA 537
Score = 31.5 bits (68), Expect = 0.54
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKA 284
CY+C GH+++ECP A
Sbjct: 603 CYKCNETGHFARECPNA 619
Score = 31.1 bits (67), Expect = 0.72
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +3
Query: 213 GMGDPEQCYRCGRGGHWSKECPKALGPDRNG 305
G C++C + GH+++ECP NG
Sbjct: 548 GGSSDSTCFKCQQTGHFARECPNESAAGENG 578
Score = 30.7 bits (66), Expect = 0.95
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +3
Query: 231 QCYRCGRGGHWSKECPKALG 290
+C++C GH+++ECP + G
Sbjct: 488 KCFKCNESGHFARECPNSGG 507
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 213 GMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDR 317
G C++C + GH+++ECP +G R +
Sbjct: 630 GGSSDSTCFKCQQTGHFARECPNESAAGEDGDRPK 664
>SB_23747| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 31.9 bits (69), Expect = 0.41
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 180 QLSTSRVRQRPGMGDPE---QCYRCGRGGHWS--KECPKALGPDRN 302
++ T V Q+ G+ + + +CYRCGR GH S K C KALG N
Sbjct: 178 KVDTPPVEQQSGISNVKSEVECYRCGRKGHRSSDKVC-KALGKKCN 222
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 31.5 bits (68), Expect = 0.54
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 234 CYRCGRGGHWSKECP 278
C+ CG GHW++ CP
Sbjct: 536 CFHCGMRGHWARSCP 550
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 31.5 bits (68), Expect = 0.54
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKA 284
CY+C GH+++ECP A
Sbjct: 26 CYKCNETGHFARECPNA 42
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 213 GMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDR 317
G C++C + GH+++ECP +G R +
Sbjct: 53 GGSSDSTCFKCQQTGHFARECPNESAAGEDGDRPK 87
>SB_35115| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06)
Length = 196
Score = 31.1 bits (67), Expect = 0.72
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 120 VNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKEC 275
+ + +++ ++ D Q L+ +RV++R CY CGR GH S+ C
Sbjct: 107 LTEGLQKQQQVLADTQASLATLA-NRVQRREARWSDLTCYTCGRVGHISRFC 157
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLST 191
E++E+F+K+G V E I + +GF+ LD A L+ G+ ++V+ +T
Sbjct: 67 EMKEMFKKYGEVAEVFINKEKGFGFIRLDTRLHAEAAKAGLDMATRKGRTLRVRFAT 123
>SB_2337| Best HMM Match : zf-CCHC (HMM E-Value=0.0064)
Length = 422
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 219 GDPEQCYRCGRGGHWSKECPK 281
G P+ C RC GH KEC K
Sbjct: 198 GQPQSCLRCSEIGHGVKECTK 218
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 222 DPEQCYRCG--RGGHWSKECP 278
DPE C+ CG RG H KECP
Sbjct: 136 DPETCFGCGDRRGPHPWKECP 156
>SB_27878| Best HMM Match : zf-CCHC (HMM E-Value=0.00046)
Length = 338
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC R GH + +C
Sbjct: 73 RVQQKPDSAGPKFDGRCHRCNRQGHKAADC 102
>SB_18880| Best HMM Match : zf-CCHC (HMM E-Value=0.00013)
Length = 388
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +3
Query: 180 QLSTSRVRQRPGMGDPE---QCYRCGRGGHWS--KECPKALGPDRN 302
++ T + Q+ G+ + + +CYRCGR GH S K C KALG N
Sbjct: 176 KVETPPIEQQSGIFNVKSEVECYRCGRKGHRSSDKVC-KALGKKCN 220
>SB_51823| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 382
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Frame = +3
Query: 168 PMKVQLSTSRVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
P + ++ RV+Q+P P+ +C+RC + GH + +C
Sbjct: 207 PDQAGVNQLRVQQKPDSAGPKFDGRCHRCNKQGHKAADC 245
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMM 155
++R L+Q + V +CDI+ + + TGD +DA+K + GM+
Sbjct: 436 QLRALYQAYQHVAKCDILET---IDDELTGDYHDAVKAI-GML 474
>SB_25619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1038
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWS--KECPKALGPDRN 302
+CYRCGR GH S K C KALG N
Sbjct: 284 ECYRCGRKGHRSSDKVC-KALGKKCN 308
>SB_23039| Best HMM Match : rve (HMM E-Value=2.8e-20)
Length = 984
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWS--KECPKALGPDRN 302
+CYRCGR GH S K C KALG N
Sbjct: 542 ECYRCGRKGHRSSDKVC-KALGKKCN 566
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 312 RGNRCGRGPAPSGTPWTSG-PRGHSGSTARG 223
RG+R RGP PSG P + G P GH G G
Sbjct: 327 RGDRGPRGP-PSGVPTSGGPPPGHQGLRPSG 356
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIVRN--YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVR 203
++E F G V + +N GFV D + AI E+NG+ V V + S R
Sbjct: 124 LKEEFNHLGHVERVNFEKNRSQGFVTFDTWEAADKAIDEMNGLKV----QHVHIRVSMAR 179
Query: 204 QRPGMGD 224
++P M +
Sbjct: 180 RQPNMDE 186
>SB_52753| Best HMM Match : zf-CCHC (HMM E-Value=7.6e-06)
Length = 357
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 120 VNDAIKELNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKEC 275
+ + ++ ++ D Q L+ +RV+ R CY CGR GH S+ C
Sbjct: 268 LTEGLQRQQQVLADTQASLATLA-NRVQGREARWSDLTCYTCGRVGHISRFC 318
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = +3
Query: 36 ELFQKFGTVVECDIVRNYG-------FVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
EL +K+G + E ++ N G +V D A+ +LN +GQP+ +LS
Sbjct: 90 ELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVNDLNNRWYNGQPIYAELS 147
>SB_59232| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 219
>SB_58675| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 2353
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 110 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 139
>SB_56107| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 508
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 119 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 148
>SB_52251| Best HMM Match : rve (HMM E-Value=1.1e-34)
Length = 863
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 182 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 211
>SB_44270| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 1007 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 1036
>SB_42176| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 612
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 219
>SB_40370| Best HMM Match : rve (HMM E-Value=1.3e-37)
Length = 1393
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 247 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 276
>SB_34077| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 403
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 110 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 139
>SB_21117| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 438
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 170 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 199
>SB_15656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1107
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 40 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 69
>SB_52054| Best HMM Match : zf-CCHC (HMM E-Value=6.6e-05)
Length = 437
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 195 RVRQRPGMGDPEQCYRCGRGGHWSKE 272
R R+ G + C RCG GH+SKE
Sbjct: 174 RGREEKEKGKGKHCNRCGMEGHFSKE 199
>SB_39547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 219
>SB_34655| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 297
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 219
>SB_29559| Best HMM Match : zf-CCHC (HMM E-Value=0.0015)
Length = 858
Score = 29.1 bits (62), Expect = 2.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 219 GDPEQCYRCGRGGHWSKECPK 281
G P C RC + GH+ K+C +
Sbjct: 226 GQPPSCVRCSQIGHYVKDCTR 246
>SB_28775| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 295
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 188 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 217
>SB_13663| Best HMM Match : zf-CCHC (HMM E-Value=0.00023)
Length = 356
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 219
>SB_10363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 70 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 99
>SB_9047| Best HMM Match : RVT_1 (HMM E-Value=3.4e-19)
Length = 1116
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 148 RVQQKPDSAGPKFHGRCHRCNKQGHKAADC 177
>SB_4255| Best HMM Match : rve (HMM E-Value=1.4e-38)
Length = 899
Score = 29.1 bits (62), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSAGPKFDGRCHRCNKQGHKAADC 219
>SB_44609| Best HMM Match : zf-CCHC (HMM E-Value=1.6e-24)
Length = 283
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC---PKALGPDRNGFRD 314
+C+ CG GH S C PK L P+ G ++
Sbjct: 194 KCFICGETGHLSSSCPDNPKGLYPEGGGCKE 224
>SB_58404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 532
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 309 GNRCGRGPAPSGTPWTSGPRG-HSGSTA 229
G G+ APSG+ W P G H+GS A
Sbjct: 389 GEAGGQAQAPSGSEWAEQPNGDHNGSHA 416
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+ YGFV D + AIK +N + V G+P++V +++
Sbjct: 54 QGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASA 91
>SB_5738| Best HMM Match : zf-CCHC (HMM E-Value=0.37)
Length = 700
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 147 GMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGH 260
G VD P++ Q S V+ +CYRCGR GH
Sbjct: 451 GGKVDTPPIEQQSGISNVKSEV------ECYRCGRKGH 482
>SB_19135| Best HMM Match : Ribosomal_L13e (HMM E-Value=0)
Length = 600
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 156 VDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 281
+D + ++ R Q P GD CY CG GH + C K
Sbjct: 345 LDSDVGQALIARGRRAQEP-CGDRPTCYNCGERGHVAIGCRK 385
>SB_58082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 27.9 bits (59), Expect = 6.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3
Query: 234 CYRCGRGGHWSKEC 275
C CG+GGH++K C
Sbjct: 199 CNNCGKGGHYAKVC 212
>SB_50978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC--PKALGPDRNG 305
+C CG+ HW+K C K GP G
Sbjct: 246 KCSNCGKPNHWAKVCRSTKPQGPTPRG 272
>SB_49427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1958
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 156 VDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKEC 275
+D + ++ R Q P GD CY CG GH + C
Sbjct: 88 LDSDVGRAPIARGRRDQEPS-GDRPTCYNCGERGHVAIGC 126
>SB_38746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC--PKALGPDRNG 305
+C CG+ HW+K C K GP G
Sbjct: 72 KCSNCGKPNHWAKVCRSTKPQGPTPRG 98
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 420 SRFDSPRDLFERRYPVGGASRGLELGGSXGARGDFV 527
++FD + F ++YP+G G+ G G G V
Sbjct: 570 NKFDQQKAYFSQQYPMGSDPNGMAARGFGGLPGSMV 605
>SB_47507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 210 PGMGDPEQCYRCGRGGHWSKECPKALGPDR 299
PG QC C G + ++ECP + G R
Sbjct: 386 PGCRYTHQCAYCENGNYPARECPSSAGRKR 415
>SB_45492| Best HMM Match : zf-CCHC (HMM E-Value=2.9)
Length = 77
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 180 QLSTSRVRQRPGMGDPEQCYRCGRGGHWSKE 272
++++ R R+ G + CYRCG G++ K+
Sbjct: 42 KVNSLRGREEKEKGKGKHCYRCGMEGYFRKD 72
>SB_15198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +3
Query: 195 RVRQRPGMGDPE---QCYRCGRGGHWSKEC 275
RV+Q+P P+ +C+RC + GH + +C
Sbjct: 190 RVQQKPDSVGPKFDGRCHRCNKQGHKAADC 219
>SB_11912| Best HMM Match : RVT_1 (HMM E-Value=2.6e-26)
Length = 1329
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC--PKALGPDRNG 305
+C CG+ HW+K C K GP G
Sbjct: 233 KCSNCGKPNHWAKVCRSTKPQGPTPRG 259
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -1
Query: 312 RGNRCGRG-PAPSGTPWTSGPRGHSG 238
RG++ RG P PSG P G RG G
Sbjct: 1420 RGDKGDRGLPGPSGPPGEEGARGSDG 1445
>SB_54349| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 971
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 147 GMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWS--KECPKALGPDRN 302
G VD P++ Q S V+ +CYRCG GH S K C K LG N
Sbjct: 176 GGKVDTPPIEQQSGISNVKSEV------ECYRCGGKGHRSSDKVC-KVLGKKCN 222
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/52 (32%), Positives = 20/52 (38%), Gaps = 5/52 (9%)
Frame = -1
Query: 315 DRGNRCGRGP----APSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTAP 175
DRG +GP G P T GPRG G G P+ + T P
Sbjct: 128 DRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNGANGTAGP 179
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 27.5 bits (58), Expect = 8.8
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Frame = -1
Query: 309 GNRCGRG-PAPSGTPWTSGPRGHSGSTARG----RPCPAAAGHDSSTTAP 175
GN+ RG P P G GP G S TA G P AAG S AP
Sbjct: 43 GNQGMRGDPGPQGDQGPQGPPGGSTQTAGGIKGPDPNDLAAGIKGSNGAP 92
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 200 PAAAGHGRPRAVLPLWPRGPL 262
P A GHGRPR +P GP+
Sbjct: 997 PMAFGHGRPRGDVPAHHGGPI 1017
>SB_759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 149 YDGRRTAHEGAVVDESCPAAAGHGRPRAVLPLWP 250
YD + T+ D+SCP A+ R R L+P
Sbjct: 814 YDNQSTSTNKVDEDDSCPEASAPSRTRHTCELYP 847
>SB_58621| Best HMM Match : RVT_1 (HMM E-Value=1.5e-25)
Length = 1238
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC--PKALGPDRNG 305
+C CG+ HW+K C K GP G
Sbjct: 233 KCSNCGKPNHWAKVCRSTKPQGPAPRG 259
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = -3
Query: 292 GPSAFGHSLDQWPPRPQR*HCSG-SPMPGRCRTRLVDNCTFMGCPSTIIPFNSLIASFTS 116
G + + S++ P RP H G S P + + M +PF + I SFT
Sbjct: 2362 GMNTYQSSINMVPVRPSPPHVDGFSQSPPMSTLNMSNRPVSMSPVDPNLPFTTAIGSFTK 2421
Query: 115 P 113
P
Sbjct: 2422 P 2422
>SB_37473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC--PKALGPDRNG 305
+C CG+ HW+K C K GP G
Sbjct: 164 KCSNCGKPNHWAKVCRSTKPPGPTPRG 190
>SB_34021| Best HMM Match : Zip (HMM E-Value=0)
Length = 808
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 511 LAVTSFLRPYAANPCHPCLIYLHCG 585
LA TS + P A PCHP +Y G
Sbjct: 159 LAHTSGIFPIALTPCHPLDVYCDLG 183
>SB_14097| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 431
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 511 LAVTSFLRPYAANPCHPCLIYLHCG 585
LA TS + P A PCHP +Y G
Sbjct: 227 LAHTSGIFPIALTPCHPLDVYCDLG 251
>SB_10860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1292
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +3
Query: 174 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKEC 275
+ ++ R Q P GD CY CG GH + C
Sbjct: 218 RAPIARGRRAQEPS-GDRPTCYNCGERGHVAIGC 250
>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
Length = 682
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 200 PAAAGHGRPRAVLPLWPRGPL 262
P A GHGRPR +P GP+
Sbjct: 130 PMAFGHGRPRGDVPAHHGGPI 150
>SB_4030| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 809
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 36 ELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIK 137
E+F +G + C ++++YGFV + + ND ++
Sbjct: 745 EVFNTYGQLANCHLLQSYGFV--EGPDNPNDTVE 776
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,215,341
Number of Sequences: 59808
Number of extensions: 328549
Number of successful extensions: 1715
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1701
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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