BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fcaL-P02_F_K04 (726 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 30 0.39 SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 27 2.7 SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 27 2.7 SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 27 2.7 SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom... 27 3.6 SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 26 4.8 SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 26 6.3 SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 26 6.3 SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 25 8.3 >SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||Manual Length = 3971 Score = 29.9 bits (64), Expect = 0.39 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ + N+ T + + + + S + N PI+SS VNS+T + S TL Sbjct: 3103 NSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTL 3162 Query: 662 SLETRFT 682 + T T Sbjct: 3163 NTSTPIT 3169 Score = 29.9 bits (64), Expect = 0.39 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S TL Sbjct: 3247 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTL 3306 Query: 662 SLETRFT 682 + T T Sbjct: 3307 NTSTPIT 3313 Score = 28.3 bits (60), Expect = 1.2 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 859 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 918 Query: 662 SLETRFT 682 + T T Sbjct: 919 NTSTPIT 925 Score = 28.3 bits (60), Expect = 1.2 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 1795 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 1854 Query: 662 SLETRFT 682 + T T Sbjct: 1855 NTSTPIT 1861 Score = 28.3 bits (60), Expect = 1.2 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ + NT T + + + + S N PI+SS VNS+T + S L Sbjct: 1987 NSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2046 Query: 662 SLETRFT 682 + T T Sbjct: 2047 NTSTPIT 2053 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S + N PI+SS VNS+T + S L Sbjct: 1903 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVL 1962 Query: 662 SLETRFT 682 + T T Sbjct: 1963 NSSTPIT 1969 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S + N PI+SS VNS+T + S L Sbjct: 2095 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVL 2154 Query: 662 SLETRFT 682 + T T Sbjct: 2155 NSSTPIT 2161 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 2251 NSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2310 Query: 662 SLETRFT 682 + T T Sbjct: 2311 NTSTPIT 2317 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S + N PI+SS VNS+T + S L Sbjct: 2407 NSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVL 2466 Query: 662 SLETRFT 682 + T T Sbjct: 2467 NSSTPIT 2473 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 2467 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2526 Query: 662 SLETRFT 682 + T T Sbjct: 2527 NSSTPIT 2533 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 2659 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2718 Query: 662 SLETRFT 682 + T T Sbjct: 2719 NTSTPIT 2725 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 2887 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2946 Query: 662 SLETRFT 682 + T T Sbjct: 2947 NTSTPIT 2953 Score = 27.9 bits (59), Expect = 1.6 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 2983 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 3042 Query: 662 SLETRFT 682 + T T Sbjct: 3043 NTSTPIT 3049 Score = 26.6 bits (56), Expect = 3.6 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 N+ P+ NT T + + + + S N PI+SS VNS+T + S L Sbjct: 2767 NTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2826 Query: 662 SLETRFT 682 + T T Sbjct: 2827 NSSTPIT 2833 Score = 26.6 bits (56), Expect = 3.6 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 N+ P+ + N+ T + + + + S + N PI+SS VNS+T + S L Sbjct: 3331 NTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTAL 3390 Query: 662 SLETRFT 682 + T T Sbjct: 3391 NTSTPIT 3397 Score = 26.6 bits (56), Expect = 3.6 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ N+ T + + + S + N PI+SS VNS+T + S L Sbjct: 3367 NSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTAL 3426 Query: 662 SLETRFT 682 + T T Sbjct: 3427 NTSTPIT 3433 Score = 25.8 bits (54), Expect = 6.3 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNGNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTLSLE 670 NS P+ NT T + S + N PI+SS G+N++T + S L+ Sbjct: 907 NSSTPITSSTALNTSTPIT---------SSSVLNSSTPITSSTGLNTSTPITSSSVLNSS 957 Query: 671 TRFT 682 T T Sbjct: 958 TPIT 961 Score = 25.8 bits (54), Expect = 6.3 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ NT + + + + S N PI+SS VNS+T + S L Sbjct: 1639 NSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 1698 Query: 662 SLETRFT 682 + T T Sbjct: 1699 NTSTPIT 1705 Score = 25.8 bits (54), Expect = 6.3 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ N+ T + + + + S N PI+SS VNS+T + S L Sbjct: 2515 NSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTAL 2574 Query: 662 SLETRFT 682 + T T Sbjct: 2575 NSSTPIT 2581 Score = 25.8 bits (54), Expect = 6.3 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ N+ T + + + + S N PI+SS VNS+T + S L Sbjct: 2563 NSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2622 Query: 662 SLETRFT 682 + T T Sbjct: 2623 NTSTPIT 2629 Score = 25.4 bits (53), Expect = 8.3 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 N+ P+ + N+ T + + + + S N PI+SS VNS+T + S L Sbjct: 451 NTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 510 Query: 662 SLETRFT 682 + T T Sbjct: 511 NTSTPIT 517 Score = 25.4 bits (53), Expect = 8.3 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = +2 Query: 485 PQNSVIPVCEQNPCNTDTLVQWNGNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTLS 664 P S V P + T+V + + S N PI+SS VNS+T + S L+ Sbjct: 1163 PITSSTVVNSSTPITSSTVVNTS---TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1219 Query: 665 LETRFT 682 T T Sbjct: 1220 TSTPIT 1225 Score = 25.4 bits (53), Expect = 8.3 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ N+ T + + + S N PI+SS VNS+T + S L Sbjct: 1339 NSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 1398 Query: 662 SLETRFT 682 + T T Sbjct: 1399 NSSTPIT 1405 Score = 25.4 bits (53), Expect = 8.3 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = +2 Query: 485 PQNSVIPVCEQNPCNTDTLVQWNGNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTLS 664 P S V P + T+V + + S N PI+SS VNS+T + S L+ Sbjct: 1475 PITSSTVVNSSTPITSSTVVNTS---TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1531 Query: 665 LETRFT 682 T T Sbjct: 1532 TSTPIT 1537 Score = 25.4 bits (53), Expect = 8.3 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 N+ P+ + N+ T + + + S N PI+SS VNS+T + S L Sbjct: 1699 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTAL 1758 Query: 662 SLETRFT 682 + T T Sbjct: 1759 NTSTPIT 1765 Score = 25.4 bits (53), Expect = 8.3 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Frame = +2 Query: 491 NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661 NS P+ N+ T + + + S N PI+SS VNS+T + S L Sbjct: 2179 NSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2238 Query: 662 SLETRFT 682 + T T Sbjct: 2239 NSSTPIT 2245 >SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosaccharomyces pombe|chr 1|||Manual Length = 618 Score = 27.1 bits (57), Expect = 2.7 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -1 Query: 393 QSQIQSSFWSPG*NNSLSGHLAGMNTGWRFSLFLKSGFSSISGNPI 256 Q + + S WS + GH +NT F L L F+ + N I Sbjct: 451 QEEAKKSLWSKRFSRFYYGHYVFVNTCHNFFLTLYQSFTEVDENSI 496 >SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2|||Manual Length = 497 Score = 27.1 bits (57), Expect = 2.7 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +2 Query: 572 GSVAPCNHLYPISSSLGVNSTTLVVSCVTLSLETRFTEVIGVL 700 G++ PC++ Y S N T + + +T SL +V+G L Sbjct: 332 GNIDPCSNEYGGLSPFQANETMALFNLITESLSQEQKKVVGFL 374 >SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for pyridoxine, pyridoxal, and pyridoxamine Bsu1|Schizosaccharomyces pombe|chr 1|||Manual Length = 526 Score = 27.1 bits (57), Expect = 2.7 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%) Frame = -1 Query: 366 SPG*NNSLSGHLAGMNTGWRFSL-FLKSGFSSISGNPIASFELFCAIDVTNNAHVRNIIF 190 SP NS+ G N W L +L + +SG+ +A+F L I T AHV I+F Sbjct: 416 SPIVGNSMVTVANGHN--WMCILNYLTDSYPLLSGSAVAAFTLPSFIGATVFAHVSQIMF 473 >SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 486 Score = 26.6 bits (56), Expect = 3.6 Identities = 10/26 (38%), Positives = 18/26 (69%) Frame = -1 Query: 303 SLFLKSGFSSISGNPIASFELFCAID 226 + F++SG S++ GN + ++EL ID Sbjct: 128 NFFVESGESTLEGNNVINYELAAGID 153 >SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr 3|||Manual Length = 570 Score = 26.2 bits (55), Expect = 4.8 Identities = 10/40 (25%), Positives = 23/40 (57%) Frame = -3 Query: 475 ILSDFTWSLSKSWPAFVCSWVI*VRWSAITNPVVFLVSRI 356 I+S W S+ P + +W++ + + P+++LV+R+ Sbjct: 469 IISPQLWQ-SRDAPRYYPAWIVQIVVAWFVTPIIYLVARV 507 >SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pombe|chr 1|||Manual Length = 781 Score = 25.8 bits (54), Expect = 6.3 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%) Frame = +2 Query: 215 LLVTSIAQNSSKDAIGFPEMEENPDLRNKENRQPVFIPARCPDNELFYPGDQKDDWICDC 394 + TS NS +I PE ++ +L+NK P + N+ P D I Sbjct: 149 MFTTSRRNNSISGSITIPESDQQINLQNKFLSTP---SIKNNANKSLSPQDSIS--IFGT 203 Query: 395 RPANLYHPGTDK--CW 436 P N Y TD CW Sbjct: 204 SPFNAYQQNTDNFVCW 219 >SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pombe|chr 1|||Manual Length = 427 Score = 25.8 bits (54), Expect = 6.3 Identities = 14/42 (33%), Positives = 23/42 (54%) Frame = -2 Query: 599 INDYKELQIPIFHNSHSIELMYPCCKGFARKPELLNFVEELD 474 + +Y E+ +P F+ +H I L P FA LLN+ + +D Sbjct: 62 LGNYPEV-LPYFNKAHQISLSQPRILAFA----LLNYAKNID 98 >SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizosaccharomyces pombe|chr 1|||Manual Length = 457 Score = 25.4 bits (53), Expect = 8.3 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +2 Query: 590 NHLYPISSSLGVNSTTLVVSCVTLSLETRFTEVIGVLCPPGSXRS 724 NH +S+ VNST L C+T + E VL P RS Sbjct: 282 NHFRNFDASMHVNSTGLEDLCLTFHTDKDHPEANQVLYTPIYARS 326 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,023,530 Number of Sequences: 5004 Number of extensions: 65640 Number of successful extensions: 229 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 157 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 222 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 341222980 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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