Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_L07
(743 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 42 9e-05
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 37 0.003
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 37 0.003
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 35 0.014
SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomy... 34 0.019
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 34 0.025
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 33 0.033
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 33 0.043
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 33 0.043
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 33 0.057
SPBC530.01 |gyp1||GTPase activating protein Gyp1 |Schizosaccharo... 32 0.099
SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces pom... 31 0.17
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 31 0.17
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 31 0.23
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 30 0.30
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 30 0.40
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 30 0.40
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 0.53
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 29 0.53
SPCC1393.02c |||non-specific DNA binding protein Spt2 |Schizosac... 29 0.53
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 29 0.70
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 29 0.70
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 28 1.2
SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr 1||... 28 1.2
SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyce... 28 1.6
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 28 1.6
SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Ma... 28 1.6
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 28 1.6
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 28 1.6
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 28 1.6
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 27 2.1
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 27 2.1
SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26 |Schizosac... 27 2.1
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 27 2.1
SPAC21E11.03c |pcr1|mts2|transcription factor Pcr1|Schizosacchar... 27 3.7
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 27 3.7
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 27 3.7
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 26 4.9
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 26 4.9
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 4.9
SPBC13E7.06 |msd1|mug172|spindle pole body protein Msd1|Schizosa... 26 6.5
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.5
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 26 6.5
SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr 1|... 26 6.5
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 6.5
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 26 6.5
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 25 8.6
SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21 |Schizosac... 25 8.6
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 8.6
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 8.6
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 25 8.6
SPBC11B10.03 |cog8||Golgi transport complex subunit Cog8 |Schizo... 25 8.6
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 25 8.6
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 41.9 bits (94), Expect = 9e-05
Identities = 31/125 (24%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
Frame = +3
Query: 294 DAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQK-LEQRV 470
+A RLA++ + A+ QE+ RK E+Q + + + E K +K QK E+++
Sbjct: 616 EAERLAEQAAQKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKL 675
Query: 471 RELENELDGE-----QRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 635
++ + E D E QR + +K + + ER+ +E + EE+R+ E ++ ++ +++
Sbjct: 676 KKQQQEADREKMAREQRLREEEEKRILE-ERKRREKLDKEEEERRRRELLEKESEEKERR 734
Query: 636 IKTYK 650
++ K
Sbjct: 735 LREAK 739
Score = 33.1 bits (72), Expect = 0.043
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Frame = +3
Query: 312 DELRAEQDHAQ--TQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELEN 485
DE ++D T E+ + + + RL E K A Q+ + + E+E
Sbjct: 519 DEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVAQQRQAKLLEEIEE 578
Query: 486 ELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 656
E +Q R + K + K+L EE+R+ E + L ++ QK KRQ
Sbjct: 579 ENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRRE-AERLAEQAAQKALEAKRQ 634
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 37.1 bits (82), Expect = 0.003
Identities = 32/127 (25%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Frame = +3
Query: 315 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDE-----AEANALKGGKKAIQKLEQRVREL 479
EL AE+ + Q Q K ++L Q+ ++ +L+E ++ N ++ + ++ +R+R L
Sbjct: 196 ELHAERANLQLQLKRTESLLQKSEDKNFKLEEKVDYLSKVNDVEQSQN-VKVFTERIRFL 254
Query: 480 ENELDGEQRRHADAQKNLRKS--------ERRIKELTFQAEEDRKNHERMQDLVDKLQQK 635
EN L+ QR + + E I++L + +E + + QDL+ + + +
Sbjct: 255 ENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDE 314
Query: 636 IKTYKRQ 656
I T KRQ
Sbjct: 315 IATLKRQ 321
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 36.7 bits (81), Expect = 0.003
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +3
Query: 438 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 617
K+A ++ EQR+RE E + E++R A+ ++ RK E R+K + E++RK E M+
Sbjct: 257 KRAREEEEQRIREEEARIAEEEKRLAEVEE-ARKEEARLK----KKEKERKKKEEMKAQG 311
Query: 618 DKLQQKIK 641
L +K K
Sbjct: 312 KYLSKKQK 319
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 34.7 bits (76), Expect = 0.014
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +3
Query: 306 LADELRAEQDHAQTQE--KLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVREL 479
L D++ + + + E L+ A Q + ++RLD A + K+ +E+R L
Sbjct: 102 LKDKIEDQNNSLEKTEFIALQNANSLQDTQAKLRLDPLLAIKQQEQKQLQTLMEKRKYSL 161
Query: 480 ENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTY 647
+++ ++RRH D + R + Q D++ H R D+ + +T+
Sbjct: 162 DSDRKSKERRHRDRHHRSNQDRSRERSDNEQHSSDKREHSRRSYRNDRNNWRERTH 217
>SPBC3B9.19 |mge1||GrpE domain chaperone protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 223
Score = 34.3 bits (75), Expect = 0.019
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 13/112 (11%)
Frame = +3
Query: 324 AEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRE-------LE 482
A ++ +EK+ + +KELQ +L E ++ + K + +L+ +R+ LE
Sbjct: 34 AAKEEKPAEEKVAETENVDVKELQSKLSELKSK-YEAKDKEVAELKGSIRQSLADYRNLE 92
Query: 483 NEL--DGEQRRHADAQ---KNLRKSERRI-KELTFQAEEDRKNHERMQDLVD 620
N + D EQ R Q K+L S + + L+ EE R N E +DLVD
Sbjct: 93 NRMKRDMEQTRAFAVQKLTKDLLDSVDNLERALSIVPEEKRNNRESNKDLVD 144
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 33.9 bits (74), Expect = 0.025
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Frame = +3
Query: 309 ADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLE-QRVRELEN 485
A E R Q A E+L++ E+Q +E + +L E E A K K ++KLE +R+R
Sbjct: 85 AQEERIRQKEA---ERLKREKERQQREQEKKLREQEKIAAK-KMKELEKLEKERIR---- 136
Query: 486 ELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQ 608
L +QRR + + LR+ E E +E N ER Q
Sbjct: 137 -LQEQQRRKEERDQKLREKE----EAQRLRQEQILNKERQQ 172
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 33.5 bits (73), Expect = 0.033
Identities = 32/112 (28%), Positives = 59/112 (52%), Gaps = 1/112 (0%)
Frame = +3
Query: 303 RLADELRAEQD-HAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVREL 479
R+A E A+Q QTQ +L + LEQQ+ + +L+++ N L + + + RVR L
Sbjct: 395 RIAQEQLAQQQFQMQTQGQLAE-LEQQLLATRGQLEQS--NVL------LNQYDARVRTL 445
Query: 480 ENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 635
ENEL + + Q+ + +++ I+ L Q + +E + L +L+Q+
Sbjct: 446 ENEL---SQAGVNLQEQIHQNDDLIESLKNQILTWKNKYEALAKLYTQLRQE 494
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 33.1 bits (72), Expect = 0.043
Identities = 24/107 (22%), Positives = 49/107 (45%)
Frame = +3
Query: 336 HAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHA 515
H + L + ++ E V D AE + +G +K+ + E++ + L+G+ + A
Sbjct: 27 HDDLDDVLSSSSDEDNNE-NVGQDYAEESGGEGNEKSEDEFEEKFKN-PYRLEGKFKDEA 84
Query: 516 DAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 656
D K + +E + + F+ EE+ ++L +L Q+ Y Q
Sbjct: 85 DRAKIMAMTEIERESILFEREEEISKLMERRELAIRLHQQNAQYMAQ 131
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 33.1 bits (72), Expect = 0.043
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +3
Query: 453 KLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNH----ERMQDLVD 620
K +++ELEN L E++R+ + +K +R+ ++ +KEL Q +K QD++D
Sbjct: 219 KDSNQIQELENLLRKEKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILD 278
Query: 621 KLQQK 635
K+ +
Sbjct: 279 KMNDE 283
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 32.7 bits (71), Expect = 0.057
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 9/121 (7%)
Frame = +3
Query: 306 LADELRAEQDHAQTQEKLRKA-----LEQQIKELQVRLD-EAEANALKGGKKAIQKLEQR 467
L+ EL A ++H+ TQ L A L Q++ + + E E L + + + E+
Sbjct: 1547 LSAELAALREHSPTQGSLENADEIARLRSQLESTKQYYEKEKETEILAARSELVAEKEKT 1606
Query: 468 VRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEED--RKNHERMQDLV-DKLQQKI 638
ELEN+L+ + +RIKEL QA+++ H+ + D++ ++++K+
Sbjct: 1607 KEELENQLN--------------EKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKL 1652
Query: 639 K 641
K
Sbjct: 1653 K 1653
>SPBC530.01 |gyp1||GTPase activating protein Gyp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 31.9 bits (69), Expect = 0.099
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +3
Query: 477 LENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQ 629
L LDG Q + AQ +R+ ++ELT + +E H +M+ VD LQ
Sbjct: 364 LSKLLDGIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEG-VDFLQ 413
>SPBC27B12.07 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 31.1 bits (67), Expect = 0.17
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Frame = +3
Query: 324 AEQDHAQTQEKLRKAL-EQQIKELQVRLDEAEA--NALKGGKKAIQKLEQRVRELENELD 494
+E D R AL E + +++ +R D+ + + L ++ ++ LEQ V E N+L+
Sbjct: 122 SEADFENCSYLFRTALSELRSEKINMRKDQISSLRSGLFSNQREVESLEQLVHEQLNKLN 181
Query: 495 GEQRRHADAQKNLRKSE 545
E + + +KN K+E
Sbjct: 182 TESKMEFENRKNDTKNE 198
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.1 bits (67), Expect = 0.17
Identities = 21/94 (22%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Frame = +3
Query: 351 EKLRKALEQQIKELQVRLDEAEANALKGGKKAIQ----KLEQRVRELENELDGEQRRHAD 518
E+++ E + ++ +R EA+ + KK IQ +LE+R +L N+L+ Q
Sbjct: 1988 ERIKGIDECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLEDVQASETQ 2047
Query: 519 AQKNLRKSERRIKELTFQAEEDRKNHERMQDLVD 620
+ LR++E ++E + + + ++ + L++
Sbjct: 2048 WKFALRRTEHALQEERERVKSLETDFDKYRSLLE 2081
Score = 26.6 bits (56), Expect = 3.7
Identities = 31/180 (17%), Positives = 63/180 (35%)
Frame = +3
Query: 21 QLGISERRANALQNELEESRTLLEQADRARRQAEQELSDAHEXXXXXXXXXXXXXXXXXX 200
+L I++ R L N+L+E + L + D +A + HE
Sbjct: 861 ELTITKERVLQLTNDLQEEQALAHEKDILVERANSRVEVVHERLSSLENQVTIADEKYEF 920
Query: 201 XXXELQTLHSDLDELLXXXXXXXXXXXXXMVDAARLADELRAEQDHAQTQEKLRKALEQQ 380
E Q++ DL + + + + + EK +
Sbjct: 921 LYAEKQSIEEDLANKQTEISYLSDLSSTLEKKLSSIKKDEQTISSKYKELEKDYLNIMAD 980
Query: 381 IKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKE 560
+ L E A+ I++L +++ L++EL +QR + + LR+ +K+
Sbjct: 981 YQHSSQHLSNLE-KAINEKNLNIRELNEKLMRLDDELLLKQRSYDTKVQELREENASLKD 1039
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 30.7 bits (66), Expect = 0.23
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +3
Query: 300 ARLAD-ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRE 476
+ +AD LR +Q+ + +RK+L+ + + + ++E + A+ + I +L +
Sbjct: 482 SEIADLSLRLQQEELSLDD-IRKSLQGKTEGISNAIEEKQ-KAMAPALEKINQLTSEKQI 539
Query: 477 LENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDR 587
L+ ELD + D ++ S+ + +L AEE+R
Sbjct: 540 LQVELDMLLNKENDLINDVESSQSSLDKLRNDAEENR 576
Score = 28.7 bits (61), Expect = 0.92
Identities = 20/88 (22%), Positives = 42/88 (47%)
Frame = +3
Query: 378 QIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIK 557
Q+++ + R +E +L + ++ +R+ E E+ Q + + + ERRI
Sbjct: 819 QLEDTRYRQHLSELESLN---QRFTEISERIPSAELEISKLQLDVSACDRLVAGEERRIL 875
Query: 558 ELTFQAEEDRKNHERMQDLVDKLQQKIK 641
+L + R N+ER ++L +K+ K
Sbjct: 876 QLKSDLKSIRNNNERKRNLQNKISNMDK 903
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 30.3 bits (65), Expect = 0.30
Identities = 21/90 (23%), Positives = 45/90 (50%)
Frame = +3
Query: 312 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 491
DE+ +A+ +++ K L++ +E QV++D+A + K+ +K+E RV E +
Sbjct: 175 DEIFESLRYAKALDQI-KGLKRD-QETQVKVDQATLTHYRSDKERAEKIELRVHESLKRI 232
Query: 492 DGEQRRHADAQKNLRKSERRIKELTFQAEE 581
+ + + + + ++ R EL EE
Sbjct: 233 SCIRSKVEELDQEITETARLQDELFKSTEE 262
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 29.9 bits (64), Expect = 0.40
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Frame = +3
Query: 312 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 491
DEL + Q+ + LEQQI +L L E N ++ K ++K +++ +L ++L
Sbjct: 528 DELHEAINSKNVQQSRSEELEQQISKLTDNLQEYR-NTVRELKLDLEKSKKKNEDL-SKL 585
Query: 492 DGEQ-RRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVD------KLQQKIKTYK 650
+ E+ A+ +K L ++ +E F+ ++ N + L++ KL Q +KT K
Sbjct: 586 EVEKVEEIANLKKELTHLAKQ-QEFGFKYVQEFSNEDLQGKLIEANEKNYKLTQLLKTQK 644
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 29.9 bits (64), Expect = 0.40
Identities = 22/119 (18%), Positives = 60/119 (50%), Gaps = 3/119 (2%)
Frame = +3
Query: 309 ADELRAEQD-HAQTQEKLRKALEQQIKELQVR--LDEAEANALKGGKKAIQKLEQRVREL 479
AD L +++ Q L++ E + + L+V+ +++ A ++ K+AI+ E +
Sbjct: 574 ADTLATQREAELAAQRALKQKQESEAESLRVQEEINKRNAERIRREKEAIRINEAKKLAE 633
Query: 480 ENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 656
E + G +A+ ++L + R ++ ++++ +ER++ + ++ + Y+R+
Sbjct: 634 ELKAKGGLEVNAEDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYRRE 692
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.5 bits (63), Expect = 0.53
Identities = 22/108 (20%), Positives = 44/108 (40%)
Frame = +3
Query: 315 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELD 494
E + + H Q E+L K Q K+ + ++++ E+ + L+
Sbjct: 1412 EAKVAECH-QLNEQLNKPSATPTATTQSEPSTVSLEEFNSTKEELSSTQRKLSEIMDILN 1470
Query: 495 GEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKI 638
+ ++N KSE K+ EE+ + + MQ V +L+ +I
Sbjct: 1471 TTKEELEKVRQNSNKSEGTSKDTEIPNEEEMERKKVMQQEVLRLRSRI 1518
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 29.5 bits (63), Expect = 0.53
Identities = 16/72 (22%), Positives = 37/72 (51%)
Frame = +3
Query: 375 QQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRI 554
++++E DE ++LK ++ +QKL + LE + R +++ L + +RR+
Sbjct: 19 RKLEEFGQNPDEEIESSLKDVRQELQKLNEEQSRLEKNAQIPEYRVRESEAFLIRMQRRL 78
Query: 555 KELTFQAEEDRK 590
+ + E+ R+
Sbjct: 79 ESAEEEFEKQRR 90
>SPCC1393.02c |||non-specific DNA binding protein Spt2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 406
Score = 29.5 bits (63), Expect = 0.53
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 378 QIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRR-HADAQKNLRKSERRI 554
QI++L+ +A + + +KL QR REL + + EQRR A K + S R+
Sbjct: 24 QIEQLRKAQIREKAREITEERNRQRKL-QRERELRQKYEEEQRRQQAMEAKRIAASTRQT 82
Query: 555 KELTFQAEEDRKNHERMQDLVDKLQQK 635
E + E+ K +++ D+L+ K
Sbjct: 83 SERPPLSAEEAKRIREVKE-KDRLESK 108
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 29.1 bits (62), Expect = 0.70
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = +3
Query: 450 QKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQ 629
Q+LEQ EL ++R A+ Q+ + ERR KEL E+++K ER++ L+++ +
Sbjct: 106 QRLEQE--RFNRELLEKKRIEAERQRLKDEEERRKKEL---MEKEKKEKERIR-LIEEQK 159
Query: 630 QKIKTYKR 653
K +R
Sbjct: 160 HKENEQRR 167
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 29.1 bits (62), Expect = 0.70
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Frame = +3
Query: 351 EKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVREL------ENELDGEQRRH 512
E+ K +E++ ++ + RL AN KKA+++L Q+ REL E EL ++ +
Sbjct: 354 EEFHKLIEERQRQHEERLKRINAN-----KKALEELNQKKRELAQQQLKEQELLMQKIKE 408
Query: 513 ADAQKNLRKSERRIKELTFQAEED 584
D N R + +AE D
Sbjct: 409 TDRSGNKRLMLLETQHSLLKAEAD 432
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/105 (20%), Positives = 46/105 (43%)
Frame = +3
Query: 288 MVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQR 467
+V L ++L+ + + E + +E ++++L L E + +K E+R
Sbjct: 80 LVKFHNLEEKLQLTETKCRNAESEKSRVENELEDLTSSLFEEANRMVANARKETVASEKR 139
Query: 468 VRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHER 602
V +L+ +L DA+ L ++ ++ EL +HE+
Sbjct: 140 VNQLKKQL-------VDAETLLSSTQHQLTELKDVMHSMSDSHEQ 177
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +3
Query: 12 SREQLGISERRANALQNELEESRTLLEQADRARRQAE---QELSDAHE 146
+R++ SE+R N L+ +L ++ TLL + + +SD+HE
Sbjct: 129 ARKETVASEKRVNQLKKQLVDAETLLSSTQHQLTELKDVMHSMSDSHE 176
>SPAC26F1.02 |||pinin homologue|Schizosaccharomyces pombe|chr
1|||Manual
Length = 197
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/59 (28%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Frame = +3
Query: 339 AQTQEKLRKALEQQIKELQ----VRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQ 503
A+ +EKL K EQ+++EL+ + + E+ + K A+ +LE +L+ LD ++
Sbjct: 104 AELEEKLAKRREQELQELEKQEKIEAEILESRLQEQRKVALDELELDRNDLKKVLDNKK 162
>SPBC3E7.08c |rad13||DNA repair nuclease Rad13|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1112
Score = 27.9 bits (59), Expect = 1.6
Identities = 13/71 (18%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 438 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERM-QDL 614
++ I ++ + +E + + +RH + N E+R+KEL Q ++++ + + Q +
Sbjct: 697 EEMIIRMAEEEKEYDRFVSELNQRHETEEWNQEAFEKRLKELKNQKRSEKRDADEVTQVM 756
Query: 615 VDKLQQKIKTY 647
+ + Q+ ++ +
Sbjct: 757 IKECQELLRLF 767
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 27.9 bits (59), Expect = 1.6
Identities = 27/115 (23%), Positives = 57/115 (49%)
Frame = +3
Query: 312 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 491
++L A +Q +EKL L+ QIK+LQ D+ + A K + L + R +E ++
Sbjct: 19 EKLSASNSVSQ-KEKLEGDLKTQIKKLQRLRDQIKTWASSNDIKDKKALLENRRLIEAKM 77
Query: 492 DGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 656
E+ + + + ++ + + L+ ++ D K E+ QD + + ++ +RQ
Sbjct: 78 --EEFKAVEREMKIKAFSK--EGLSIASKLDPKEKEK-QDTIQWISNAVEELERQ 127
>SPAC1556.05c |||CGR1 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 111
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +3
Query: 438 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 617
K+ + ++++R +EL+ E + ++ HA+ + R QA+ DR ERM+ L
Sbjct: 42 KRKLDEIKEREKELKREKEEQRAAHAEKIRTRR-----------QAKADR---ERMELLQ 87
Query: 618 DKLQQKIKTYKRQ 656
KL QK+ +R+
Sbjct: 88 AKLHQKVIDRRRR 100
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/107 (21%), Positives = 43/107 (40%)
Frame = +3
Query: 315 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELD 494
E Q HA ++KL K E+ + Q L ++ K + L + +
Sbjct: 69 EADLSQKHATERQKLDKGDEETNETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKEN 128
Query: 495 GEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQK 635
Q+ + + ERR E+ +E+ E+M DL ++ ++K
Sbjct: 129 TPQQPKKSRNRQKERLERRKAEMKKMSEQAELESEKMADLKNEEKKK 175
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/113 (20%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Frame = +3
Query: 312 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKK---AIQKLEQRVRELE 482
+E E++ T + + L Q + L+ +E N +K ++ AIQ LE+R R ++
Sbjct: 251 EESEPEKELKATFNQQNQDLYNQTEALKSTNEEL-INQIKSAEELDSAIQVLEERYRTMQ 309
Query: 483 NELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIK 641
+ Q + + + +K+L EE + +++ D L+ +++
Sbjct: 310 RDEVKFQSAMSGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVE 362
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.9 bits (59), Expect = 1.6
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +3
Query: 474 ELENELDGEQRRHADAQKNLRKSERR-IKELTFQAEEDRKNHERMQDLVDKLQQKIKTYK 650
E ELD H K +R+S I F EE+ N + +DL+ + Q+I+ +
Sbjct: 435 ESRKELDKHSDWHFRINKRIRESSLHGINRCWFVMEEEWVNSKEEEDLITETAQEIEEQR 494
Query: 651 RQ 656
++
Sbjct: 495 QK 496
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 27.5 bits (58), Expect = 2.1
Identities = 18/102 (17%), Positives = 51/102 (50%)
Frame = +3
Query: 312 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENEL 491
++L ++ + + K L++++KEL+ ++ ++ ++ + + EQ+ +
Sbjct: 60 NDLEEQRSGSIDSKDKEKPLDEKVKELE-NANKTLSDLVRRIQIQRDEAEQKAEIYNRDA 118
Query: 492 DGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLV 617
++ H D +K L KS+ + +L ++ +E +QD++
Sbjct: 119 LNTKQEHLDIKKRLEKSDETVCKL-------KEENENLQDML 153
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +3
Query: 438 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDR---KNHERMQ 608
K+ I KLE+ N L+ +QR+ + + + +KEL Q + R + H+R
Sbjct: 41 KQKILKLEEIAASDSNSLNDDQRKALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQF 100
Query: 609 DLVDKLQQK 635
+ + ++K
Sbjct: 101 EATENAKRK 109
>SPCC1620.10 |cwf26||complexed with Cdc5 protein Cwf26
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 27.5 bits (58), Expect = 2.1
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +3
Query: 438 KKAIQKLEQRVRELENE--LDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQD 611
+K K Q + + N+ ++ EQ+ DA+ + K++TF+AEE RK E+ +
Sbjct: 84 EKTTNKPAQLWKAVGNDEVVESEQQDSHDAESIPQFGLLTGKQVTFKAEERRKREEKSSN 143
Query: 612 LVDKLQQK 635
L ++ +K
Sbjct: 144 LDEEELRK 151
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/99 (20%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +3
Query: 294 DAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEAN--ALKGGKKAIQKLEQR 467
D + L A ++ T+ + E+ ++ Q RL E + K + +Q+
Sbjct: 853 DLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQQNENLQRESAS 912
Query: 468 VRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEED 584
++++ NEL+ E + L + +KE E+D
Sbjct: 913 LKQINNELESELLEKTSKVETLLSEQNELKEKLSLEEKD 951
>SPAC21E11.03c |pcr1|mts2|transcription factor
Pcr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 171
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 501 QRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKLQQKIKTYKRQ 656
+R A K +K + IKEL A + +R+Q L+ +LQQ+ K Q
Sbjct: 18 ERNRIAASKFRQKKKEWIKELEQTANAAFEQSKRLQLLLSQLQQEAFRLKSQ 69
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/53 (24%), Positives = 28/53 (52%)
Frame = +3
Query: 348 QEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQR 506
++K K L++ K+ + + EAE A + KK + + + ++ +LD E +
Sbjct: 803 EKKSSKKLDKNTKDYETKRWEAEVRAKQSAKKPAKLSKDQQALVDAQLDAEAK 855
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.6 bits (56), Expect = 3.7
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +3
Query: 372 EQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDG-EQRRHADAQKNLRKSER 548
++QI++L+ +E E G + +KLE+ V L ELD + +A+K ++
Sbjct: 120 QKQIEDLKKEKEEME-----GSLQGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKE 174
Query: 549 RIKELTFQAEEDRKNHERMQ-DLVDKLQQKIK 641
++ + ++ K+ E+ + KL KI+
Sbjct: 175 ECEKSWLEQQKLYKDMEQENASTIQKLTSKIR 206
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 26.2 bits (55), Expect = 4.9
Identities = 22/105 (20%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Frame = +3
Query: 315 ELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELD 494
+LR + D+ Q+ + L ++++ L+ +E E N K +++ +++R+ + + +
Sbjct: 66 QLRLKADNEDIQKTEAEQLSRKVELLE---EELETN-----DKLLRETTEKMRQTDVKAE 117
Query: 495 GEQRRHADAQKNLRKSERRIKELT-----FQAEEDRKNHERMQDL 614
+RR ++ E++++E+T +AE D + H+ ++DL
Sbjct: 118 HFERRVQSLERERDDMEQKLEEMTDKYTKVKAELD-EVHQALEDL 161
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +3
Query: 303 RLADELRAEQDHAQT-QEKLRKALEQQIKELQ-VRLDEAEANALKGGKKAIQKLEQRVRE 476
R D++ Q+ ++ Q L+K L+ ++ LQ ++ D + ++ LEQ++
Sbjct: 293 RETDDVNIAQNKSKLIQRDLQKVLDYKLGILQSLKNDGPNGPSASAIDNDLKMLEQQLNV 352
Query: 477 LENELDGEQRRHADAQKNLR 536
L L+G + + A ++ LR
Sbjct: 353 LGRHLEGRKSQVAKLEERLR 372
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/29 (31%), Positives = 20/29 (68%)
Frame = +1
Query: 310 RTSSAPSRITLRPRRNSARLSSNKSRNSK 396
R S+PS++++RP+ S RL + ++ ++
Sbjct: 746 RMVSSPSKVSIRPKMKSVRLLAREASEAR 774
>SPBC13E7.06 |msd1|mug172|spindle pole body protein
Msd1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 6.5
Identities = 23/85 (27%), Positives = 37/85 (43%)
Frame = +3
Query: 303 RLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELE 482
RL +EL Q+ Q Q + LE+ EL + KG K K E ++ L+
Sbjct: 88 RLKNELELYQNECQLQLNKVRTLERDQAELITQN--------KGLKDVNAKNELTLKALK 139
Query: 483 NELDGEQRRHADAQKNLRKSERRIK 557
N+L R+H + L+ + +K
Sbjct: 140 NQLSVSLRQHEQQMETLKGNYGLVK 164
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 6.5
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 363 KALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRV--RELENELDGEQRRHADAQKNLR 536
+ L + KEL+ LD AE + K + ++ L + R L +R + K L+
Sbjct: 836 ETLVSEKKELKNLLD-AERRSKKAIQLELENLSSQAFRRNLSGSSSPSERSQSRELKLLQ 894
Query: 537 KSERRIKE 560
SE+R+KE
Sbjct: 895 ASEKRLKE 902
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.8 bits (54), Expect = 6.5
Identities = 20/84 (23%), Positives = 37/84 (44%)
Frame = +3
Query: 405 DEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEED 584
D A K K QK + ++ E+ L+ + + Q +++ K ++ D
Sbjct: 663 DSAVLKVNKPEMKEGQKKAEARKKKESPLEATEETNPWLQVPDQRTSSAKKLDKNSSKAD 722
Query: 585 RKNHERMQDLVDKLQQKIKTYKRQ 656
+KNH+ D V LQ+ ++ K Q
Sbjct: 723 KKNHKLKMDKVASLQELVEEPKVQ 746
>SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 6.5
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 354 KLRKALEQQIKELQVRLDEAEANALKGGK---KAIQKLEQRVRELENELDGEQRRHADAQ 524
K+R+ L Q+ E +RL++ + GK KA+++ + +E E ++ + Q
Sbjct: 148 KIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQERQ 207
Query: 525 KNLRKSE 545
N+ ++E
Sbjct: 208 ANVIRAE 214
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 6.5
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 447 IQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQDLVDKL 626
+Q +E+R+RELE E ++ A + + +ERR E + E H+ + ++D L
Sbjct: 193 LQYIEERLRELEEE------KNDLAVYHKKDNERRCLEYAIYSRE----HDEINSVLDAL 242
Query: 627 QQ 632
+Q
Sbjct: 243 EQ 244
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +3
Query: 357 LRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQ 503
+ K L + +KEL+ + A+ G K +Q +++ + E E L+G +
Sbjct: 1152 MAKKLPRNVKELKEIHGVSNEKAVNLGPKFLQVIQKFIDEKEQNLEGTE 1200
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/44 (25%), Positives = 28/44 (63%)
Frame = +3
Query: 480 ENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDRKNHERMQD 611
+N+L+ + +KNLRK + IK+ +A+++ +++++ +D
Sbjct: 282 QNQLENHENSKKH-KKNLRKMNQEIKKHAKEAQKNAESNKQPED 324
>SPAC4A8.09c |cwf21||complexed with Cdc5 protein Cwf21
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 293
Score = 25.4 bits (53), Expect = 8.6
Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 11/112 (9%)
Frame = +3
Query: 333 DHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRH 512
D A + ++K EQ +KELQ++ + + + ++ E R +N+ DG
Sbjct: 120 DEADVEILVQKYREQLLKELQLQKSTEKGKNFESILQPQKRKETRGFHSKNDDDGRLEER 179
Query: 513 ADAQKNL--------RKSERR---IKELTFQAEEDRKNHERMQDLVDKLQQK 635
D + ++ R SER+ K E+R+ H D+L+++
Sbjct: 180 DDLRSSVDDDYYDYPRYSERKSLNSKRHVDNYNENRRRHYDSYSSYDELERR 231
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +3
Query: 408 EAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELTFQAEEDR 587
+AE N K K+ + L Q+ ++ ++EL ++ + K +RK R + +T +E+
Sbjct: 86 DAEDNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEKFKKMRKKPAR-RIVTIANDEEE 144
Query: 588 KNHERMQD 611
++ + M +
Sbjct: 145 EDDQTMDE 152
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 8.6
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +3
Query: 321 RAEQDHAQTQEKLRKAL-----EQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELEN 485
RA ++ + QE+ + + EQQ +L++ EAE + +K ++ + E
Sbjct: 132 RAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETERANSETEQYEKQKEALEEEYE 191
Query: 486 ELDGEQRRHADAQKNLRKSERRIKELTFQAEE 581
EL E +H D Q + +E R + TF+ E
Sbjct: 192 ELRNECLKH-DPQLD---AEIRTLQDTFEEVE 219
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 9 RSREQLGISERRANALQNELEESRTLLEQADRARRQAEQ 125
R EQL E+ A ELE+ + LL A+ +R +Q
Sbjct: 260 RDEEQLFAGEKLTQAEIRELEKKKELLRIAEERQRLEKQ 298
>SPBC11B10.03 |cog8||Golgi transport complex subunit Cog8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 400
Score = 25.4 bits (53), Expect = 8.6
Identities = 22/88 (25%), Positives = 36/88 (40%)
Frame = +3
Query: 387 ELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRIKELT 566
EL+ R E A LK +QK +Q +R+ N L R + L S KEL
Sbjct: 47 ELEKRKAELHAQKLK----LVQKRQQLLRDNYNVLVDYARNQDAFYQLLENSRHDFKELV 102
Query: 567 FQAEEDRKNHERMQDLVDKLQQKIKTYK 650
+ + +R Q+ + + + + K
Sbjct: 103 LHTNQLYEPVKRSQNFLTSISEHYRDAK 130
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.4 bits (53), Expect = 8.6
Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +3
Query: 327 EQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELE---NELDG 497
E +HAQ + ++ ++L AE N L+ + A ++ + E NEL+
Sbjct: 481 EYEHAQQCMEAILIVDNSNTNALIKL--AEINELQDNRDAALEIVTNIFEQRRNINELER 538
Query: 498 EQRRHADAQKNL 533
EQ ++ D +KN+
Sbjct: 539 EQSQNEDHEKNV 550
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.121 0.384
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,689,465
Number of Sequences: 5004
Number of extensions: 19900
Number of successful extensions: 211
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 206
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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