Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K11
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical...    32   0.41 
U70845-6|AAB09099.2|  207|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z68320-3|CAA92707.3|  477|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    28   5.1  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    28   5.1  

>AC024776-19|AAK68480.2|  398|Caenorhabditis elegans Hypothetical
           protein Y41D4B.6 protein.
          Length = 398

 Score = 31.9 bits (69), Expect = 0.41
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +2

Query: 266 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKYWPKWEVRCKGQTLPD 430
           C +  KG KCD+PC+     D K D    + I         P +  R K  T  D
Sbjct: 122 CDKNWKGAKCDVPCQEKCTADTKIDNPLKVDIDYSIDLSKLPTFVQRLKETTHVD 176


>U70845-6|AAB09099.2|  207|Caenorhabditis elegans Hypothetical
           protein F22H10.1 protein.
          Length = 207

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 29  GRAFLFTLIVLSLYLANTQCKVYTRCKLTRDLLKNNFPRTFISNWVCLIE 178
           GR     L+ ++  L NT C ++ R  + RDL  +N   TF SN VC ++
Sbjct: 17  GRLSFNNLMRVAYTLGNTLCYIHDRGFIHRDLKADNVVVTF-SNEVCTLK 65


>Z68320-3|CAA92707.3|  477|Caenorhabditis elegans Hypothetical
           protein W07A12.6 protein.
          Length = 477

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -1

Query: 165 TQLLMNVLGKLFFNKSLVNLHLVYTLH 85
           T L+ ++LGKL FN  L+++ +VYT +
Sbjct: 398 TPLVFSILGKLTFNTYLLHMPVVYTFN 424


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 266 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKY---WPKWEVRCKGQTLPDIE 436
           C  G  G KC        +E + ++G C  +     G  Y   WP +E+   G T  DI+
Sbjct: 104 CPVGFTGAKCQYDA----NECMANNGGCEHECVNTIGTYYCRCWPGFELSGDGNTCSDID 159

Query: 437 KC 442
           +C
Sbjct: 160 EC 161


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +2

Query: 266 CKEGRKGGKCDIPCEALLDEDIKDDGVCAIKIFEQEGFKY---WPKWEVRCKGQTLPDIE 436
           C  G  G KC        +E + ++G C  +     G  Y   WP +E+   G T  DI+
Sbjct: 104 CPVGFTGAKCQYDA----NECMANNGGCEHECVNTIGTYYCRCWPGFELSGDGNTCSDID 159

Query: 437 KC 442
           +C
Sbjct: 160 EC 161


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,468,787
Number of Sequences: 27780
Number of extensions: 267290
Number of successful extensions: 750
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)