Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K20
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        25   0.66 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.2  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    23   3.5  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.7  

>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 181 ETPSGLKFVMNTDNQ 137
           ETPSG+  ++N DNQ
Sbjct: 472 ETPSGISSLLNLDNQ 486


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 610 KCTYWRNSLXSNXRHWYHVHKI 675
           +  YWR  +  N  HW H H +
Sbjct: 193 RVAYWREDIGLNLHHW-HWHLV 213


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 155 DEYRQPSTGRPRSPYVFPYXFCY 87
           +E ++  T +P  PYV  Y +CY
Sbjct: 238 NERKENLTCQPAVPYVPFYRYCY 260


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 519 LMYTSEQSMVENIPPQTAKLPPTI 448
           + Y  E S  E+IPP    +PP +
Sbjct: 183 MYYRDECSFAESIPPYLFFVPPPL 206


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 519 LMYTSEQSMVENIPPQTAKLPPTI 448
           + Y  E S  E+IPP    +PP +
Sbjct: 416 MYYRDECSFAESIPPYLFFVPPPL 439


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 519 LMYTSEQSMVENIPPQTAKLPPTI 448
           + Y  E S  E+IPP    +PP +
Sbjct: 416 MYYRDECSFAESIPPYLFFVPPPL 439


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 6/27 (22%)
 Frame = -3

Query: 631 NSSNKCTSCHCR------YTISCSQDT 569
           +S N CT+C C       +T+ C Q T
Sbjct: 688 SSDNPCTTCFCENGNNKCFTMECPQVT 714


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,194
Number of Sequences: 336
Number of extensions: 4460
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)