Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_L02
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    29   0.13 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    29   0.13 
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    28   0.23 
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    28   0.23 
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   3.8  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   3.8  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   3.8  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   3.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.7  

>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -3

Query: 673 KWTRPRGTASGPSRT---GGSRSC*PGSDGPRTPSATCRCRPH 554
           +WT     +   SRT   G + SC   S  PRTP    RCR H
Sbjct: 6   RWTEAMSDSGYDSRTDGNGAASSC-NNSLNPRTPPNCARCRNH 47


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 29.1 bits (62), Expect = 0.13
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = -3

Query: 673 KWTRPRGTASGPSRT---GGSRSC*PGSDGPRTPSATCRCRPH 554
           +WT     +   SRT   G + SC   S  PRTP    RCR H
Sbjct: 6   RWTEAMSDSGYDSRTDGNGAASSC-NNSLNPRTPPNCARCRNH 47


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -3

Query: 673 KWTRPRGTASGPSRT---GGSRSC*PGSDGPRTPSATCRCRPH 554
           +W      +   SRT   G S SC   S  PRTP    RCR H
Sbjct: 6   RWAEAMSDSGYDSRTDGNGASSSC-NNSLNPRTPPNCARCRNH 47


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 28.3 bits (60), Expect = 0.23
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
 Frame = -3

Query: 673 KWTRPRGTASGPSRT---GGSRSC*PGSDGPRTPSATCRCRPH 554
           +W      +   SRT   G S SC   S  PRTP    RCR H
Sbjct: 6   RWAEAMSDSGYDSRTDGNGASSSC-NNSLNPRTPPNCARCRNH 47


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 527 NRPLIFLTVQKSADSSRMTNTKLAMNESENH 435
           +RP + +  Q   DSS  TNT+   +E ++H
Sbjct: 179 SRPAMNIEEQMKMDSSGGTNTETIGDEQQSH 209


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 527 NRPLIFLTVQKSADSSRMTNTKLAMNESENH 435
           +RP + +  Q   DSS  TNT+   +E ++H
Sbjct: 179 SRPAMNIEEQMKMDSSGGTNTETIGDEQQSH 209


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 527 NRPLIFLTVQKSADSSRMTNTKLAMNESENH 435
           +RP + +  Q   DSS  TNT+   +E ++H
Sbjct: 179 SRPAMNIEEQMKMDSSGGTNTETIGDEQQSH 209


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 527 NRPLIFLTVQKSADSSRMTNTKLAMNESENH 435
           +RP + +  Q   DSS  TNT+   +E ++H
Sbjct: 179 SRPAMNIEEQMKMDSSGGTNTETIGDEQQSH 209


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
 Frame = +3

Query: 534 WT*VVELCGRQRQVALGVRGPSEPGQQERE---PPVL 635
           WT VV  C  QRQ  L  +   +  QQ+ E   PP L
Sbjct: 420 WTTVVRSCPSQRQRQLQQQQQQQQQQQQGERYVPPQL 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,287
Number of Sequences: 2352
Number of extensions: 15594
Number of successful extensions: 34
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)