Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L09
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006733-5|AAF60485.2|  193|Caenorhabditis elegans Hypothetical ...    67   1e-11
AC024757-8|AAF59454.2|  215|Caenorhabditis elegans Hypothetical ...    36   0.022
U21324-3|AAA62565.2|  166|Caenorhabditis elegans Hypothetical pr...    33   0.21 
U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin p...    32   0.47 
AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical...    31   0.83 
AF077540-3|AAC26312.2|  421|Caenorhabditis elegans C-type lectin...    29   2.5  

>AC006733-5|AAF60485.2|  193|Caenorhabditis elegans Hypothetical
           protein Y32H12A.4 protein.
          Length = 193

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 37/76 (48%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
 Frame = +3

Query: 102 AQNLQKKPSKGILKXSR--SVDGSDGMPSCSKRAKEQRFDEMNIMETFHPPNKDYGHMKV 275
           A+ L++KP K ILK  +  S++G DG      RA    FDEMNI+ T+HP +KDYG MK+
Sbjct: 25  AEFLKRKPKKSILKMKQDSSLEGKDG------RA---HFDEMNILATYHPTDKDYGSMKI 75

Query: 276 EEPKTPFSETVDGDLE 323
           +EPKTP+  + DG+ E
Sbjct: 76  DEPKTPYHHS-DGESE 90


>AC024757-8|AAF59454.2|  215|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.2 protein.
          Length = 215

 Score = 36.3 bits (80), Expect = 0.022
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +3

Query: 180 SCSKRAKEQRFDEMNIMETFHPPNKDYGHMKVEEPKTP 293
           S   R++   FD  N++ET+ P  + +GH+ V +P TP
Sbjct: 83  SSMTRSRRACFDVANVLETYQPRARTHGHLFVPDPPTP 120


>U21324-3|AAA62565.2|  166|Caenorhabditis elegans Hypothetical
           protein C35D10.8 protein.
          Length = 166

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 192 RAKEQRFDEMNIMETFHPPNKDYGHMKVEEPKTP 293
           RA+   F+E N++ T+ P    +GH+ V +P TP
Sbjct: 59  RARRAIFNERNLLVTYQPRALTHGHLFVPDPPTP 92


>U88184-1|AAK31517.1|  476|Caenorhabditis elegans C-type lectin
           protein 19 protein.
          Length = 476

 Score = 31.9 bits (69), Expect = 0.47
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +1

Query: 433 SRRKYA--ESVSSSRRKGKCITMNSRHYNWLDS*WLKKMTKIMTTKPRSLPPDCQ-RWPS 603
           S  KY+  ES   +  KG+C+T+N+    W  +   KK    +   P +    CQ  +  
Sbjct: 194 SAEKYSGFESEGLNSEKGRCVTVNTTSGYWSSTHCEKKANMFVCELPTTFEDTCQHNYNG 253

Query: 604 YCKKHTLASSWFGINTT 654
           +C       S+ G  TT
Sbjct: 254 FCYIPHSPKSFIGAFTT 270


>AL110478-10|CAE17956.3|  758|Caenorhabditis elegans Hypothetical
           protein Y26D4A.13 protein.
          Length = 758

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +3

Query: 186 SKRAKEQRFDEMN-IMETFHPPNKDYGHMKVEEPKTP 293
           +K+ +E+  DE N I+ET +     Y  + +E+PKTP
Sbjct: 56  NKKLQEEIIDEKNKIVETLNNFKPSYKQLSIEQPKTP 92


>AF077540-3|AAC26312.2|  421|Caenorhabditis elegans C-type lectin
           protein 21 protein.
          Length = 421

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +1

Query: 463 SSRRKGKCITMNSRHYNWLDS*WLKKMTKIMTTKPRSLPPDCQ-RWPSYCK-KHTLASSW 636
           S  R+  C+T+N+    W+ + +   M   +   P ++  DCQ  +  YC   H+ A S+
Sbjct: 120 SGSRETPCVTVNTTTGYWISTKYENGMYPFVCEMPTTIEDDCQNNYNGYCYIPHSEAKSF 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,327
Number of Sequences: 27780
Number of extensions: 314415
Number of successful extensions: 796
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 796
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)