Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K20
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038611-6|AAB92039.1|  181|Caenorhabditis elegans Hypothetical ...   130   8e-31
U40800-15|AAA81499.1|  158|Caenorhabditis elegans Hypothetical p...    68   8e-12
Z49125-3|CAB97233.1|  213|Caenorhabditis elegans Hypothetical pr...    45   7e-05
AF125956-1|AAV28359.1|  472|Caenorhabditis elegans Hypothetical ...    44   1e-04
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    31   0.90 
AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical...    29   2.7  
AF077530-1|AAC26266.1|  441|Caenorhabditis elegans Hypothetical ...    29   3.6  
U53181-6|AAA93486.1|  224|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical ...    28   6.3  
AC006714-5|AAN84811.1|  224|Caenorhabditis elegans Hypothetical ...    28   6.3  

>AF038611-6|AAB92039.1|  181|Caenorhabditis elegans Hypothetical
           protein E04A4.5 protein.
          Length = 181

 Score =  130 bits (315), Expect = 8e-31
 Identities = 70/159 (44%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
 Frame = +2

Query: 269 MDEYTREPCPWRILDDSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 448
           M+EYTREPCP+RI DD             +F +  G++NA  G  +K++G +  V+ RS 
Sbjct: 1   MEEYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKG--KKLVGMMREVRMRST 58

Query: 449 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGVPAMAGSAXXXX 628
           + G  FA WGGMFSTIDC LV +R+KEDP NSI+SG LTG +LA R+G   MAGSA    
Sbjct: 59  LTGVQFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGS 118

Query: 629 XXXXXXXXXXXMFTRLTAEQFKPQQP---IFEDPSILGQ 736
                      + TR       P QP     +DP  LGQ
Sbjct: 119 VILAMIEGVGLVTTRWMGAMMDPTQPPPEALDDPRSLGQ 157


>U40800-15|AAA81499.1|  158|Caenorhabditis elegans Hypothetical
           protein D2096.1 protein.
          Length = 158

 Score = 67.7 bits (158), Expect = 8e-12
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +2

Query: 440 RSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARN 589
           RS + G  FA WGG+FSTIDC LV  R+KED  NSI+SG LTG +LA R+
Sbjct: 2   RSTLAGVQFAAWGGLFSTIDCCLVANRKKEDSINSIVSGGLTGALLAIRS 51


>Z49125-3|CAB97233.1|  213|Caenorhabditis elegans Hypothetical
           protein C47G2.3 protein.
          Length = 213

 Score = 44.8 bits (101), Expect = 7e-05
 Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +2

Query: 431 VKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGV-PAMA 607
           +  R    G NF   G MFS  +C+L  +R K D  N   SG + GG+L  R G+ PA+ 
Sbjct: 136 MSSRMKSYGKNFGSIGLMFSGTECALETIRAKSDWRNGTYSGGIVGGLLGLRAGIMPAVW 195

Query: 608 GSA 616
           G+A
Sbjct: 196 GAA 198


>AF125956-1|AAV28359.1|  472|Caenorhabditis elegans Hypothetical
           protein DC2.3b protein.
          Length = 472

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 19/47 (40%), Positives = 30/47 (63%)
 Frame = -3

Query: 253 KVQTLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLL 113
           ++ T D     ++YKTS Y +  LE+ + +K ++NTD  A G+RDLL
Sbjct: 51  RLATNDSNQTVNYYKTSAYKMTFLESATSIKIMLNTDPNATGIRDLL 97


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
           protein B0207.1 protein.
          Length = 564

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = -1

Query: 576 RIPPVRAPLIMEFHGSSFCLMYTSEQSMVENIPPQTAKLPPTIGERSFTAAKLPSI 409
           +IPP   P++ +           +   +   +PP T  LPPT+ E   T  K P +
Sbjct: 44  QIPPAPRPIVNQIQYPKPTNPVQNPNKLSTGLPPMTMMLPPTVQEPLPTPVKTPPL 99


>AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical
           protein Y56A3A.21 protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -3

Query: 256 FKVQTLDPKDGFSHYKT---SKYTLHCLETPSGLKFVMNTDNQ 137
           +   +    DGF HYKT   +++TL C   P  +++    + +
Sbjct: 24  YSASSFSTTDGFFHYKTTFITEFTLQCSNNPKNIQYTAEVNGR 66


>AF077530-1|AAC26266.1|  441|Caenorhabditis elegans Hypothetical
           protein C40D2.3 protein.
          Length = 441

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 80  FLNSKXCMEKHKEISDALCLVVCIHH-KLQP*GCLQAVKGVF*SFIMTKSIFRI*SLNFE 256
           F+N K   E++ + SD++C+   +   K Q   C   +      F+++ ++  I S+N  
Sbjct: 243 FINWKVMEEEYMD-SDSICVEAHVKICKTQELPC--NILSTHRKFVLSHTVRNISSINGG 299

Query: 257 N*YIMDEYTREPCPWRI 307
           N Y  D  TR   PW++
Sbjct: 300 NVYFTDIETRFNVPWKL 316


>U53181-6|AAA93486.1|  224|Caenorhabditis elegans Hypothetical
           protein F36D4.2 protein.
          Length = 224

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
 Frame = -3

Query: 331 KRTARVIKDTPRAWFSCIFIHDILIFKVQTLDP---KDGFSHYKTSKYTLHCLETPSGLK 161
           K  A  +    +   S +F H +    VQ L P     G    +T+++ L CL++ +G+K
Sbjct: 102 KFAAPTVSTNEKIILSSMF-HSLFTIAVQ-LSPCQKSSGVEVLETTQFKLFCLQSRTGVK 159

Query: 160 FVMNTDNQAQGVRDLLM 110
           FV+ T   +    D L+
Sbjct: 160 FVVITSAASNIAADSLL 176


>AC006714-6|AAN84810.2|  339|Caenorhabditis elegans Hypothetical
           protein Y119D3B.12a protein.
          Length = 339

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 331 YNGSDRWWTISFDKRFQKRTTRL 399
           Y  SD+ W + F+KRF +R  R+
Sbjct: 71  YKNSDKKWRMGFEKRFLERIRRI 93


>AC006714-5|AAN84811.1|  224|Caenorhabditis elegans Hypothetical
           protein Y119D3B.12b protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 331 YNGSDRWWTISFDKRFQKRTTRL 399
           Y  SD+ W + F+KRF +R  R+
Sbjct: 71  YKNSDKKWRMGFEKRFLERIRRI 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,918,253
Number of Sequences: 27780
Number of extensions: 396623
Number of successful extensions: 905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)