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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_K04
         (726 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||...    30   0.39 
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa...    27   2.7  
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2...    27   2.7  
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ...    27   2.7  
SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom...    27   3.6  
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|...    26   4.8  
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom...    26   6.3  
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom...    26   6.3  
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos...    25   8.3  

>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
            2|||Manual
          Length = 3971

 Score = 29.9 bits (64), Expect = 0.39
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+   +  N+ T +  +    +   + S +  N   PI+SS  VNS+T + S  TL
Sbjct: 3103 NSSTPITSSSVLNSSTAITSSSILNSSTPITSSSILNSSTPITSSTVVNSSTPITSSTTL 3162

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 3163 NTSTPIT 3169



 Score = 29.9 bits (64), Expect = 0.39
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S  TL
Sbjct: 3247 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTL 3306

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 3307 NTSTPIT 3313



 Score = 28.3 bits (60), Expect = 1.2
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 859  NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 918

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 919  NTSTPIT 925



 Score = 28.3 bits (60), Expect = 1.2
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 1795 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 1854

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 1855 NTSTPIT 1861



 Score = 28.3 bits (60), Expect = 1.2
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+   +  NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 1987 NSSTPITSSSVLNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2046

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2047 NTSTPIT 2053



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S +  N   PI+SS  VNS+T + S   L
Sbjct: 1903 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVL 1962

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 1963 NSSTPIT 1969



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S +  N   PI+SS  VNS+T + S   L
Sbjct: 2095 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVL 2154

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2155 NSSTPIT 2161



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2251 NSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2310

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2311 NTSTPIT 2317



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S +  N   PI+SS  VNS+T + S   L
Sbjct: 2407 NSSTPITSSTVVNTSTSITSSSVLNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSSVL 2466

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2467 NSSTPIT 2473



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2467 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2526

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2527 NSSTPIT 2533



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2659 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2718

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2719 NTSTPIT 2725



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2887 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2946

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2947 NTSTPIT 2953



 Score = 27.9 bits (59), Expect = 1.6
 Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2983 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 3042

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 3043 NTSTPIT 3049



 Score = 26.6 bits (56), Expect = 3.6
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            N+  P+      NT T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2767 NTSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2826

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2827 NSSTPIT 2833



 Score = 26.6 bits (56), Expect = 3.6
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            N+  P+   +  N+ T +  +    +   + S +  N   PI+SS  VNS+T + S   L
Sbjct: 3331 NTSTPITSSSVLNSSTAITSSSILNSSTPVTSSSVLNSSTPITSSTVVNSSTPITSSTAL 3390

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 3391 NTSTPIT 3397



 Score = 26.6 bits (56), Expect = 3.6
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      N+ T +  +        + S +  N   PI+SS  VNS+T + S   L
Sbjct: 3367 NSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTAL 3426

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 3427 NTSTPIT 3433



 Score = 25.8 bits (54), Expect = 6.3
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNGNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTLSLE 670
            NS  P+      NT T +          S +  N   PI+SS G+N++T + S   L+  
Sbjct: 907  NSSTPITSSTALNTSTPIT---------SSSVLNSSTPITSSTGLNTSTPITSSSVLNSS 957

Query: 671  TRFT 682
            T  T
Sbjct: 958  TPIT 961



 Score = 25.8 bits (54), Expect = 6.3
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      NT   +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 1639 NSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 1698

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 1699 NTSTPIT 1705



 Score = 25.8 bits (54), Expect = 6.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      N+ T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2515 NSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTAL 2574

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2575 NSSTPIT 2581



 Score = 25.8 bits (54), Expect = 6.3
 Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      N+ T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 2563 NSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 2622

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2623 NTSTPIT 2629



 Score = 25.4 bits (53), Expect = 8.3
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491 NSVIPVCEQNPCNTDTLVQWNG---NCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
           N+  P+   +  N+ T +  +    +   + S    N   PI+SS  VNS+T + S   L
Sbjct: 451 NTSTPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 510

Query: 662 SLETRFT 682
           +  T  T
Sbjct: 511 NTSTPIT 517



 Score = 25.4 bits (53), Expect = 8.3
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 485  PQNSVIPVCEQNPCNTDTLVQWNGNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTLS 664
            P  S   V    P  + T+V  +     + S    N   PI+SS  VNS+T + S   L+
Sbjct: 1163 PITSSTVVNSSTPITSSTVVNTS---TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1219

Query: 665  LETRFT 682
              T  T
Sbjct: 1220 TSTPIT 1225



 Score = 25.4 bits (53), Expect = 8.3
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      N+ T +  +        + S    N   PI+SS  VNS+T + S   L
Sbjct: 1339 NSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 1398

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 1399 NSSTPIT 1405



 Score = 25.4 bits (53), Expect = 8.3
 Identities = 20/66 (30%), Positives = 28/66 (42%)
 Frame = +2

Query: 485  PQNSVIPVCEQNPCNTDTLVQWNGNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTLS 664
            P  S   V    P  + T+V  +     + S    N   PI+SS  VNS+T + S   L+
Sbjct: 1475 PITSSTVVNSSTPITSSTVVNTS---TPITSSTVVNTSTPITSSTVVNSSTPITSSTVLN 1531

Query: 665  LETRFT 682
              T  T
Sbjct: 1532 TSTPIT 1537



 Score = 25.4 bits (53), Expect = 8.3
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            N+  P+   +  N+ T +  +        + S    N   PI+SS  VNS+T + S   L
Sbjct: 1699 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTAL 1758

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 1759 NTSTPIT 1765



 Score = 25.4 bits (53), Expect = 8.3
 Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +2

Query: 491  NSVIPVCEQNPCNTDTLVQWN---GNCEKLGSVAPCNHLYPISSSLGVNSTTLVVSCVTL 661
            NS  P+      N+ T +  +        + S    N   PI+SS  VNS+T + S   L
Sbjct: 2179 NSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVL 2238

Query: 662  SLETRFT 682
            +  T  T
Sbjct: 2239 NSSTPIT 2245


>SPAC806.08c |mod21||gamma tubulin complex subunit
           Mod21|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 618

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = -1

Query: 393 QSQIQSSFWSPG*NNSLSGHLAGMNTGWRFSLFLKSGFSSISGNPI 256
           Q + + S WS   +    GH   +NT   F L L   F+ +  N I
Sbjct: 451 QEEAKKSLWSKRFSRFYYGHYVFVNTCHNFFLTLYQSFTEVDENSI 496


>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 497

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 572 GSVAPCNHLYPISSSLGVNSTTLVVSCVTLSLETRFTEVIGVL 700
           G++ PC++ Y   S    N T  + + +T SL     +V+G L
Sbjct: 332 GNIDPCSNEYGGLSPFQANETMALFNLITESLSQEQKKVVGFL 374


>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
           pyridoxine, pyridoxal, and pyridoxamine
           Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 526

 Score = 27.1 bits (57), Expect = 2.7
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -1

Query: 366 SPG*NNSLSGHLAGMNTGWRFSL-FLKSGFSSISGNPIASFELFCAIDVTNNAHVRNIIF 190
           SP   NS+     G N  W   L +L   +  +SG+ +A+F L   I  T  AHV  I+F
Sbjct: 416 SPIVGNSMVTVANGHN--WMCILNYLTDSYPLLSGSAVAAFTLPSFIGATVFAHVSQIMF 473


>SPAC1F5.08c |yam8|ehs1|calcium transport
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 486

 Score = 26.6 bits (56), Expect = 3.6
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = -1

Query: 303 SLFLKSGFSSISGNPIASFELFCAID 226
           + F++SG S++ GN + ++EL   ID
Sbjct: 128 NFFVESGESTLEGNNVINYELAAGID 153


>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 570

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -3

Query: 475 ILSDFTWSLSKSWPAFVCSWVI*VRWSAITNPVVFLVSRI 356
           I+S   W  S+  P +  +W++ +  +    P+++LV+R+
Sbjct: 469 IISPQLWQ-SRDAPRYYPAWIVQIVVAWFVTPIIYLVARV 507


>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 781

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 2/76 (2%)
 Frame = +2

Query: 215 LLVTSIAQNSSKDAIGFPEMEENPDLRNKENRQPVFIPARCPDNELFYPGDQKDDWICDC 394
           +  TS   NS   +I  PE ++  +L+NK    P     +   N+   P D     I   
Sbjct: 149 MFTTSRRNNSISGSITIPESDQQINLQNKFLSTP---SIKNNANKSLSPQDSIS--IFGT 203

Query: 395 RPANLYHPGTDK--CW 436
            P N Y   TD   CW
Sbjct: 204 SPFNAYQQNTDNFVCW 219


>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 25.8 bits (54), Expect = 6.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 599 INDYKELQIPIFHNSHSIELMYPCCKGFARKPELLNFVEELD 474
           + +Y E+ +P F+ +H I L  P    FA    LLN+ + +D
Sbjct: 62  LGNYPEV-LPYFNKAHQISLSQPRILAFA----LLNYAKNID 98


>SPAC664.03 |||RNA polymerase II associated Paf1 complex
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 457

 Score = 25.4 bits (53), Expect = 8.3
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = +2

Query: 590 NHLYPISSSLGVNSTTLVVSCVTLSLETRFTEVIGVLCPPGSXRS 724
           NH     +S+ VNST L   C+T   +    E   VL  P   RS
Sbjct: 282 NHFRNFDASMHVNSTGLEDLCLTFHTDKDHPEANQVLYTPIYARS 326


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,023,530
Number of Sequences: 5004
Number of extensions: 65640
Number of successful extensions: 229
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 341222980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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