Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_K15
(811 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 39 0.005
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 33 0.30
At1g32190.1 68414.m03959 expressed protein 32 0.52
At5g07660.1 68418.m00877 structural maintenance of chromosomes (... 31 1.2
At5g25070.1 68418.m02971 expressed protein 30 1.6
At3g14180.1 68416.m01792 expressed protein similar to 6b-interac... 30 1.6
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha... 30 2.1
At2g17930.1 68415.m02076 FAT domain-containing protein / phospha... 29 3.7
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 29 4.8
At1g16610.2 68414.m01990 arginine/serine-rich protein, putative ... 29 4.8
At1g16610.1 68414.m01989 arginine/serine-rich protein, putative ... 29 4.8
At5g54650.2 68418.m06805 formin homology 2 domain-containing pro... 28 6.4
At5g54650.1 68418.m06804 formin homology 2 domain-containing pro... 28 6.4
At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family... 28 6.4
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 28 8.4
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +1
Query: 415 KKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQT---ALXXXXXXXXXXXXXLG 585
KKLEA+ ELE+ L + K + Q+ + + Q + +L+T L
Sbjct: 401 KKLEAENQELELLLGESGKQMEDLQRQLNKAQVNLSELETRRAEKLELTMCLNGTKKQLE 460
Query: 586 ISERRANALQNELEESRTLLEQADRARRQAEQELXDAH 699
S+ R + +L E +TLL A+ AE L A+
Sbjct: 461 TSQNRLKETERKLTELQTLLHLTKDAKEAAEDGLKAAN 498
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 32.7 bits (71), Expect = 0.30
Identities = 28/143 (19%), Positives = 56/143 (39%)
Frame = +1
Query: 250 AQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEA 429
A+ ELS++ +EI+ R + +EEE E RK + A + ++ +
Sbjct: 421 AEGELSKLMREIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAKRREEEETERKKR 480
Query: 430 DINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANA 609
+ E + + EA++ + + + ++ + A E R
Sbjct: 481 EEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRK 540
Query: 610 LQNELEESRTLLEQADRARRQAE 678
+ E+E R E+ +R RR+ E
Sbjct: 541 EREEVERKRR--EEQERKRREEE 561
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.9 bits (69), Expect = 0.52
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -1
Query: 418 SSSCATPQPCP*PRLRGKPAWSRGHAGGSCVCFRILPPSL-GC--VCRSP 278
S C CP PR KP+ S G G C CF+ P+L GC C+ P
Sbjct: 298 SGLCRPSCSCPKPRCP-KPSCSCGCGCGDCGCFKCSCPTLKGCFSCCKKP 346
>At5g07660.1 68418.m00877 structural maintenance of chromosomes
(SMC) family protein similar to SMC-like protein (MIM)
[Arabidopsis thaliana] GI:5880614; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain
Length = 1058
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/91 (20%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 412 KKKLEADINELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGIS 591
K++ E ++ LE + K + +K++ R + +++DL+ ++ ++
Sbjct: 662 KREAEMNLEGLESTMRRLKKQRTQLEKDLTRKELEMQDLKNSVASETKASPTS----SVN 717
Query: 592 ERRANAL--QNELEESRTLLEQADRARRQAE 678
E + Q E+EE +LLE+ + ++AE
Sbjct: 718 ELHLEIMKFQKEIEEKESLLEKLQDSLKEAE 748
>At5g25070.1 68418.m02971 expressed protein
Length = 736
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Frame = +1
Query: 421 LEADINELEIALDHAN--KANAEAQKNIKRYQA---QIKDLQTALXXXXXXXXXXXXXLG 585
LE D ++E +A KA E ++ IKR Q I + L
Sbjct: 599 LEKDKTQMETGKANAELEKAEHEIEETIKRLQEIEKLILSKEKELAISRFQRLRIDSGTA 658
Query: 586 ISERRANALQNELEESRTLLEQADRARRQAEQ 681
+ER A ++LEE+ LLE+A A +AE+
Sbjct: 659 KAERSAALELSDLEEANLLLEEAQEAESEAEK 690
>At3g14180.1 68416.m01792 expressed protein similar to
6b-interacting protein 1 (NtSIP1) [Nicotiana tabacum]
GI:18149189
Length = 443
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +1
Query: 244 LRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRAL 351
++ QLE+SQ++Q+ RR+ + ++RKN+ A+
Sbjct: 398 VKTQLEISQLKQQHGRRMGNTSNDHHHSRKNNINAI 433
>At4g36080.1 68417.m05136 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF00454: Phosphatidylinositol 3-
and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
Length = 3839
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 28 AYEEGQEQLEAVRRENKNLADEVKDLLDQIG 120
A++ ++ +EA+R ++ NLA E++ LL +IG
Sbjct: 3287 AFDAAKDVMEALRSKHNNLASELEVLLTEIG 3317
>At2g17930.1 68415.m02076 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF02259 FAT domain, PF00454
Phosphatidylinositol 3- and 4-kinase, PF02260: FATC
domain
Length = 3795
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 28 AYEEGQEQLEAVRRENKNLADEVKDLLDQIG 120
A++ ++ +EA+R ++ NLA E++ LL +IG
Sbjct: 3242 AFDAAKDIMEALRGKHNNLASELEVLLTEIG 3272
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 244 LRAQLELSQV-RQEIDRRIQEKEEEFENTRKNHQRAL 351
L QLEL + +QE+D+ +Q EEE E + +++L
Sbjct: 599 LERQLELIETHQQEVDKALQSMEEEAERIYNDERKSL 635
>At1g16610.2 68414.m01990 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 407
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 33 RRRPGTARGCPPREQEPCRRSQGPPG-PDRRRWPQHPRNR 149
RR P RG PR + P + PG P RRR PR R
Sbjct: 223 RRSPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRR 262
>At1g16610.1 68414.m01989 arginine/serine-rich protein, putative
(SR45) similar to arginine/serine-rich protein
GI:6601502 from [Arabidopsis thaliana]
Length = 414
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 33 RRRPGTARGCPPREQEPCRRSQGPPG-PDRRRWPQHPRNR 149
RR P RG PR + P + PG P RRR PR R
Sbjct: 230 RRSPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRR 269
>At5g54650.2 68418.m06805 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 30 LRRRPGTARGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRES 155
L +PG++ P P +RS+GPP P R P+ P R+S
Sbjct: 138 LATKPGSSPS--PSPSRPPKRSRGPPRPPTR--PKSPPPRKS 175
>At5g54650.1 68418.m06804 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 900
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +3
Query: 30 LRRRPGTARGCPPREQEPCRRSQGPPGPDRRRWPQHPRNRES 155
L +PG++ P P +RS+GPP P R P+ P R+S
Sbjct: 138 LATKPGSSPS--PSPSRPPKRSRGPPRPPTR--PKSPPPRKS 175
>At1g72790.1 68414.m08415 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 561
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 14 PPQGVPTKKARNSSRLSAARTRTLPTKSRTS 106
PP P + R SR S ++ R P +SRTS
Sbjct: 396 PPPPPPPPERRYESRASTSKLRKAPVESRTS 426
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 27.9 bits (59), Expect = 8.4
Identities = 29/148 (19%), Positives = 50/148 (33%)
Frame = +1
Query: 259 ELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQXXXXXXXXXXXXXXRMKKKLEADIN 438
+L + Q RIQE EE+ + K H + + + +
Sbjct: 73 DLELLLQTEKYRIQELEEQVSSLEKKH----GETEADSKGYLGQVAELQSTLEAFQVKSS 128
Query: 439 ELEIALDHANKANAEAQKNIKRYQAQIKDLQTALXXXXXXXXXXXXXLGISERRANALQN 618
LE AL+ A + E +N+ ++ K L+ + L N Q
Sbjct: 129 SLEAALNIATENEKELTENLNAVTSEKKKLEATVDEYSVKISESENLLESIRNELNVTQG 188
Query: 619 ELEESRTLLEQADRARRQAEQELXDAHE 702
+LE L+ A + ++L A E
Sbjct: 189 KLESIENDLKAAGLQESEVMEKLKSAEE 216
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.309 0.126 0.326
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,294,400
Number of Sequences: 28952
Number of extensions: 198637
Number of successful extensions: 839
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1843581600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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