Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_L02
(675 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2A9.05c |||DUF846 family protein|Schizosaccharomyces pombe|c... 107 2e-24
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 28 1.4
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 28 1.4
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 27 1.9
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 3.3
SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransfer... 26 5.7
SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.6
SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3 |Schizosacc... 25 7.6
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 25 7.6
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ... 25 10.0
SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 10.0
SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyc... 25 10.0
>SPBC2A9.05c |||DUF846 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 219
Score = 107 bits (256), Expect = 2e-24
Identities = 48/102 (47%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Frame = +1
Query: 367 HPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLVGLRW 546
HP +FF L+FR AI+ YIL +F+ SF+ F+++ LL+ D WTVKN+SGRLLVGLRW
Sbjct: 47 HPVALFFFLLFRTGAIVAYILGMFFTSSFMLLFIVIFTLLAVDLWTVKNVSGRLLVGLRW 106
Query: 547 WNYVDDNGKSHWVFEARQSRVNRN--ESRLFWMGLTLCPLVW 666
N +G+S W+FE+ RN + + FW L L P +W
Sbjct: 107 RNETGVDGESIWIFESADPSRPRNAVDQKTFWYALYLYPFIW 148
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 125 CDLXNFQDYLLFLYNSICLTAVEIIDQYLSTYSD 226
CDL + ++LL+L NS +T +D + Y+D
Sbjct: 328 CDLYSLSNFLLYLENSCVITYDVSLDCSFNEYND 361
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 27.9 bits (59), Expect = 1.4
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 361 FVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLVGL 540
FV+P + F L CS ++ ++L G F F+A + I L + N S R
Sbjct: 358 FVYPLVQEFCLFLACSFVVSFLLHGSF---FLAVLSVDIRRLELQDFLDSNSSNR---NS 411
Query: 541 RWW 549
+WW
Sbjct: 412 KWW 414
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +1
Query: 373 YIVFFHLVFRCSAIIVYILCG-----WFSDSFIASFVLVILLLSADFWTVKNIS 519
Y+ F LV +A++V G W S I V +L+L A +W KNI+
Sbjct: 225 YLGSFLLVTGITALVVTFNMGGDAFPWVSPVIITLLVSSVLILFAFYWVEKNIA 278
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 182 LNILNYIGIVGNPENSXGHIQSKSLSNIKCII 87
L +L IGI +P+ S HI+ KSL + C I
Sbjct: 1145 LRMLQKIGISPDPDLSKKHIKLKSLIIVVCSI 1176
>SPAC10F6.12c |mam4||protein-S isoprenylcysteine O-methyltransferase
Mam4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 236
Score = 25.8 bits (54), Expect = 5.7
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 418 VYILCGWFSDSFIASFVLVILLLSADFWTVKNISGRLLVGLRWWNYVDDNGKSHWV 585
V+I+ G+ F A L LL +F+ G L W +++ +NGK++W+
Sbjct: 30 VWIIYGYSIGGFFAFLSLFHLL---EFYITARFQGSQL---SWDSFILNNGKAYWL 79
>SPAC17A2.10c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 361 FVHPYIVFFHLVFRCSAIIVYILCGWFSDSFIASFVLVI 477
F+HP+ +FRC + + L + S SF SF+ +
Sbjct: 101 FLHPFTGSELSLFRCLLLFFFFLLFFLSFSFSFSFLFFL 139
>SPCC1223.01 ||SPCC285.18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 732
Score = 25.4 bits (53), Expect = 7.6
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = -1
Query: 492 CRQQ*ND*YEACNE*VGEPPTQDVHNYRRASEHQVEEHYV 373
CR++ Y C++ G P Q NY H ++HY+
Sbjct: 264 CREKHERCY-ICDQVAGRPTHQYFKNYDSLERHFEKDHYI 302
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2
Query: 92 YT*YLRVIWIVCDLXNFQDYLLFLYNS 172
Y LR+I+ + D F+DYL F Y +
Sbjct: 813 YVMILRLIYGIVDQSAFEDYLRFYYGN 839
>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 846
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -2
Query: 512 FLTVQKSADSSRMTNTKLAMNESENHPH 429
FLT+Q+ DS ++T+ L+++ + H H
Sbjct: 369 FLTLQEVFDSLKLTSYDLSIDTLDMHAH 396
>SPCC757.11c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 471
Score = 25.0 bits (52), Expect = 10.0
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 355 KQFVHPYIVFFHLVFRCSAI 414
K+FV PY + + LVF S+I
Sbjct: 372 KEFVQPYFIIYTLVFFGSSI 391
>SPAC1F5.07c |hem14||protoporphyrinogen oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 25.0 bits (52), Expect = 10.0
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 481 LLSADFWTVKNISGRLLVGLRWWNYV 558
L S W KN+ GR+L+ W+N V
Sbjct: 441 LNSLKSWIEKNMGGRILLTGSWYNGV 466
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,824,370
Number of Sequences: 5004
Number of extensions: 58826
Number of successful extensions: 145
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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