Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K15
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    35   0.003
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    31   0.032
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    29   0.17 
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    29   0.17 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    28   0.30 
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   2.8  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    24   6.4  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   8.4  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 34.7 bits (76), Expect = 0.003
 Identities = 21/92 (22%), Positives = 41/92 (44%)
 Frame = +1

Query: 412 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 591
           +++L+ ++NEL  A    ++   E  + + + Q  +K LQ  L             +   
Sbjct: 718 REQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEG 777

Query: 592 ERRANALQNELEESRTLLEQADRARRQAEQEL 687
           E     L+ ELE SRT+L +  +   + + +L
Sbjct: 778 ETEETTLREELEHSRTILAKLQKGIEEEQAKL 809


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 31.5 bits (68), Expect = 0.032
 Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
 Frame = +1

Query: 418 KLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTA---LXXXXXXXXXXXXXLGI 588
           +L+++IN+     ++  K  +E  + +KR +  I  ++T+   L             +G 
Sbjct: 416 RLDSEINKKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGT 475

Query: 589 SERRANALQNELEESRTLLEQA-----DRARRQAEQELXD 693
           S+ R + LQ+EL+  R  L  A     + ARR+ +QE+ +
Sbjct: 476 SKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVE 515


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 GPPCSARTVSGQTGDRQTHPREGGRI 317
           G P    T SG TG RQ HP   GR+
Sbjct: 112 GEPSRRWTRSGATGRRQPHPYRAGRV 137


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 240 GPPCSARTVSGQTGDRQTHPREGGRI 317
           G P    T SG TG RQ HP   GR+
Sbjct: 112 GEPSRRWTRSGATGRRQPHPYRAGRV 137


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 28.3 bits (60), Expect = 0.30
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +1

Query: 415 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDL 528
           + LEA + E + A D ++      QKN+ RY  QI ++
Sbjct: 853 RALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEI 890


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 51  ARGCPPREQEPCRRSQGPPGPDRR 122
           A G P  +++   R + PP PDRR
Sbjct: 131 AEGAPKPQRKLSDRGEPPPKPDRR 154


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 54  RGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRESQE 161
           R  PP     C R++      RRR   + R +++ E
Sbjct: 171 RNAPPERGHRCGRTESDNAKTRRRTRHNTRTKKAAE 206


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 54  RGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRESQE 161
           R  PP     C R++      RRR   + R +++ E
Sbjct: 171 RNAPPERGHRCGRTESDNAKTRRRARHNTRTKKAAE 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.126    0.326 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,401
Number of Sequences: 2352
Number of extensions: 8745
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)