Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_L10
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 84 6e-17
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 84 6e-17
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 2e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 2e-06
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 47 9e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 3e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 3e-05
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 43 2e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 43 2e-04
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 40 0.001
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 0.002
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 0.002
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 39 0.002
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 39 0.003
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 38 0.006
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 37 0.013
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 36 0.017
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 36 0.017
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.017
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.022
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.022
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 36 0.029
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.039
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 35 0.039
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 35 0.051
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 35 0.051
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 35 0.051
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 35 0.051
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 35 0.051
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.068
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.21
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.21
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 32 0.27
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 32 0.27
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.27
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.36
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.36
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.36
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.36
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.36
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.36
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.36
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 32 0.36
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 31 0.48
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 31 0.48
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.48
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 31 0.48
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 31 0.48
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 31 0.48
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 31 0.48
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 31 0.63
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 31 0.63
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 0.63
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 31 0.63
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 30 1.1
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 30 1.1
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 30 1.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 1.1
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 30 1.5
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 30 1.5
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 30 1.5
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 30 1.5
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 30 1.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 1.9
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 1.9
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 29 1.9
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 29 1.9
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 29 1.9
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 29 1.9
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 1.9
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 1.9
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 29 2.6
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 29 2.6
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 29 2.6
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 2.6
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 29 3.4
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 3.4
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 29 3.4
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 4.5
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 4.5
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 28 4.5
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 28 4.5
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 4.5
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 4.5
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 4.5
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 4.5
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 5.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 28 5.9
U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter... 28 5.9
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 28 5.9
U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protei... 28 5.9
M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein ( C.ele... 28 5.9
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 28 5.9
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 28 5.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 5.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 5.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 5.9
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 28 5.9
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 28 5.9
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 27 7.8
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 27 7.8
U55857-11|AAA98036.1| 153|Caenorhabditis elegans Hypothetical p... 27 7.8
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 27 7.8
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 27 7.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 27 7.8
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 27 7.8
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 27 7.8
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 27 7.8
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 27 7.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 27 7.8
M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein. 27 7.8
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 27 7.8
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 27 7.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 27 7.8
AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical ... 27 7.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 27 7.8
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 27 7.8
AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen prot... 27 7.8
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 27 7.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 27 7.8
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 84.2 bits (199), Expect = 6e-17
Identities = 38/93 (40%), Positives = 60/93 (64%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
L DN + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +DG+ + ++
Sbjct: 10 LPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTIDGKVVNIK 68
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 281
STS++R PGM P +C+RC H + +CP+
Sbjct: 69 KSTSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 84.2 bits (199), Expect = 6e-17
Identities = 38/93 (40%), Positives = 60/93 (64%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
L DN + +++++FQ F V ECDIV+NY FVH++ DV+ I L G +DG+ + ++
Sbjct: 10 LPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTIDGKVVNIK 68
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 281
STS++R PGM P +C+RC H + +CP+
Sbjct: 69 KSTSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = +3
Query: 18 RAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
R P+++ +F+KFG V + +I+ N +GFV ++ D A +EL+G M++G+ ++V
Sbjct: 165 RDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
Query: 180 QLSTSRVRQR 209
+T+RV +
Sbjct: 225 NCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = +3
Query: 18 RAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
R P+++ +F+KFG V + +I+ N +GFV ++ D A +EL+G M++G+ ++V
Sbjct: 165 RDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
Query: 180 QLSTSRVRQR 209
+T+RV +
Sbjct: 225 NCATARVHSK 234
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 47.2 bits (107), Expect = 9e-06
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMMVDGQPM 173
L + + E+ E+F +FG + + + R + FV D D DA++ L+G + G
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRA 69
Query: 174 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRD 332
+V+LST + R G G GRGG P R+ R R GRD
Sbjct: 70 RVELSTGQRRGGGGRGGGFG----GRGGGGRDRSPYRGDRGRSRSRSRDRGRD 118
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Frame = +3
Query: 18 RAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
R P++ +F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V
Sbjct: 112 REPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 171
Query: 180 QLSTSRVRQR 209
L+T RV +
Sbjct: 172 NLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 6/70 (8%)
Frame = +3
Query: 18 RAPEVRELFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
R P++ +F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V
Sbjct: 112 REPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 171
Query: 180 QLSTSRVRQR 209
L+T RV +
Sbjct: 172 NLATQRVHNK 181
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMMVDGQPM 173
L + + E+ E+F +FG + + + R + FV D D DA++ L+G + G
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRA 69
Query: 174 KVQLSTSRVRQRPGMG 221
+V+LST + R G G
Sbjct: 70 RVELSTGQRRGGGGRG 85
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRN---YGFVHLDATGDVNDAIKELNGMMVDGQPM 173
L + + E+ E+F +FG + + + R + FV D D DA++ L+G + G
Sbjct: 10 LPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRA 69
Query: 174 KVQLSTSRVRQRPGMG 221
+V+LST + R G G
Sbjct: 70 RVELSTGQRRGGGGRG 85
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = +3
Query: 39 LFQKFGTVVECDIVRN------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV 200
+F+K G VV+ +I+ N +GFV + D + A E NG ++G+ ++V L+T RV
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 201 RQR 209
+
Sbjct: 61 HNK 63
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
LT ++ F+ +G + + + +GFV D D DA+ +LNG + G+ + +
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILD 69
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGG 257
S + R G GD GRGG
Sbjct: 70 YS----KPRGGGGDRGGFGGGGRGG 90
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
LT ++ F+ +G + + + +GFV D D DA+ +LNG + G+ + +
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILD 69
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGG 257
S + R G GD GRGG
Sbjct: 70 YS----KPRGGGGDRGGFGGGGRGG 90
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
LT ++ F+ +G + + + +GFV D D DA+ +LNG + G+ + +
Sbjct: 10 LTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILD 69
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGG 257
S + R G GD GRGG
Sbjct: 70 YS----KPRGGGGDRGGFGGGGRGG 90
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+ + F FG ++ C + + YGFVH + +AI+++NGM++ G+ + V
Sbjct: 136 IYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 195
Query: 189 TSRVRQRPGMGDPEQ----CYRCGRGGHWSKE 272
R ++ +G+ + Y G H++KE
Sbjct: 196 QPRAQRNRELGETAKQFTNVYVKNFGDHYNKE 227
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +3
Query: 9 DNXRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQP 170
D+ + ++F KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 222 DHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 281
Query: 171 MKVQL 185
+K+ +
Sbjct: 282 LKLHV 286
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/67 (19%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+++ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V +
Sbjct: 333 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIG 392
Query: 189 TSRVRQR 209
+ +R
Sbjct: 393 QRKEDRR 399
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+ + F FG ++ C + + YGFVH + +AI+++NGM++ G+ + V
Sbjct: 73 IYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 132
Query: 189 TSRVRQRPGMGDPEQ----CYRCGRGGHWSKE 272
R ++ +G+ + Y G H++KE
Sbjct: 133 QPRAQRNRELGETAKQFTNVYVKNFGDHYNKE 164
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +3
Query: 9 DNXRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQP 170
D+ + +LF KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 159 DHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 218
Query: 171 MKVQL 185
+K+ +
Sbjct: 219 LKLHV 223
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+++ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 270 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 329
Query: 189 TSRVRQR 209
+ +R
Sbjct: 330 QRKEDRR 336
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+ + F FG ++ C + + YGFVH + +AI+++NGM++ G+ + V
Sbjct: 136 IYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 195
Query: 189 TSRVRQRPGMGDPEQ----CYRCGRGGHWSKE 272
R ++ +G+ + Y G H++KE
Sbjct: 196 QPRAQRNRELGETAKQFTNVYVKNFGDHYNKE 227
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +3
Query: 9 DNXRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQP 170
D+ + +LF KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 222 DHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 281
Query: 171 MKVQL 185
+K+ +
Sbjct: 282 LKLHV 286
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+++ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 333 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 392
Query: 189 TSRVRQR 209
+ +R
Sbjct: 393 QRKEDRR 399
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 39.1 bits (87), Expect = 0.002
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGMMVDGQP 170
L + R EV ++F K+G + DI G FV + D DA++ +G DG+
Sbjct: 16 LPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRR 75
Query: 171 MKVQLSTSRVRQRPGMGDPEQCYRCGRGGHW--SKECPKALGPD-RNGFR 311
++V+ + + PG G P Q RGG + + + GP R G+R
Sbjct: 76 IRVEFTRGVGPRGPG-GRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYR 124
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.7 bits (86), Expect = 0.003
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIVRNYG----FVHLDATGDVNDAIKELNGMMVDGQP 170
L + R EV ++F K+G + DI G FV + D DA++ +G DG+
Sbjct: 16 LPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRR 75
Query: 171 MKVQLSTSRVRQRPGMGDPEQCYRCGRGGHW--SKECPKALGPD-RNGFR 311
++V+ T V R G P Q RGG + + + GP R G+R
Sbjct: 76 IRVEF-TRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYR 124
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +3
Query: 204 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNG 305
QR G G CY CG GH+S++CP A +G
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSG 92
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 207 RPGMGDPEQCYRCGRGGHWSKECPK 281
R G G CY C GH+S++CPK
Sbjct: 28 RRGGGGGSTCYNCQETGHFSRDCPK 52
Score = 32.7 bits (71), Expect = 0.21
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 228 EQCYRCGRGGHWSKECPKA 284
++CY CGR GH S+EC ++
Sbjct: 107 QKCYNCGRSGHISRECTES 125
Score = 31.1 bits (67), Expect = 0.63
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 192 SRVRQRPGMGDPEQCYRCGRGGHWSKECP 278
SR G + ++CY+C GH S++CP
Sbjct: 119 SRECTESGSAEEKRCYQCQETGHISRDCP 147
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 234 CYRCGRGGHWSKECPKALGPDRNGFRDRAFGRDXXXXXXXXXFLRD 371
CY+C + GH S+ CP G G R G F RD
Sbjct: 6 CYKCQQPGHISRNCPN--GESDGGRRGGGGGSTCYNCQETGHFSRD 49
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.7 bits (81), Expect = 0.013
Identities = 26/85 (30%), Positives = 38/85 (44%), Gaps = 8/85 (9%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++RE F KFG V E I+R+ YGFV D AI E+NG + + ++
Sbjct: 147 KLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTN 206
Query: 183 LSTSRVRQRPGMGDPEQCYRCGRGG 257
+T + + G R G GG
Sbjct: 207 WATRKPDEDGERGGDRGDRRGGGGG 231
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
V + F FG ++ C + + YGFVH + AI+++NGM++ + + V
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKF 220
Query: 189 TSRVRQRPGMGD 224
R ++ +G+
Sbjct: 221 QPRAQRMKELGE 232
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 36.3 bits (80), Expect = 0.017
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
V + F FG ++ C + + YGFVH + AI+++NGM++ + + V
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKF 220
Query: 189 TSRVRQRPGMGD 224
R ++ +G+
Sbjct: 221 QPRAQRMKELGE 232
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = +3
Query: 36 ELFQKFGT----VVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL----ST 191
EL+Q FG VV+C + YGFV D + I E++G ++G+ + V +
Sbjct: 111 ELYQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTV 170
Query: 192 SRVRQRP 212
R R+RP
Sbjct: 171 GRKRKRP 177
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
L + + E++ELF G + EC + + + F+ LD A + ++G ++ G+ ++V
Sbjct: 123 LPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRV 182
Query: 180 QLS 188
+ +
Sbjct: 183 RFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/63 (23%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIV-RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
L + + E++ELF G + EC + + + F+ LD A + ++G ++ G+ ++V
Sbjct: 123 LPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRV 182
Query: 180 QLS 188
+ +
Sbjct: 183 RFA 185
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 207 RPGMGDPEQCYRCGRGGHWSKECPKALG-PDRNG 305
R G G P C+ C GH S+ CPK +G D +G
Sbjct: 161 RRGRGGPGHCFHCQEHGHISRMCPKKVGETDEHG 194
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.1 bits (77), Expect = 0.039
Identities = 14/54 (25%), Positives = 32/54 (59%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
++ ELF+++ ++ V++Y F+H + D A++E NG ++G ++ L+
Sbjct: 392 KLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLA 445
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.039
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTA 178
CG GP PSG P T G G+ GS G P A G +S T A
Sbjct: 138 CGVGPPGPSGAPGTDGNPGNDGSPGNPGTPGQDAVGDESPTAA 180
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/73 (26%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++R++F +FG + +CD+V R +GF++ + D A +L +DG ++V
Sbjct: 91 DLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVD 150
Query: 183 LSTSRVRQRPGMG 221
S ++ P G
Sbjct: 151 FSLTKRGHSPTPG 163
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 326
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.068
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 308
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 326
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.068
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 308
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.051
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Frame = +3
Query: 3 LTDNXRAPEVRELFQKFGTVVECDIV---------RNYGFVHLDATGDVNDAIKELNGMM 155
L+ N + E+F +G + D+ R YG+V D D +IK ++G
Sbjct: 140 LSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKHMDGGQ 199
Query: 156 VDGQPMKVQLSTSR 197
+DG + V+++ R
Sbjct: 200 IDGMAVHVEMTIGR 213
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.051
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 326
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.068
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 308
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.068
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPA 208
P P+G GP GH GS+ GRP PA
Sbjct: 223 PGPAGPRGAPGPAGHPGSSGGGRPGPA 249
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = -1
Query: 297 GRGPAPS-GTPWTSGPRGHSGSTAR----GRPCPAAAGHDSSTTAP 175
G G AP G P GPRG G++ R G+P A G+ AP
Sbjct: 178 GGGAAPRPGPPGPKGPRGAPGNSGRAGAPGQPGNDAHGYGGGVGAP 223
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV-- 200
+V F+ +G + + + +GFV D +DA+ +LNG + G+ + ++ +V
Sbjct: 17 DVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRKVGY 76
Query: 201 -RQRPGMG 221
+R G G
Sbjct: 77 NEERSGSG 84
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.16
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 179
EVR LF G + C +VR+ YGFV+ D A+ NG+ + + +KV
Sbjct: 57 EVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKV 115
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 7/60 (11%)
Frame = +3
Query: 36 ELFQKFGTVVECDIVRN-------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+LF +FG +V I+R+ Y FV + + +A+ LNG + G+ ++V +S
Sbjct: 392 QLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSS 451
Score = 28.3 bits (60), Expect = 4.5
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
E+ +F+ FG ++ I+ + GFV D + + AIK LNG + G ++
Sbjct: 143 ELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSGCSEQI- 201
Query: 183 LSTSRVRQRPGMGDPE 230
T + P +P+
Sbjct: 202 --TVKFANNPASNNPK 215
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 204 QRPGMGDPEQCYRCGRGGHWSKECP 278
+R M E C RC GHW ECP
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH SKEC K P
Sbjct: 569 PRGCHNCGEEGHISKECDKPKVP 591
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.21
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +3
Query: 204 QRPGMGDPEQCYRCGRGGHWSKECP 278
+R M E C RC GHW ECP
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 31.5 bits (68), Expect = 0.48
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH SKEC K P
Sbjct: 569 PRGCHNCGEEGHISKECDKPKVP 591
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 32.3 bits (70), Expect = 0.27
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Frame = +3
Query: 33 RELFQKFGTVVECDIVR-------NYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLST 191
++ F+ GTVV C+I R +GFV + + G+ N + + M+DG+ V++
Sbjct: 190 QKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSSVGEQNKVL-AIPQHMIDGRRCDVKVPD 248
Query: 192 SRVRQ-RPGM 218
R +Q RP +
Sbjct: 249 GRDKQGRPSI 258
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV--RNYGFVHLDATGDVNDAIKELNGM 152
++ ELF+ FG ++ + + +GFV + G +++ + LNGM
Sbjct: 99 DIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGM 142
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 32.3 bits (70), Expect = 0.27
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +3
Query: 201 RQRPGMGDPEQCYRCGRGGHWSKECPKAL 287
R+RP P QC+ CG GH S CPK +
Sbjct: 603 RERP----PPQCFTCGEMGHISTYCPKRI 627
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = +3
Query: 201 RQRPGM--GDPEQ---CYRCGRGGHWSKECPKAL 287
R++PG+ G P C RC + GHW K CP L
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCPMKL 175
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 175
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 291 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 175
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 175
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 175
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 291 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 175
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 175
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 326
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 326
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 175
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 291 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 175
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 175
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 175
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = -1
Query: 291 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 175
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 175
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.36
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 225 PEQCYRCGRGGHWSKECPKALGP 293
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 222 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 326
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = -1
Query: 312 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHD 193
+G CG G + +G P + GP G GS GRP P G D
Sbjct: 109 QGGCCGCGTSAAGPPGSPGPDGQEGS--NGRPGAPGTNGPD 147
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++RE FQ FG V + ++R+ YGFV + AI+++NG + + ++
Sbjct: 37 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 96
Query: 183 LSTSR 197
+T +
Sbjct: 97 WATRK 101
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 167
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 142 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++RE FQ FG V + ++R+ YGFV + AI+++NG + + ++
Sbjct: 47 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 106
Query: 183 LSTSR 197
+T +
Sbjct: 107 WATRK 111
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 167
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 152 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++RE FQ FG V + ++R+ YGFV + AI+++NG + + ++
Sbjct: 150 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 209
Query: 183 LSTSR 197
+T +
Sbjct: 210 WATRK 214
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 167
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 255 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++RE FQ FG V + ++R+ YGFV + AI+++NG + + ++
Sbjct: 118 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 177
Query: 183 LSTSR 197
+T +
Sbjct: 178 WATRK 182
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDI--VRNYGFVHLDATGDVNDAIKELNGMMVDGQ 167
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 223 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 31.5 bits (68), Expect = 0.48
Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +3
Query: 9 DNXRAPEVRELFQKFGTVVECDIV------RNYGFVHLDATGDVNDAIKELNGMMVDGQP 170
D+ + +LF KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 162 DHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 221
Query: 171 MKVQL 185
+K+ +
Sbjct: 222 LKLHV 226
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/67 (19%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+++ F+ +G + ++ + +GFV + + A+ E+N MV +P+ V ++
Sbjct: 273 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 332
Query: 189 TSRVRQR 209
+ +R
Sbjct: 333 QRKEDRR 339
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 31.5 bits (68), Expect = 0.48
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 174 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKA 284
+V + R G P CY+C GH SK+CP++
Sbjct: 293 QVDADDKKKDSRKGNYRPPYCYKCKVVGHVSKDCPQS 329
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 31.1 bits (67), Expect = 0.63
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Frame = +3
Query: 201 RQRPGM--GDPEQ---CYRCGRGGHWSKECP 278
R++PG+ G P C RC + GHW K CP
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCP 172
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
E+ ++F FG +V + + +GFV D AI +NG + + +KVQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 183 LSTSRVRQRP 212
L R RP
Sbjct: 504 LKRPRNESRP 513
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 31.1 bits (67), Expect = 0.63
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
E+ ++F FG +V + + +GFV D AI +NG + + +KVQ
Sbjct: 444 ELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQ 503
Query: 183 LSTSRVRQRP 212
L R RP
Sbjct: 504 LKRPRNESRP 513
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = -1
Query: 309 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
GN+ GP P G P +GP G +G+ G P P A G P
Sbjct: 176 GNKGPAGPPGPGGKPGPAGPPGENGN--NGEPQPGAPGEPGQPGQP 219
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 31.1 bits (67), Expect = 0.63
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Frame = -1
Query: 312 RGNRCGRG-PAPSGTPWTSGPRG-------HSGSTARGRP-CPAAAGHDSSTTAP 175
RG + RG P PSG P GP G GS G+P P A GH P
Sbjct: 202 RGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTP 256
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.7 bits (66), Expect = 0.84
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
P P G P GP G SG A G P + G D AP
Sbjct: 114 PCPQGPPGPPGPPGPSGD-AGGNGNPGSPGQDGQPGAP 150
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.84
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
P P G P GP G SG A G P + G D AP
Sbjct: 147 PCPQGPPGPPGPPGPSGD-AGGNGNPGSPGQDGQPGAP 183
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
R + F+ G A++++NG +G+P++V L+
Sbjct: 46 RGFAFIEFAEEGSAQRAVEQMNGAEFNGRPLRVNLA 81
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 297 GRG-PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 199
GRG P PSG P + GP G G G P AG
Sbjct: 202 GRGLPGPSGAPGSQGPPGAPGQPGSGN-APGPAG 234
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 187
G P P+G P +GP G G + P A G+D +
Sbjct: 227 GNAPGPAGPPGPAGPNGQPGHPGQDGQ-PGAPGNDGT 262
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 309 GNRCGRGPA-PSGTPWTSGPRGHSGSTAR-GRP-CPAAAG 199
G + PA P G P SG +GH G + G+P P AG
Sbjct: 85 GQQASNCPAGPPGPPGASGDKGHDGQPGQAGKPGQPGVAG 124
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV 200
++R+LF +G + E I + Y FV + AI E+NG + G +V+ S R
Sbjct: 252 DLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGN--QVRCSWGRT 309
Query: 201 RQRP 212
+ P
Sbjct: 310 QAVP 313
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -1
Query: 306 NRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
N+C GP P G+P + GP G G G+P GHDS P
Sbjct: 124 NKCHAGPPGPKGSPGSPGPNGVPG--VDGKP-----GHDSLDVTP 161
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++R F+++G + + I R+ +GFV D A+ +G +VDG+ ++V
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVT 93
Query: 183 LS 188
L+
Sbjct: 94 LA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 182
++R F+++G + + I R+ +GFV D A+ +G +VDG+ ++V
Sbjct: 34 DLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVT 93
Query: 183 LS 188
L+
Sbjct: 94 LA 95
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGSTARGRPCP 211
GP P+G P GP G GS +P P
Sbjct: 250 GPGPAGPPGPPGPPGQDGSGGAAQPGP 276
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +3
Query: 39 LFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+F +FG + C+IVR+ Y F+ D A +++ +++D + + V S S
Sbjct: 260 IFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 319
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +3
Query: 39 LFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+F +FG + C+IVR+ Y F+ D A +++ +++D + + V S S
Sbjct: 260 IFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +3
Query: 39 LFQKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+F +FG + C+IVR+ Y F+ D A +++ +++D + + V S S
Sbjct: 191 IFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHVDFSQS 250
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAPS 172
P+P G P SGP G +G+ A G P P +S+ P+
Sbjct: 183 PSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPA 222
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCP 211
P P G P T+GP G +G CP
Sbjct: 262 PGPDGNPGTAGPPGKAGGEGEKGICP 287
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAP 175
C GP P+G P GP G++G A G+P P AG + AP
Sbjct: 162 CPAGPPGPAGNPGPKGPSGNAG--ADGQPGAPGNAGAAGAPGAP 203
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 309 GNRCGRGPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSST 184
GN P P G P GP+G +G A GRP PA + T
Sbjct: 166 GNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGT 208
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 409 TMIVHGSILHGTCSSDAIQLEEHHEGWNWADL 504
T+ VHG I+H C+SDA + ++ +N +D+
Sbjct: 785 TVNVHGKIVHSACASDAARSLDNSSFFNDSDI 816
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 309 GNRCGRGPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSST 184
GN P P G P GP+G +G A GRP PA + T
Sbjct: 160 GNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGT 202
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSG-STARGRPCPAAAGHDSSTTAPSWAV 163
P+P G P GP+G G S A G P PA + P+ V
Sbjct: 139 PSPVGPPGPPGPKGPDGESGAPGEPGPAGRPGNKGAPGPAGPV 181
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -1
Query: 297 GRG-PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 199
GRG P PSG P GP G G G P AG
Sbjct: 202 GRGLPGPSGAPGPQGPPGAPGQPGSGN-APGPAG 234
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 187
G P P+G P +GP G G + P A G+D +
Sbjct: 227 GNAPGPAGPPGPAGPNGQPGHPGQDGQ-PGAPGNDGT 262
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 309 GNRCGRGPA-PSGTPWTSGPRGHSGSTAR-GRP-CPAAAG 199
G + PA P G P SG +GH G + G+P P AG
Sbjct: 85 GQQASNCPAGPPGPPGASGDKGHDGQPGQAGKPGQPGVAG 124
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 178
GP P+G P +GP G+ G + P G D +++A
Sbjct: 196 GPGPAGPPGPAGPPGNDGQPGQ----PGGPGQDGASSA 229
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = -1
Query: 291 GPAPSGTPWTSGPR---GHSGSTARGRPCP 211
GP P+G P +GP G SGS + G P P
Sbjct: 234 GPGPAGPPGPAGPAGPDGQSGSGSAGGPGP 263
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 87 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 197
+GFV + +AI +NG + + +KVQL R
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 414
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 87 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 197
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 87 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 197
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 87 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 197
+GFV + +AI +NG + + +KVQL R
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 507
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 87 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 197
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 231 QCYRCGRGGHWSKEC-PKALGPDRNGFRDRA 320
QC+ C GH ++ C KA R G+ D+A
Sbjct: 575 QCHYCKNVGHMARNCKKKAFAEKRKGYEDQA 605
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = -1
Query: 309 GNRCGRG-PAPSGTPWTSGPRGHSGST-ARGRP-CPAAAGHDSS 187
G G G P P G P SG GHSG+ G P P A G D++
Sbjct: 223 GRSGGAGTPGPQGPPGPSGQPGHSGNDGVPGTPGNPGAPGGDAA 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCP 211
P P G P T+GP G +G CP
Sbjct: 263 PGPDGNPGTAGPPGKAGGEGEKGICP 288
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 172
P P G P +GP G+ G A G P P +S+ P+
Sbjct: 187 PGPPGPPGPAGPAGNDG--AAGTPGPDGPAGESTYPEPA 223
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAG 199
GP P+G P +GP G G++ P AAG
Sbjct: 224 GPGPAGPPGPAGPPGPDGASPTA--APGAAG 252
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 87 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 188
+GFV D A+K++ G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -1
Query: 312 RGNRCGRG-PAPSGTPWTSGPRGHSG----STARGRPCPAAA 202
+G + RG P PSG P GP G G S G P PA A
Sbjct: 192 QGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGA 233
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGST---ARGRPCPAAA 202
GP +GTP T G G++G+ A PCPA A
Sbjct: 239 GPGNAGTPGTPGAPGNAGAPGGDAAYCPCPARA 271
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = -1
Query: 300 CGRG-PAPSGTPWTSGPRGHSGSTAR----GRPCPAA-AGHDSSTTAPSWA 166
C G P P+G P GP+G SG+ + G P PA G AP A
Sbjct: 131 CPAGAPGPAGAPGAPGPQGPSGAPGQDAVGGGPGPAGPQGPAGDAGAPGQA 181
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 309 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 178
G R GP PSG P GP G G P+ AG + A
Sbjct: 168 GARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGA 212
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -1
Query: 309 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 178
G R GP PSG P GP G G P+ AG + A
Sbjct: 221 GARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGA 265
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 312 RGNRCGRGPAPSGTPWTSGPRGHSGSTAR-GRPCPAA-AGHDSS 187
RG+ GP G +GP G G+ + G+P PA AG D +
Sbjct: 212 RGSGAPGGPGAPGNAGPAGPAGQDGAPGQDGQPGPAGPAGQDGA 255
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.6
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 312 RGNRCGRGPAPSGTPWTSGPRGHSGSTAR-GRPCPAA-AGHDSS 187
RG+ GP G +GP G G+ + G+P PA AG D +
Sbjct: 224 RGSGAPGGPGAPGNAGPAGPAGQDGAPGQDGQPGPAGPAGQDGA 267
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 321 TLDRGNRC-GRGPAPSGTPWTSGPRGHSGSTAR-GRP 217
T DRG G P P+G P GPRG SG G+P
Sbjct: 196 TGDRGKVLNGAPPGPTGPPGKVGPRGLSGGKGHDGKP 232
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRP--CPAAAGHDSSTTAP 175
P P G P GP G G+ P AAG D AP
Sbjct: 154 PGPDGQPGQDGPAGIDGAPGEAGPQGDAGAAGQDGEAGAP 193
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 141 LNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 281
L G Q ++ S + + + D CY+CG GH++ C K
Sbjct: 222 LPGQTRQNQDHHHRVDLSLIPDKKNLSDVT-CYKCGEKGHYANRCHK 267
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 309 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
GN+ GP P G P +GP G +G G P P + G P
Sbjct: 174 GNKGPAGPPGPGGKPGPAGPPGENG--RNGEPQPGSPGEPGRPGQP 217
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 204 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 323
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 204 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 323
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3
Query: 204 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 323
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -1
Query: 309 GNRCGRG-PAPSGTPWTSGPRGHSGST-ARGRP-CPAAAGHDSS 187
G+ G G P P G P SG GHSG+ G P P + G D++
Sbjct: 223 GHSGGAGSPGPQGPPGPSGQPGHSGNDGVPGAPGNPGSPGGDAA 266
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVR 203
+ YGFV + D A++E++G V +P+K++ S + R
Sbjct: 244 KGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWKER 284
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.5
Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 8/98 (8%)
Frame = +3
Query: 30 VRELFQKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 185
+R +F K G V+ +V + YGF+ AI+ LNG + G+ ++V
Sbjct: 34 IRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNLNGYELSGRILRVDS 93
Query: 186 STSRVRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDR 299
+ + G + EC P+R
Sbjct: 94 AAGGMNMEE-FGSSSNAPAPVEENPYGPECDAGKAPER 130
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
P P G P GP G SG A P + G D AP
Sbjct: 147 PCPQGPPGPPGPPGPSGD-AGSNGNPGSPGQDGQPGAP 183
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAGH 196
GP G P GP GH G P P GH
Sbjct: 180 GPGQPGQPGPHGPNGHPGKPGSQGP-PGPPGH 210
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 300 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 300 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 303 RCGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAP 175
+C GPA G P GP G +GS G+P P AG D P
Sbjct: 146 KCPEGPA--GPPGPEGPAGPAGSD--GQPGAPGDAGKDGPPGPP 185
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCP 211
P P GTP G G GS A PCP
Sbjct: 257 PGPMGTPGGPGEPGIPGSDAAYCPCP 282
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 309 GNRCGRGPAPSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTAPSW 169
G CG G +P G P G G +G+ G P ++T AP++
Sbjct: 117 GGCCGCGVSPQGPPGVPGRDGDNGADGEAGAPGKDGPDGPAATPAPNY 164
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 185
++R F+ +G + + +V R Y F+ +++ A K+ +G+ VDG+ + V
Sbjct: 119 KLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKRLVVDY 178
Query: 186 STSRVRQ 206
R ++
Sbjct: 179 ERGRTQK 185
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 291 GPA-PSGTPWTSGPRGHSGSTARGRPCPAAAGHDS 190
GPA +G P GP G+ GS P PA D+
Sbjct: 235 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 269
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 300 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 300 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 291 GPA-PSGTPWTSGPRGHSGSTARGRPCPAAAGHDS 190
GPA +G P GP G+ GS P PA D+
Sbjct: 245 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Frame = -1
Query: 315 DRGNRCGRGPAPSGTPWTSGPRGHSGST-ARGRP-CPAAAGHDSSTTAPSWA 166
D G G P+G P GP G+ G+ A G P P T P+ A
Sbjct: 198 DGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVTETPGTPGPAGA 249
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCP 211
P P G P +GP G G G+P P
Sbjct: 267 PGPQGPPGLAGPDGQPGHGGGGQPGP 292
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.6 protein.
Length = 290
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAA 202
P +G P G G G +RG P PA A
Sbjct: 178 PGQAGAPGHPGAPGQGGQRSRGTPGPAGA 206
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = -1
Query: 312 RGNRCGRG-PAPSGTPWTSGPRGHSG----STARGRPCPAAA 202
+G + RG P P+G P GP G G S G P PA A
Sbjct: 192 QGGQRSRGTPGPAGAPGPQGPAGGPGQPGQSGGAGAPGPAGA 233
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -1
Query: 300 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GPA G P +GP G +G+ P A G D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGQDGQPGAP 183
>Z66499-3|CAA91300.1| 348|Caenorhabditis elegans Hypothetical
protein T01B7.7 protein.
Length = 348
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 315 DRGNRCGRGPAPSGTPWTSGPRGHSGSTAR 226
D G R P P G P +GP G G T R
Sbjct: 254 DDGERPLGRPGPRGPPGEAGPEGPQGPTGR 283
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAP 175
P P+G ++GP G G GRP P +AGH + P
Sbjct: 151 PGPAGPAGSAGPAGPKGPD--GRPGQPGSAGHPGAPGQP 187
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = -1
Query: 312 RGNRCGRG-PAPSGTPWTSGPRGHSG----STARGRPCPAA-AGHDSSTTAP 175
RG + G P PSG P GP G G S +G+ PA AG D P
Sbjct: 196 RGGQRSHGLPGPSGAPGPQGPSGAPGQPGQSGGQGQQGPAGPAGPDGQPGQP 247
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -3
Query: 187 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 38
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -3
Query: 187 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 38
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>U80441-8|AAB37656.1| 284|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 5 protein.
Length = 284
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 276 GTPWTSGPRGHSGSTARGRPCP 211
GTP +GP+G G+ A PCP
Sbjct: 256 GTPGQAGPQGAVGADAEYCPCP 277
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRP 217
P G P +GP G G T +G+P
Sbjct: 187 PGQDGQPGLAGPPGRDGLTGKGQP 210
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSG 238
G P P GTP GP+G SG
Sbjct: 98 GCPPGPPGTPGEQGPQGESG 117
>U55373-4|ABR92605.1| 210|Caenorhabditis elegans Collagen protein
140, isoform b protein.
Length = 210
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSG 238
G P P GTP GP+G SG
Sbjct: 98 GCPPGPPGTPGEQGPQGESG 117
>M34451-1|AAA28143.1| 348|Caenorhabditis elegans protein (
C.elegans collagen (rol-6) gene, complete cds. ).
Length = 348
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = -1
Query: 315 DRGNRCGRGPAPSGTPWTSGPRGHSGSTAR 226
D G R P P G P +GP G G T R
Sbjct: 254 DDGERPLGRPGPRGPPGEAGPEGPQGPTGR 283
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Frame = -3
Query: 187 DNCTFMGCPSTIIPF------NSLIASFTSPVASKCTKP*LRTISHSTTVPNF*NS 38
D C M ++P+ N+++ + VA KC K IS S +P+F N+
Sbjct: 680 DECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRSGYLPDFDNN 735
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 199
P P G P G G G+ A PCP G
Sbjct: 297 PGPDGQPGAPGNDGTPGTDAAYCPCPGRGG 326
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 517 PRAPXDPPNSSPRDAPPTG 461
PRA PP PR +PPTG
Sbjct: 292 PRAGSPPPPPPPRGSPPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 517 PRAPXDPPNSSPRDAPPTG 461
PRA PP PR +PPTG
Sbjct: 313 PRAGSPPPPPPPRGSPPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 517 PRAPXDPPNSSPRDAPPTG 461
PRA PP PR +PPTG
Sbjct: 298 PRAGSPPPPPPPRGSPPTG 316
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +3
Query: 27 EVRELFQKFGTVVECDIVRNY--GFVHLD--ATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
E+ + QK+G V + + N+ G V + T + + A+K L+G +VDG+ + +L
Sbjct: 337 EMTQSCQKYGIVKKVVVYANHPDGVVSVTFPTTEESDMAVKYLHGRVVDGRKLTAELWDG 396
Query: 195 RVR 203
R +
Sbjct: 397 RTK 399
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 490 NWADLXELAVTSFL-RPYAA-NPCHPCLIYLHCGXEW 594
N +L + T+ + RPY A NP PC++ HC +
Sbjct: 527 NEPELHRIVTTAMMHRPYGAQNPHSPCMVDGHCSKRY 563
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSGST-ARGRP 217
G GP P+G GP G+ GS A G+P
Sbjct: 192 GSGPGPAGPAGPPGPDGNPGSAGADGQP 219
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAA 202
P G P GP G +G+ +G+P P A
Sbjct: 196 PGLPGPPGEDGPVGQNGTRGQGQPGPVGA 224
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSGST-ARGRP 217
G GP P+G GP G+ GS A G+P
Sbjct: 192 GSGPGPAGPAGPPGPDGNPGSAGADGQP 219
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical
protein C44C10.1 protein.
Length = 300
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -1
Query: 312 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAPS 172
+G CG G + +G P G G GS G+P P G D P+
Sbjct: 102 QGGCCGCGVSAAGPPGAPGQDGEDGSD--GQPGAPGNDGPDGPAATPA 147
>Z68113-3|CAA92150.1| 333|Caenorhabditis elegans Hypothetical
protein E03G2.4 protein.
Length = 333
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = -1
Query: 309 GNRCGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 172
G CG G +P G P G G GS P G D+ P+
Sbjct: 136 GGCCGCGQSPPGPPGRPGSDGSPGSDGEA-GIPGRDGPDAPRATPA 180
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 297 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 187
G P P+G P GP G G + P A G+D +
Sbjct: 225 GSTPGPAGPPGPPGPNGQPGHPGQDGQ-PGAPGNDGA 260
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+ +GFV D + AIK LN + + G+P+KV +++
Sbjct: 54 QGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASA 91
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -1
Query: 291 GPAPSGTPWTSGPRGHSGSTARGRP 217
GP P G P G G G RG P
Sbjct: 154 GPGPKGPPGPPGGHGEPGPAGRGGP 178
>U55857-11|AAA98036.1| 153|Caenorhabditis elegans Hypothetical
protein K08D10.11 protein.
Length = 153
Score = 27.5 bits (58), Expect = 7.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = -3
Query: 256 PPRPQR*HCSGSPMPGRCRTRLVDNCTFMGCPSTIIPFNSLIASF 122
PPRP S SP PG R + F G ++ F SLI F
Sbjct: 48 PPRPPSLSASSSPAPGSARKPYFFSIFFRGV--ALMIFCSLICDF 90
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GP P+G GP G+SGS + P A G++ + P
Sbjct: 157 CPAGPPGPAGPAGPKGPNGNSGSDGQ----PGAPGNNGNAGGP 195
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GP P+G GP G+SGS + P A G++ + P
Sbjct: 219 CPAGPPGPAGPAGPKGPNGNSGSDGQ----PGAPGNNGNAGGP 257
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 172
P P G GP+G +G+ A+ P A ++ P+
Sbjct: 193 PGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPA 231
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein
170 protein.
Length = 300
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = -1
Query: 321 TLDRGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAPS 172
+ +G CG G + +G P G G G A G+P P G D P+
Sbjct: 99 SFSQGGCCGCGVSAAGPPGAPGQDGEDG--ADGQPGAPGNDGPDGPAATPA 147
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GP P+G GP G+SGS + P A G++ + P
Sbjct: 156 CPAGPPGPAGPAGPKGPNGNSGSDGQ----PGAPGNNGNAGGP 194
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein
169 protein.
Length = 300
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GP P+G GP G+SGS + P A G++ + P
Sbjct: 156 CPAGPPGPAGPAGPKGPNGNSGSDGQ----PGAPGNNGNAGGP 194
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein
168 protein.
Length = 301
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GP P+G GP G+SGS + P A G++ + P
Sbjct: 157 CPAGPPGPAGPAGPKGPNGNSGSDGQ----PGAPGNNGNAGGP 195
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein
167 protein.
Length = 301
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 300 CGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
C GP P+G GP G+SGS + P A G++ + P
Sbjct: 157 CPAGPPGPAGPAGPKGPNGNSGSDGQ----PGAPGNNGNAGGP 195
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 81 RNYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTS 194
+ +GFV D + AIK LN + + G+P+KV +++
Sbjct: 64 QGFGFVEFMGEEDADYAIKILNMIKLYGKPIKVNKASA 101
>M25478-1|AAA27992.1| 168|Caenorhabditis elegans collagen protein.
Length = 168
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = -1
Query: 309 GNRCGRGPA-PSGTPWTSGPRGHSGSTAR-GRP-CPAAAG 199
G + PA P G P SG +GH G + G+P P AG
Sbjct: 72 GQQASNCPAGPPGPPGASGDKGHDGQPGQAGKPGQPGVAG 111
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTAP 175
P P+G P GP G G + G P A G AP
Sbjct: 277 PGPAGPPGPPGPSGAPGHPGQAGSSLPGAPGPQGDAGAP 315
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 210 PGMGDPEQCYRCGRGGHWSKEC--PKALGPDRNGFRD 314
P + + +C CG GH SK+C PK + G D
Sbjct: 447 PNVTNQIKCTNCGAFGHISKDCKNPKGMYASEAGMDD 483
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -1
Query: 312 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAG 199
+G G GP P G P GP +G G P P AAG
Sbjct: 427 QGGPGGFGPPPPGGPGAYGP-PPTGFPPVGAPPPGAAG 463
>AL031630-5|CAA20985.1| 915|Caenorhabditis elegans Hypothetical
protein Y38H6C.5 protein.
Length = 915
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 234 CYRCGRGGHWSKEC-PKALGPDRNGFR 311
CY CG+ GH + EC K +NG R
Sbjct: 411 CYYCGKRGHTANECRRKKSDESQNGER 437
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 210 PGMGDPEQCYRCGRGGHWSKEC--PKALGPDRNGFRD 314
P + + +C CG GH SK+C PK + G D
Sbjct: 447 PNVTNQIKCTNCGAFGHISKDCKNPKGMYASEAGMDD 483
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 189 TSRVRQRPGMGDPEQCYRCGRGGHWSKEC 275
TS + + G G C+ C + GH + EC
Sbjct: 189 TSPILEAKGFGISNTCFNCKKYGHRATEC 217
>AF047652-1|AAO44912.1| 294|Caenorhabditis elegans Collagen protein
107, isoform b protein.
Length = 294
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 309 GNRCGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 175
G R P P+G +GP G G+ + P AG + AP
Sbjct: 197 GQRGSGAPGPAGPEGPAGPAGQDGAPGQD-GAPGNAGSEGPAGAP 240
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 189 TSRVRQRPGMGDPEQCYRCGRGGHWSKEC 275
TS + + G G C+ C + GH + EC
Sbjct: 189 TSPILEAKGFGISNTCFNCKKYGHRATEC 217
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 288 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 172
P P G GP+G +G+ A+ P A ++ P+
Sbjct: 193 PGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAGDAGPA 231
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,439,259
Number of Sequences: 27780
Number of extensions: 233898
Number of successful extensions: 1935
Number of sequences better than 10.0: 163
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1855
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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