Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_K19
(815 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831 59 4e-09
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701... 54 1e-07
06_03_0907 - 25851673-25852368,25853531-25853585,25853973-258540... 50 3e-06
03_02_0040 + 5221015-5221322,5221423-5222254 45 6e-05
02_01_0595 + 4420112-4420401,4420518-4420607,4421883-4421931,442... 44 1e-04
06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781 44 1e-04
08_02_1583 + 28036125-28037030,28037411-28037656 31 1.1
07_03_0068 - 13021090-13021197,13021319-13021354,13022245-130223... 31 1.1
04_04_0909 - 29312875-29313135,29313235-29313556,29313676-293139... 31 1.1
12_02_0585 + 20824752-20825954,20826141-20826329,20826533-208266... 29 4.4
07_03_1651 - 28395369-28395436,28395524-28395575,28395857-283960... 29 4.4
02_01_0084 - 573638-574305,574705-574900,574997-577246,578053-57... 29 5.8
12_02_0189 + 15165485-15168694 28 7.7
10_08_0757 + 20367348-20367560,20367657-20367904,20371406-203717... 28 7.7
05_03_0660 + 16724361-16724684,16725085-16725300 28 7.7
03_01_0154 - 1223879-1224274,1224391-1224585 28 7.7
02_04_0515 + 23582105-23583519,23583613-23583741,23583835-235839... 28 7.7
01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320 28 7.7
>12_02_0500 + 19735879-19736144,19736325-19736664,19738181-19738831
Length = 418
Score = 59.3 bits (137), Expect = 4e-09
Identities = 25/58 (43%), Positives = 37/58 (63%)
Frame = +1
Query: 607 FRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAIY 780
+ LP WL+DN+++H +R P SIF IH ET N+WTHL+G + F+ +AI+
Sbjct: 47 YEELPEWLKDNEFIHGYYRCEWP-MKETILSIFSIHNETLNVWTHLIGFLLFLCLAIF 103
>03_02_0270 -
7011363-7012302,7013237-7013640,7014264-7014333,
7014835-7015331,7015959-7016283,7018060-7018292
Length = 822
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/95 (30%), Positives = 51/95 (53%)
Frame = +1
Query: 496 AGVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLP 675
A +E++ A A ++ +E +R+ + + +R LP +++DN+Y+ + +R P
Sbjct: 2 AAAAGEEVEAARWAE-AEDERKEGLRR--RRRYGLVEYRALPGYMRDNEYILRHYRCEWP 58
Query: 676 SFSACFASIFRIHTETGNIWTHLLGCVAFIGVAIY 780
S F IH ET N+WTHL+G F+ + IY
Sbjct: 59 -LPQVLLSAFSIHNETLNVWTHLIGFFIFLVLTIY 92
>06_03_0907 -
25851673-25852368,25853531-25853585,25853973-25854068,
25854170-25854435
Length = 370
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/57 (38%), Positives = 35/57 (61%)
Frame = +1
Query: 607 FRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAI 777
+ LP ++++N+++ +R P +A S+F H ET NIWTHLLG V F G+ +
Sbjct: 47 YHELPDYMKENEFILDYYRSEWPILNALL-SLFSWHNETINIWTHLLGFVLFFGLTV 102
>03_02_0040 + 5221015-5221322,5221423-5222254
Length = 379
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +1
Query: 571 RKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLG 750
++ E + + + LP +L+ N+++ +R P A S F +H ET N+WTHL+G
Sbjct: 49 KRCCERKYELVSYDALPAFLKHNEFIIDYYRSEWPIKQALL-SAFAVHNETVNVWTHLIG 107
Query: 751 CVAFIGVAI 777
F+ + +
Sbjct: 108 FFMFLALTV 116
>02_01_0595 +
4420112-4420401,4420518-4420607,4421883-4421931,
4423337-4424020
Length = 370
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 544 AAEQAEEFVRKVWEASWNVCHFRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTET 723
AAE A E R++ + + LP +L+DN+++ +R P A S F H ET
Sbjct: 39 AAEAAAERGRRL-----RLVGYDELPDFLRDNEFIRGYYRAEWPLRDAAL-SAFSWHNET 92
Query: 724 GNIWTHLLGCVAFIGVAI 777
N+WTHL G + F+ +A+
Sbjct: 93 LNVWTHLGGFLLFLALAL 110
>06_03_0958 - 26310106-26310783,26312176-26312332,26312447-26312781
Length = 389
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 607 FRHLPRWLQDNDYLHKGHRPPLPSFSACFASIFRIHTETGNIWTHLLGCVAFIGVAI 777
F LP +L+DN+++ +GH S S F H ET N+WTHL G F+ +A+
Sbjct: 70 FEELPDYLKDNEFI-RGHYRCEWSVRDALRSAFAWHNETLNVWTHLGGFFLFLWLAV 125
>08_02_1583 + 28036125-28037030,28037411-28037656
Length = 383
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 479 WLKF*KLACYPMRLIWEHWPITP 547
W F KLAC P+ + E WP +P
Sbjct: 169 WRDFLKLACMPLAAVVESWPTSP 191
>07_03_0068 -
13021090-13021197,13021319-13021354,13022245-13022322,
13022412-13022514,13022732-13022817,13023036-13023090,
13023186-13023250,13023997-13024086,13024415-13024530,
13024701-13024710
Length = 248
Score = 31.1 bits (67), Expect = 1.1
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = -1
Query: 293 SHIFACFNHAKMGNWQPLAAVTFVSGTRTVIRKSKVQL 180
+H+ C + GNW+ + + F+ G + V K K+Q+
Sbjct: 139 AHLQLCIESSSNGNWRSIWTLEFIDGLQLVEIKGKIQV 176
>04_04_0909 -
29312875-29313135,29313235-29313556,29313676-29313923,
29314032-29314259
Length = 352
Score = 31.1 bits (67), Expect = 1.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 479 WLKF*KLACYPMRLIWEHWPITPPN 553
W F +L CYP+ + WP PP+
Sbjct: 133 WRDFLRLHCYPLESFIDQWPSNPPS 157
>12_02_0585 +
20824752-20825954,20826141-20826329,20826533-20826690,
20826913-20827009,20827368-20827730,20829225-20829303,
20830180-20830286
Length = 731
Score = 29.1 bits (62), Expect = 4.4
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +3
Query: 204 NCSCTANKGHGGQWLPISHLRVIE 275
+C C +KG + +P+ HLR+++
Sbjct: 557 DCKCEQHKGWSNEMIPLDHLRMVD 580
>07_03_1651 -
28395369-28395436,28395524-28395575,28395857-28396092,
28396362-28396419,28396509-28396577,28396686-28396791,
28397104-28397171,28397266-28397385,28398144-28398231,
28399433-28399534,28399699-28399757,28399866-28400003,
28400222-28400473,28400508-28400593,28401061-28401165,
28402351-28402516
Length = 590
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -1
Query: 326 DTLWDPISDSTSHIFACFNHAKMGNWQPLAAVTFVSGTRTVIRKSKVQL-RHKKFTPN 156
DT++DP++ S HI+ C+ + A+VT V G ++ RKSK L R PN
Sbjct: 204 DTVFDPVALSCGHIY-CYLCSCSA-----ASVTIVDGLKSAERKSKCPLCRQAGVFPN 255
>02_01_0084 -
573638-574305,574705-574900,574997-577246,578053-579174,
579266-579370,579975-580028,580244-580344,580454-581423,
582030-582203,582341-582643,582719-582856,582993-583247,
584230-584370,585008-585289,585395-585540,585627-585690,
585723-585799,586285-586301,587728-587867,587972-588029,
588121-588218,588727-588776,589260-589743
Length = 2630
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 499 GVLSDEIDLGALAHNAAEQAEEFVRKVWEASWNVCHFRHL 618
G L+ D G + AA++A F+ VW WN+C R L
Sbjct: 274 GDLNRVCDSGPVMEKAAKEATMFL--VWIIGWNICLLRLL 311
>12_02_0189 + 15165485-15168694
Length = 1069
Score = 28.3 bits (60), Expect = 7.7
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 319 SVSSDGLRRRQGWDPD 366
+V S GLRRR WDPD
Sbjct: 767 TVDSVGLRRRTAWDPD 782
>10_08_0757 +
20367348-20367560,20367657-20367904,20371406-20371730,
20372299-20372541
Length = 342
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 479 WLKF*KLACYPMRLIWEHWPITPPN 553
W + +L CYP+ WP PP+
Sbjct: 128 WRDYLRLHCYPLHQFVPDWPSNPPS 152
>05_03_0660 + 16724361-16724684,16725085-16725300
Length = 179
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = -2
Query: 637 CLAANVANV*NGTRSTTPPILCERILRPVRRRYGPVLPNQSHRITRQLSKLQPFRHPTDV 458
CL+ V+ + PP + RP R Y PV+ + +T+++ T
Sbjct: 33 CLSNVVSAAAKSPAAAPPPAVVLVHARPARPLYYPVIDGGGYVLTQEVMDSMDRYMATAA 92
Query: 457 DPPVLKAADI 428
D V KA DI
Sbjct: 93 DSVVAKARDI 102
>03_01_0154 - 1223879-1224274,1224391-1224585
Length = 196
Score = 28.3 bits (60), Expect = 7.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 479 WLKF*KLACYPMRLIWEHWPITPPN 553
W + +L CYP+ WP PP+
Sbjct: 122 WRDYLRLHCYPLHRYLPDWPSNPPS 146
>02_04_0515 +
23582105-23583519,23583613-23583741,23583835-23583970,
23584051-23584139,23584236-23584347,23584427-23584533,
23584630-23584723
Length = 693
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 812 HLISID--GRDXK*IATPMNATQPRRCVQMLPVSVWIRKIDAKHALNEGRGG 663
HL+ D G D + TP PRRC+ ML + + + + +NEG G
Sbjct: 311 HLLDSDFEGEDCR-SETPECTRSPRRCINMLQGCRSVDEFERLNTINEGTYG 361
>01_02_0095 - 11076493-11077644,11077845-11077918,11078155-11078320
Length = 463
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +1
Query: 496 AGVLSDEIDLGALAHNAAEQAEEFVRKVWE---ASWNVCHFR-HLPRWL 630
AG L DE +LGA E+ + R +W+ WN H L W+
Sbjct: 37 AGELGDEGELGARRARRGEEVQRRFRLLWKFRCVKWNFSHMEVQLMDWM 85
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,756,142
Number of Sequences: 37544
Number of extensions: 495849
Number of successful extensions: 1318
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1317
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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