Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K19
         (815 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           25   2.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     25   2.1  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   2.8  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   4.9  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    24   4.9  

>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 783 KVDRDANECHAAKEMRPNVTC 721
           K DR+  E H  K+   NVTC
Sbjct: 163 KADREVYESHRCKDEAGNVTC 183


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 783 KVDRDANECHAAKEMRPNVTC 721
           K DR+  E H  K+   NVTC
Sbjct: 164 KADREVYESHRCKDEAGNVTC 184


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +2

Query: 548 PNRPKNSFAKYGRRRGTCAISDI 616
           P+ P+ S A+YG RRG   IS I
Sbjct: 537 PDSPQLSDAQYGFRRGRSTISAI 559


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 508 ITRQLSKLQPFRHPTDVDPPVLKA 437
           I + L +LQP R   D DP VLK+
Sbjct: 363 IRKVLYRLQPSRTAQDRDPVVLKS 386


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 548 PNRPKNSFAKYGRRRGTCAISDICHV 625
           P+ P+ S A+YG RRG    S I  V
Sbjct: 532 PDSPRLSDAQYGFRRGRSTFSAIQRV 557


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 879,151
Number of Sequences: 2352
Number of extensions: 18851
Number of successful extensions: 42
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)