Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L09
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    27   0.20 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    27   0.20 
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   1.9  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.6  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = +3

Query: 96  IMAQNLQKKPSKGILKXSRSVDGSDGMPSCSKRAKEQRFDEMNIMETF 239
           I+   +  K +KG +K +++V+GSD     S R    R     I  TF
Sbjct: 207 IIIITIWSKNAKGFIKNTKAVNGSDNSRRASSRGLIPRAKVKTIKITF 254


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 19/43 (44%), Positives = 20/43 (46%)
 Frame = -2

Query: 501 GIHCNAFSFSSRTRYAFGVLPPAPPCPRHYRHRTPRTSAACSC 373
           G+H    S  S T  A G LPP  P PR  R  T R  A C C
Sbjct: 255 GLHATG-SAPSPTAGAGG-LPPQVPSPRSQRRYTGR--ATCDC 293


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 327 LVPNHRLPSPKKAF*VLLPSCDHSPYSVDEKSP 229
           L P   +PSPK++  +L      SP +    SP
Sbjct: 71  LPPKREIPSPKRSSPILAEKVSVSPTTPPTPSP 103


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 456 AFGVLPPAPPCPRHYRHRTP 397
           AF V  P PP P H   R P
Sbjct: 730 AFDVKLPPPPHPHHQPPRNP 749


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -2

Query: 456 AFGVLPPAPPCPRHYRHRTP 397
           AF V  P PP P H   R P
Sbjct: 622 AFDVKLPPPPHPHHQPPRNP 641


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +3

Query: 75  KMPI*TKIMAQNLQKKPSKGILKXSRSVDGSDGMPSCSKRAKEQRFDEMNI 227
           K P   K   ++ ++KP+        S D  D  P      K Q F  +NI
Sbjct: 75  KKPENVKKEDESDEEKPTTSFKLKDSSSDSEDERPRPGGGTKYQTFSNLNI 125


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -2

Query: 561 CRHYLRHLLEPSAVEPVVMPGIHC 490
           CR       EP+  EPV  PG  C
Sbjct: 82  CRSIKNECPEPTCDEPVHRPGRCC 105


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 266 VTIVLIRWMKSLHNVHFIKSLFF 198
           ++ +LI    +LH V++I  LFF
Sbjct: 202 ISFLLIISYSTLHFVNYIDDLFF 224


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,824
Number of Sequences: 336
Number of extensions: 3393
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)