Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_K15
(811 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,311... 32 0.47
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 31 1.4
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342... 30 1.9
03_01_0192 - 1534013-1535147,1535249-1535370,1535497-1535556,153... 29 3.3
03_01_0027 - 250837-250877,250972-252909,253733-253805,254476-25... 29 3.3
01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411 29 3.3
08_02_1275 - 25792148-25792227,25792457-25792488,25792590-257926... 29 4.4
08_02_0415 + 16898549-16898644,16899406-16899678,16899916-168999... 29 5.8
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 29 5.8
05_04_0081 + 17759158-17760021 29 5.8
03_01_0245 + 1916718-1917443,1917534-1917719 29 5.8
12_01_1110 + 11756814-11757485,11757566-11757644,11757705-117579... 28 7.6
04_03_1046 + 21974577-21975126,21975620-21975894,21976120-219762... 28 7.6
>02_01_0425 - 3102629-3104692,3106505-3108546,3109918-3109989,
3110157-3111444
Length = 1821
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -3
Query: 128 PPSPIWSRRSLTSSARFLFSRRTASSCSW 42
PP+P RR +SS+ L SRRT +S SW
Sbjct: 1137 PPAPAQIRRRASSSSSSLASRRTVASPSW 1165
>01_06_0124 - 26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 30.7 bits (66), Expect = 1.4
Identities = 38/206 (18%), Positives = 73/206 (35%)
Frame = +1
Query: 49 QLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRXXXXXXXXXXXXXXXXXXXXX 228
+L+ + KNL ++++ +QI +N E+E A
Sbjct: 734 ELQQLEASFKNLGNDLEQKFEQISVMQKNNEELELANSNLQNELAMVQEQKNEAVASTVE 793
Query: 229 XXNKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXR 408
NK L + Q+I +QE E E + + L Q
Sbjct: 794 LGNK-------LEEQNQQIS-NLQEAVENLEAAKTDMYNELTVCQEEKNAALLQVQQLEA 845
Query: 409 MKKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGI 588
K LE+++ + + + +AN E ++ I + Q+++ ++ L G
Sbjct: 846 NLKNLESELEQKQSQVSALEQANEELREKISSLERQLEEARSKLQDEIIKLQ------GE 899
Query: 589 SERRANALQNELEESRTLLEQADRAR 666
ER + LQ +T E+ ++ R
Sbjct: 900 KERALDNLQQSNTSIKTFEEELEKQR 925
>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
26834330-26834732,26834840-26835118,26835285-26835716,
26836362-26836838,26837171-26837212,26837285-26837545,
26837637-26838938,26839146-26839575,26839643-26840046,
26840360-26840716,26840842-26841102,26841494-26842141,
26842231-26842452,26842547-26842768,26842860-26843009,
26843739-26844111,26844467-26844689,26845167-26845425,
26845585-26845920,26846013-26846999,26848395-26849624,
26849706-26849768,26849858-26849910,26849998-26850079,
26850520-26850588,26851070-26851129,26851205-26851267,
26851993-26852101,26852742-26852827,26853120-26853847,
26854613-26854676
Length = 3716
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/36 (33%), Positives = 27/36 (75%)
Frame = +1
Query: 13 SASRCAYEEGQEQLEAVRRENKNLADEVKDLLDQIG 120
+++ A++ ++ +EA+R ++ NLA+E++ LL +IG
Sbjct: 3159 TSAASAFDAAKDIMEALRSKHTNLANELEVLLSEIG 3194
>03_01_0192 -
1534013-1535147,1535249-1535370,1535497-1535556,
1535666-1535764,1535839-1535889,1535974-1536175,
1536709-1536911,1537264-1537350,1537435-1537589,
1537640-1537723,1538121-1538325,1538497-1538724
Length = 876
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 3/148 (2%)
Frame = +1
Query: 259 ELSQVRQEIDRRIQEKEEEFENTRKN---HQRALDSMQXXXXXXXXXXXXXXRMKKKLEA 429
+L + +EI ++ + E+TR+N ++ ++ + KLE
Sbjct: 386 KLQESEKEIRLLVETLRSKLEDTRENLVTSEKKARELEAQLQDEQLVSANNQKKSDKLEM 445
Query: 430 DINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANA 609
D+ +++ L+H A EA + + +I L + + E + A
Sbjct: 446 DLRKVKKELEHEKAAREEAWAKVSALELEIAATIRDLSIEKQRYQGARERIILRETQLRA 505
Query: 610 LQNELEESRTLLEQADRARRQAEQELXD 693
+ EE +L + + ++ L D
Sbjct: 506 FYSTTEEISSLFAKQQEQLKAMQRTLED 533
>03_01_0027 -
250837-250877,250972-252909,253733-253805,254476-254555,
255336-255595,255721-255785,256747-256839
Length = 849
Score = 29.5 bits (63), Expect = 3.3
Identities = 33/147 (22%), Positives = 56/147 (38%)
Frame = +1
Query: 259 ELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEADIN 438
E+ ++ EI + EK E + T+ N + A+ ++ + ++L +IN
Sbjct: 580 EVQRLTMEI-QMANEKLNELKQTKVNLENAVSELKKEVESLTEQNRSSELLIQELRDEIN 638
Query: 439 ELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQN 618
L D N E Q I+ ++ I L T + E + LQ
Sbjct: 639 SLT---DSRN----ELQNEIQSLRSTISQLNTEKDAALFQHQQSVERVSDLESQLLKLQP 691
Query: 619 ELEESRTLLEQADRARRQAEQELXDAH 699
ELEE ++ + Q QE +AH
Sbjct: 692 ELEEIEQKVQMLMQDLEQKRQEADNAH 718
>01_01_0639 + 4825703-4826155,4826344-4826559,4826683-4827411
Length = 465
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 45 GTARGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRESQE 161
G G + +E R + PP PDR+RW +R+S E
Sbjct: 13 GGGGGKKEQGREHGRTAAAPPPPDRKRWSFAKSSRDSTE 51
>08_02_1275 -
25792148-25792227,25792457-25792488,25792590-25792651,
25792721-25792801,25793086-25793241,25793292-25793348,
25793349-25793510,25793586-25793648,25793742-25793804,
25793895-25793948,25794334-25794390,25794479-25794547,
25795053-25795166,25795245-25795316,25795406-25795527,
25796416-25796617
Length = 481
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 451 ALDHANKANAEAQKNIKRYQAQIKDLQT-ALXXXXXXXXXXXXXLGISERRA--NALQNE 621
A + A KANA A + K+ KD++ ++ + E A +ALQ
Sbjct: 115 AEEQAGKANARAVELEKQIDKLKKDVEAQSVKKATLENRANDAEKRVQELNAKIDALQKT 174
Query: 622 LEESRTLLEQADRARRQAEQELXDAH 699
+E + L+ +RA + AE+EL H
Sbjct: 175 NDEQKRKLQSTERALKVAEEELMRLH 200
>08_02_0415 +
16898549-16898644,16899406-16899678,16899916-16899996,
16900094-16900369,16900414-16900932
Length = 414
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3
Query: 33 RRRPGTARGCPPREQEPCRRSQGPP 107
RRRP +R PPR E C + PP
Sbjct: 53 RRRPYPSRPYPPRAGEACNNADVPP 77
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 36 RRPGTARGCPPREQEPCRRSQGPPGPDRRRWPQ 134
R P RG PPR + P R + P P R R P+
Sbjct: 227 RSPARDRGSPPRRRSPPARRERSPAP-RSRSPR 258
>05_04_0081 + 17759158-17760021
Length = 287
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 500 NATRHKSRICRPL-SRRSSAPVTMPANSSASRSVAPMLFRTNW 625
N++ H S P +R+ APV + ++S +S RTNW
Sbjct: 134 NSSSHGSESSTPCPARQQEAPVNLESSSESSEDEVRRATRTNW 176
>03_01_0245 + 1916718-1917443,1917534-1917719
Length = 303
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 257 SNCLRSDRRSTDASKRRRKNSKTHARTTSVPSTPC 361
++C S D + R R ++ T ART P TPC
Sbjct: 67 TSCCGSGGGGGDNNLRGRSSTTTSARTPRTPKTPC 101
>12_01_1110 +
11756814-11757485,11757566-11757644,11757705-11757991,
11758072-11758131,11758311-11758976
Length = 587
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 43 QEQLEAVRRENKNLADEVKDLLDQIGEG--GRNIHEIEKARK 162
++ +E + N+ L EVK LDQ+ EG NI +E ARK
Sbjct: 469 RKDIETTIQANRQLVHEVKSKLDQLSEGPIKSNIDRLE-ARK 509
>04_03_1046 +
21974577-21975126,21975620-21975894,21976120-21976284,
21976352-21976441,21977723-21978097
Length = 484
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +1
Query: 235 NKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMK 414
N++ +A L + + + +++ E+E N R+ ++R +S + ++K
Sbjct: 388 NEMTKAILRSEEDIRRLRLSLEKAEQESNNAREENKRFRESEKASKEQEKQTEAEIQKLK 447
Query: 415 KKLEADINELEIAL----DHANKANAEAQK 492
+K+E D E E + D K E QK
Sbjct: 448 EKMEKDREEREEEIRRLRDDLEKEREERQK 477
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.309 0.126 0.326
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,624,670
Number of Sequences: 37544
Number of extensions: 296740
Number of successful extensions: 1269
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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