Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_K15
(811 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.34
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 29 0.59
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 29 0.78
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.78
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 1.0
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 29 1.0
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 28 1.4
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 28 1.4
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 28 1.8
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 27 2.4
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 27 2.4
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 3.2
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 27 4.2
SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces pombe... 26 7.3
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 26 7.3
SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces pom... 26 7.3
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 7.3
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 26 7.3
SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces ... 25 9.6
SPBC31F10.04c |srb4|med17|mediator complex subunit Srb4|Schizosa... 25 9.6
SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr 3|||... 25 9.6
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 30.3 bits (65), Expect = 0.34
Identities = 39/232 (16%), Positives = 87/232 (37%), Gaps = 10/232 (4%)
Frame = +1
Query: 22 RCAY-EEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKAR-KRXXXXXXXXXX 195
+CA EE + LE ++ N +D + I + I E + + +R
Sbjct: 289 KCAINEEDSKLLEELKHNVANYSDAIVHKDKLIEDLSTRISEFDNLKSERDTLSIKNEKL 348
Query: 196 XXXXXXXXXXXXXNKVLRAQLELSQVR-QEIDRRIQEKEEEFENTRKNHQRALDSMQXXX 372
++ +QLE V +E +R I + + E+ + ++ S++
Sbjct: 349 EKLLRNTIGSLKDSRTSNSQLEEEMVELKESNRTIHSQLTDAESKLSSFEQENKSLKGSI 408
Query: 373 XXXXXXXXXXXRMKKKLEADINELEIALDHANKANAE-------AQKNIKRYQAQIKDLQ 531
+M K++ + + E +L HA AE K IK ++ +DL+
Sbjct: 409 DEYQNNLSSKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLR 468
Query: 532 TALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRARRQAEQEL 687
L + ++ N L+ +++E + + E + + ++++
Sbjct: 469 ACLNSSSNELKEKSALIDKKDQELNNLREQIKEQKKVSESTQSSLQSLQRDI 520
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 29.5 bits (63), Expect = 0.59
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
Frame = +1
Query: 415 KKLEADINELEIALDHANKANAEAQKN-IKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 591
KKLE D+N L L+ N A+ E+ KN I+ + K L L L
Sbjct: 753 KKLENDLNLLTEKLNKKN-ADTESFKNTIREAELSKKALNDNLGNKENIISDLKNKLSEE 811
Query: 592 ERRANALQNELEESRTLLEQADRARRQAEQEL 687
R LQ++L + + +E + A EL
Sbjct: 812 STRLQELQSQLNQDKNQIETLNERISAAADEL 843
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 29.1 bits (62), Expect = 0.78
Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +1
Query: 439 ELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGI-SERRANALQ 615
E ++ L NAE++K+ R + +++DL ++L + SE+R N L+
Sbjct: 87 EEKLQLTETKCRNAESEKS--RVENELEDLTSSLFEEANRMVANARKETVASEKRVNQLK 144
Query: 616 NELEESRTLLEQADRARRQAE---QELXDAHE 702
+L ++ TLL + + + D+HE
Sbjct: 145 KQLVDAETLLSSTQHQLTELKDVMHSMSDSHE 176
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.78
Identities = 45/236 (19%), Positives = 90/236 (38%), Gaps = 14/236 (5%)
Frame = +1
Query: 31 YEEGQEQLEAVRRENKNLADEVKDLL--DQIGEGGRNIHEIEKAR---KRXXXXXXXXXX 195
YE G E E + +++ ++ DL+ +Q E GR + +I AR +R
Sbjct: 506 YESGLEYDEDEEEDEEDVDEDELDLMTDEQRMEEGRRMFQIFAARLFEQRVLQAYREKVA 565
Query: 196 XXXXXXXXXXXXXNKVLRAQLELSQVRQEIDRRIQEKE----EEFENTRKNHQR-----A 348
+ + EL ++R++ +R ++K+ +E E R+ +R A
Sbjct: 566 QQRQAKLLEEIEEENKRKQERELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAA 625
Query: 349 LDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 528
+++ R+K++ E ELE + E +K +K+ Q +
Sbjct: 626 QKALEAKRQEEARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADRE 685
Query: 529 QTALXXXXXXXXXXXXXLGISERRANALQNELEESRTLLEQADRARRQAEQELXDA 696
+ A + ER+ ++ EE R E ++ + E+ L +A
Sbjct: 686 KMAREQRLREEEEKRI---LEERKRREKLDKEEEERRRRELLEKESEEKERRLREA 738
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.7 bits (61), Expect = 1.0
Identities = 26/124 (20%), Positives = 45/124 (36%)
Frame = +1
Query: 280 EIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEADINELEIALD 459
E + R+QE +E E R + L+ + + K+ + INELE +
Sbjct: 496 ETNIRLQEVTKELETLRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRIK 555
Query: 460 HANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQNELEESRT 639
+E I Y+ ++KD + L N LQ+ +E +
Sbjct: 556 SYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDNDLRRFHESINKLQDREKELTS 615
Query: 640 LLEQ 651
LE+
Sbjct: 616 NLEK 619
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 28.7 bits (61), Expect = 1.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 34 EEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKA 156
E ++ E ++ ENK L E K L +I + IH+++++
Sbjct: 188 ENFKDDYEKIKEENKRLYKERKSFLSKIEKSACEIHDLKES 228
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 46 EQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKAR 159
+++EA+ N+ L E+K L D+I E G + I+K++
Sbjct: 903 KEVEAININNEGLVTEIKTLQDKIMEIGGIRYRIQKSK 940
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +1
Query: 277 QEIDRRIQE-KEEEFENTRKNHQRALDSMQ 363
Q +DR +Q+ KE +NT++ HQ+ LD ++
Sbjct: 912 QTLDRLLQKVKEHSEDNTKEKHQQLLDLLE 941
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +1
Query: 253 QLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDS 357
+LEL+ +R+ ++ I EK+EE N K RAL++
Sbjct: 275 ELELTSIRERLESLILEKQEEI-NFWKQRCRALET 308
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 27.5 bits (58), Expect = 2.4
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 287 TDASKRRRKNSKTHARTTSVPSTP 358
TD S +RRK + R TSVP +P
Sbjct: 395 TDGSMKRRKRRQPSNRKTSVPRSP 418
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 734 PSLPPRGNSSPXCKPCTPTSTNFS 805
PSLPPR SS P TST+ S
Sbjct: 133 PSLPPRTKSSSQSSPMASTSTSKS 156
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.1 bits (57), Expect = 3.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 725 RALPSLPPRGNSSPXCKPCTPT 790
R+ P+LPP GN+S P PT
Sbjct: 398 RSAPALPPLGNASRTSTPPVPT 419
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 418 KLEADINELEIALDHANKANAEAQKNIKR 504
KL + + L LDH+N +AE + IKR
Sbjct: 430 KLGPEYSSLSAILDHSNNIHAEILETIKR 458
>SPCC830.08c |||Golgi membrane protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 182
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 506 TRHKSRICRPLSRRSSAPVTMPANSSASRSVA 601
T H RIC+ +SR+++AP P SS + + A
Sbjct: 146 TPHVIRICKSVSRQNAAPA--PTASSFAHTTA 175
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 41 ARNSSRLSAARTRTLPTKSRTSWTRSAKVAATSTKSRK 154
A N+ R+ +A LP+ S +SW ++T T S K
Sbjct: 190 AFNTIRILSAIPSPLPSSSTSSWADEPSPSSTETSSIK 227
>SPBC776.13 |cnd1||condensin subunit Cnd1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1158
Score = 25.8 bits (54), Expect = 7.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 236 TRSSVLSSNCLRSDRRSTDASKRRRKNSKTHARTTSV 346
T +S+ SSN L R ST+ K R+KN T++ +
Sbjct: 121 TVNSLSSSNQLSVIRSSTNTVKGRKKNPTTNSNWNGI 157
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 737 SLPPRGNSSPXCKPCTPTSTNFST 808
S+PP G SS P TPT ST
Sbjct: 120 SIPPTGGSSSLSTPITPTVPPTST 143
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 737 SLPPRGNSSPXCKPCTPTSTNFST 808
S+PP G SS P TPT ST
Sbjct: 177 SIPPTGGSSSLSTPITPTVPPTST 200
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 737 SLPPRGNSSPXCKPCTPTSTNFST 808
S+PP GNS+ P P ++ ST
Sbjct: 290 SIPPTGNSTTPVTPTVPPTSTSST 313
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 737 SLPPRGNSSPXCKPCTPTSTNFST 808
S+PP GNS+ P P ++ ST
Sbjct: 344 SIPPTGNSTTPVTPTVPPTSTSST 367
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 457 DHANKANAEAQKNIKRYQAQIKDLQTAL 540
D+ N + +A KN+K YQ + DLQ +L
Sbjct: 661 DYRN-SRLDAIKNVKTYQIKFSDLQESL 687
>SPAC10F6.06 |vip1||RNA-binding protein Vip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 9.6
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 28 AYEEGQEQLEAVRRENKNLAD 90
AYE+G+ QL + E + LAD
Sbjct: 202 AYEDGKNQLLGIHNEARRLAD 222
>SPBC31F10.04c |srb4|med17|mediator complex subunit
Srb4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 545
Score = 25.4 bits (53), Expect = 9.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -3
Query: 113 WSRRSLTSSARFLFSRR 63
W +SLTSS +FLF +
Sbjct: 175 WKEKSLTSSCKFLFEAK 191
>SPCC895.04c |ufe1||SNARE Ufe1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 9.6
Identities = 9/37 (24%), Positives = 24/37 (64%)
Frame = +1
Query: 43 QEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEK 153
Q+QL+ + +EN L E + ++++ + G+++ +I +
Sbjct: 214 QQQLQELEQENDVLLQEFEHTMERLRDTGKSLADITR 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.309 0.126 0.326
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,194,972
Number of Sequences: 5004
Number of extensions: 32126
Number of successful extensions: 156
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 156
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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