Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_K01
(780 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 266 1e-71
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 263 1e-70
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 263 1e-70
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 261 3e-70
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 261 4e-70
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 261 4e-70
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 260 1e-69
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 259 2e-69
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 258 2e-69
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 135 4e-32
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 135 4e-32
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 133 1e-31
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 132 3e-31
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 132 3e-31
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 129 2e-30
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 129 2e-30
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 110 9e-25
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 110 1e-24
At4g37190.1 68417.m05265 expressed protein 34 0.12
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.6
At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)... 29 4.6
At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)... 29 4.6
At1g21850.1 68414.m02735 multi-copper oxidase type I family prot... 28 8.0
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 266 bits (652), Expect = 1e-71
Identities = 115/133 (86%), Positives = 129/133 (96%), Gaps = 1/133 (0%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 267
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 448 VRKEAESCDCLQG 486
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
Score = 132 bits (319), Expect = 3e-31
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 731 TLKLSTPTYGDLNHLV 778
TLKLSTP++GDLNHL+
Sbjct: 215 TLKLSTPSFGDLNHLI 230
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (644), Expect = 1e-70
Identities = 114/132 (86%), Positives = 127/132 (96%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVV
Sbjct: 61 PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 131 bits (316), Expect = 6e-31
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKL+TP++GDLNHL+
Sbjct: 214 TLKLTTPSFGDLNHLI 229
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 263 bits (644), Expect = 1e-70
Identities = 116/133 (87%), Positives = 127/133 (95%), Gaps = 1/133 (0%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 267
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG Y GD+ DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 268 VPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV 447
VPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDV
Sbjct: 61 VPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDV 120
Query: 448 VRKEAESCDCLQG 486
VRKEAE+CDCLQG
Sbjct: 121 VRKEAENCDCLQG 133
Score = 132 bits (319), Expect = 3e-31
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 155 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 214
Query: 731 TLKLSTPTYGDLNHLV 778
TLKLSTP++GDLNHL+
Sbjct: 215 TLKLSTPSFGDLNHLI 230
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 261 bits (640), Expect = 3e-70
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 131 bits (316), Expect = 6e-31
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKL+ PT+GDLNHL+
Sbjct: 214 TLKLANPTFGDLNHLI 229
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (639), Expect = 4e-70
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 131 bits (316), Expect = 6e-31
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKL+TP++GDLNHL+
Sbjct: 214 TLKLTTPSFGDLNHLI 229
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 261 bits (639), Expect = 4e-70
Identities = 114/132 (86%), Positives = 125/132 (94%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 131 bits (316), Expect = 6e-31
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKL+TP++GDLNHL+
Sbjct: 214 TLKLTTPSFGDLNHLI 229
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 260 bits (636), Expect = 1e-69
Identities = 116/132 (87%), Positives = 125/132 (94%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+ DCLQG
Sbjct: 121 RKEAENSDCLQG 132
Score = 131 bits (316), Expect = 6e-31
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKL+ PT+GDLNHL+
Sbjct: 214 TLKLANPTFGDLNHLI 229
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 259 bits (634), Expect = 2e-69
Identities = 113/132 (85%), Positives = 126/132 (95%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 132 bits (320), Expect = 2e-31
Identities = 60/76 (78%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKLSTP++GDLNHL+
Sbjct: 214 TLKLSTPSFGDLNHLI 229
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 258 bits (633), Expect = 2e-69
Identities = 112/132 (84%), Positives = 125/132 (94%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 270
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 271 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 450
PRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 451 RKEAESCDCLQG 486
RKEAE+CDCLQG
Sbjct: 121 RKEAENCDCLQG 132
Score = 131 bits (316), Expect = 6e-31
Identities = 59/76 (77%), Positives = 66/76 (86%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
KIREEYPDR+M T+SV PSPKVSDTV PYNATLSVHQL EN DE +DNEALY ICFR
Sbjct: 154 KIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFR 213
Query: 731 TLKLSTPTYGDLNHLV 778
TLKL+TP++GDLNHL+
Sbjct: 214 TLKLTTPSFGDLNHLI 229
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 4e-32
Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 445 VVRKEAESCDCLQG 486
VRK A++C LQG
Sbjct: 121 RVRKLADNCTGLQG 134
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
++ +Y + +++ PSP+VS V PYN+ LS H L E+TD +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 731 TLKLSTPTYGDLNHLV 778
+L + PTY +LN L+
Sbjct: 216 SLDIERPTYTNLNRLI 231
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 4e-32
Identities = 62/134 (46%), Positives = 86/134 (64%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MREI+ I GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 445 VVRKEAESCDCLQG 486
VRK A++C LQG
Sbjct: 121 RVRKLADNCTGLQG 134
Score = 74.1 bits (174), Expect = 9e-14
Identities = 32/76 (42%), Positives = 48/76 (63%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
++ +Y + +++ PSP+VS V PYN+ LS H L E+TD +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRR 215
Query: 731 TLKLSTPTYGDLNHLV 778
+L + PTY +LN L+
Sbjct: 216 SLDIERPTYTNLNRLI 231
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 133 bits (321), Expect = 1e-31
Identities = 60/134 (44%), Positives = 87/134 (64%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MREI+ I GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 445 VVRKEAESCDCLQG 486
+RK A++C LQG
Sbjct: 121 RLRKLADNCTGLQG 134
Score = 74.5 bits (175), Expect = 7e-14
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = +2
Query: 590 YSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFRTLKLSTPTYGDLN 769
+++ PSP+VS V PYN+ LS H L E+TD +DNEA+Y IC R+L + PTY +LN
Sbjct: 169 FTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLN 228
Query: 770 HLV 778
L+
Sbjct: 229 RLI 231
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 132 bits (318), Expect = 3e-31
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 VVRKEAESCDCLQG 486
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
++ +Y + ++V PSP+VS +V PYN+ LS H L E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 731 TLKLSTPTYGDLNHLV 778
+L + PTY +LN LV
Sbjct: 216 SLNIERPTYTNLNRLV 231
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 132 bits (318), Expect = 3e-31
Identities = 61/134 (45%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 VVRKEAESCDCLQG 486
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
++ +Y + ++V PSP+VS +V PYN+ LS H L E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 731 TLKLSTPTYGDLNHLV 778
+L + PTY +LN LV
Sbjct: 216 SLNIERPTYTNLNRLV 231
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 2e-30
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 VVRKEAESCDCLQG 486
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
++ +Y + ++V PSP+VS +V PYN+ LS H L E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 731 TLKLSTPTYGDLNHLV 778
+L + PTY +LN LV
Sbjct: 216 SLSIERPTYTNLNRLV 231
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 129 bits (312), Expect = 2e-30
Identities = 60/134 (44%), Positives = 83/134 (61%), Gaps = 2/134 (1%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 264
MRE + I GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 265 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 444
+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 445 VVRKEAESCDCLQG 486
+RK A++C LQG
Sbjct: 121 RIRKLADNCTGLQG 134
Score = 76.2 bits (179), Expect = 2e-14
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +2
Query: 551 KIREEYPDRIMNTYSVVPSPKVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
++ +Y + ++V PSP+VS +V PYN+ LS H L E+TD + +DNEA+Y IC R
Sbjct: 156 RLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRR 215
Query: 731 TLKLSTPTYGDLNHLV 778
+L + PTY +LN LV
Sbjct: 216 SLSIERPTYTNLNRLV 231
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 110 bits (265), Expect = 9e-25
Identities = 49/133 (36%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 273
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 274 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 447
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 448 VRKEAESCDCLQG 486
+ +EA+ D L+G
Sbjct: 122 IDREADGSDSLEG 134
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 554 IREEYPDRIMNTYSVVPSP-KVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
+ + Y +++ TYSV P+ + SD V PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVE 216
Query: 731 TLKLSTPTYGDLNHLV 778
L L+ PT+ N LV
Sbjct: 217 RLHLTNPTFAQTNSLV 232
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 110 bits (264), Expect = 1e-24
Identities = 49/133 (36%), Positives = 82/133 (61%), Gaps = 2/133 (1%)
Frame = +1
Query: 94 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 273
REI+ +Q GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 274 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 447
RA+L+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D+
Sbjct: 63 RALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDM 121
Query: 448 VRKEAESCDCLQG 486
+ +EA+ D L+G
Sbjct: 122 IDREADGSDSLEG 134
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +2
Query: 554 IREEYPDRIMNTYSVVPSP-KVSDTVXXPYNATLSVHQLXENTDETYCIDNEALYXICFR 730
+ + Y +++ TYSV P+ + SD V PYN+ L++ +L N D +DN AL I
Sbjct: 157 LNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVE 216
Query: 731 TLKLSTPTYGDLNHLV 778
L L+ PT+ N LV
Sbjct: 217 RLHLTNPTFAQTNSLV 232
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 91 MREIVHIQAGQCGNQIGAKFWEIISDEHGI--DP-TGAYHGDSDLQLERINVYYNEASG- 258
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + G
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 259 GKYVPRAILVDLEP--GTMDS 315
Y PR + V+L+ GTM S
Sbjct: 61 ATYTPRLVSVNLKGALGTMSS 81
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 424 LVDSVLDVVRKEAESCDCLQ 483
+++SV VVRKEAE+C+CLQ
Sbjct: 1 MINSV-GVVRKEAENCNCLQ 19
>At1g09530.2 68414.m01069 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 396 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 229
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 228 ALQLQVRVPMVGTG 187
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g09530.1 68414.m01068 phytochrome interacting factor 3 (PIF3)
identical to phytochrome interacting factor 3 (PIF3)
GI:3929585 from [Arabidopsis thaliana]
Length = 524
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = -1
Query: 396 GPVVAGAGLSEDEVVRTEDLSERSRADRVHG--AGLQVDEDGAGHVLAAGGF--IVVYID 229
GP G G +LSER R DR++ LQ V A + Y+
Sbjct: 331 GPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVDKASMLDEAIEYLK 390
Query: 228 ALQLQVRVPMVGTG 187
+LQLQV++ + +G
Sbjct: 391 SLQLQVQIMSMASG 404
>At1g21850.1 68414.m02735 multi-copper oxidase type I family protein
similar to pollen-specific BP10 protein
[SP|Q00624][Brassica napus]; contains Pfam profile:
PF00394 Multicopper oxidase
Length = 551
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = -1
Query: 261 AAGGFIVVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSDLVAALTSLDMYDFPHFVL 82
AAGGF + I + + ++ VP G VL+GD DL A L + FP +L
Sbjct: 136 AAGGFGAIRISS-RPRIPVPFPAPAGDYTVLIGDWYKTNHKDLRAQLDNGGKLPFPDGIL 194
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,931,555
Number of Sequences: 28952
Number of extensions: 320855
Number of successful extensions: 946
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1746037600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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