Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L03
         (507 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   3.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   8.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 118 IQYQSHILHSTNVQFYMY 65
           +QY   ++ + N+ FYMY
Sbjct: 36  VQYPRIVVSTFNIVFYMY 53


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 281  FVRLNTKINHWLAQG 237
            F   N  IN+W+++G
Sbjct: 1616 FYNANFSINYWISEG 1630


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 260 FLCLDVQMRLLVIKYNSCKL 319
           +LC  VQ+++  IKY+  KL
Sbjct: 286 YLCDKVQLKIGEIKYSVNKL 305


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.6 bits (41), Expect = 8.4
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 99  FYTARTCNFICIYMTKQNN 43
           +YT   C  +CI+  K  N
Sbjct: 157 YYTYFLCVIVCIFRGKYRN 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,419
Number of Sequences: 336
Number of extensions: 1233
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)