Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K24
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    99   2e-23
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   0.99 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   1.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   7.0  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   9.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   9.2  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score =   99 bits (238), Expect = 2e-23
 Identities = 50/122 (40%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
 Frame = +3

Query: 75  SVAAPQSPT----EPIPILKQESNIEPDGSYQYSYETGNGISAAERGALKNIGAEEPALE 242
           ++AAPQ P+    +   I  Q+  +  DG+Y  ++ET NGIS  E G  K +  E P + 
Sbjct: 12  TLAAPQRPSGGADKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVS 71

Query: 243 VEGQFQYPSEDGGTIQLSYIANENGFQPQGSHLPTPPPIPEVIQRALAYLATAPPQPENN 422
            +G   Y + DG  + ++Y+A+ENGFQ QGSH+PT PPIP  IQRAL + A  P + +  
Sbjct: 72  -QGSDSYTAPDGQQVSITYVADENGFQVQGSHIPTAPPIPPEIQRALEWNAAHPEEDDGG 130

Query: 423 RP 428
           +P
Sbjct: 131 QP 132


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage
          protein protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +3

Query: 36 MKTFVILFGLVAVSVAAP 89
          M+ F+IL  LVA+ V AP
Sbjct: 1  MRYFIILLALVALGVCAP 18


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 54  LFGLVAVSVAAPQSPTEPIPILKQESN 134
           +F LVA+S+    + T+PI   K ++N
Sbjct: 274 IFNLVAISIDRYIAVTQPIKYAKHKNN 300


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 256 SSTQAKTVVLSSCPTSPTRMASSLRDLIYP 345
           +S+ A T+VLS CP++   +   + D   P
Sbjct: 845 ASSTAATLVLSGCPSNMMELQVDIADSQQP 874


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 303 ANENGFQPQGSHLPTPPPIPEVIQ 374
           AN N +QP    +P PP    V Q
Sbjct: 752 ANVNLWQPLSVSIPPPPSAQNVPQ 775


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 39  KTFVILFGLVAVSVAAPQSPTEPIPILKQE 128
           KT  +L+ ++ +SVA     + P+P  K +
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVPAKKYD 408


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +3

Query: 6   GRWPSPTNTNMKTFVILFGLVAVSVAAPQSPTEPIPILKQESN 134
           G+W +  +   +  +   G   + ++A   P EP  I KQ+ +
Sbjct: 422 GKWFNSLDIRTEELIWARGTKDIPISACSLPCEPGMIKKQQGD 464


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +3

Query: 39  KTFVILFGLVAVSVAAPQSPTEPIPILKQE 128
           KT  +L+ ++ +SVA     + P+P  K +
Sbjct: 379 KTDRLLYSVLPISVANELRHSRPVPAKKYD 408


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/43 (23%), Positives = 20/43 (46%)
 Frame = +3

Query: 6   GRWPSPTNTNMKTFVILFGLVAVSVAAPQSPTEPIPILKQESN 134
           G+W +  +   +  +   G   + ++A   P EP  I KQ+ +
Sbjct: 512 GKWFNSLDIRTEELIWARGTKDIPISACSLPCEPGMIKKQQGD 554


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,822
Number of Sequences: 438
Number of extensions: 3955
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)