Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_J24
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 380 e-106
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 375 e-104
SB_56| Best HMM Match : Actin (HMM E-Value=0) 374 e-104
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 373 e-104
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 350 5e-97
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 193 1e-49
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 1e-46
SB_54| Best HMM Match : Actin (HMM E-Value=0) 151 6e-37
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 136 1e-32
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 112 2e-25
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 99 2e-21
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 58 6e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 2e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 41 0.001
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 39 0.004
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.051
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.067
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.089
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.089
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 34 0.089
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.47
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.62
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.62
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.62
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.83
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.83
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.1
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.1
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.1
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.4
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 1.4
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.4
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.4
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.4
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.4
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 1.9
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 30 1.9
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.9
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 3.3
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.3
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.3
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 4.4
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 4.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 4.4
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 4.4
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 5.8
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 5.8
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 7.7
SB_20112| Best HMM Match : EGF (HMM E-Value=0) 28 7.7
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 7.7
SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12) 28 7.7
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 7.7
SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1) 28 7.7
SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4) 28 7.7
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 380 bits (935), Expect = e-106
Identities = 175/181 (96%), Positives = 180/181 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLD 653
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD 180
Query: 654 L 656
L
Sbjct: 181 L 181
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 375 bits (922), Expect = e-104
Identities = 173/181 (95%), Positives = 179/181 (98%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLD 653
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAI+RLD
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLD 180
Query: 654 L 656
L
Sbjct: 181 L 181
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 374 bits (920), Expect = e-104
Identities = 173/179 (96%), Positives = 178/179 (99%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDL
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 373 bits (917), Expect = e-104
Identities = 172/179 (96%), Positives = 178/179 (99%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDL
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL 180
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 350 bits (861), Expect = 5e-97
Identities = 160/167 (95%), Positives = 166/167 (99%)
Frame = +3
Query: 114 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 293
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 294 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 473
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 474 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 614
TQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIY 167
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 193 bits (470), Expect = 1e-49
Identities = 89/178 (50%), Positives = 122/178 (68%), Gaps = 3/178 (1%)
Frame = +3
Query: 132 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 305
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 306 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 482
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 483 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+Y G+ALPH RLD+
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDI 184
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 1e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +3
Query: 120 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 299
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 300 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 386
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 121 bits (291), Expect = 6e-28
Identities = 56/66 (84%), Positives = 62/66 (93%)
Frame = +3
Query: 459 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHA 638
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 639 ILRLDL 656
I+RLDL
Sbjct: 138 IIRLDL 143
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 151 bits (365), Expect = 6e-37
Identities = 68/97 (70%), Positives = 80/97 (82%)
Frame = +3
Query: 366 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 545
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 546 ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
ASGRTTG V D GDGVSHTVP+Y GY LPHA R+DL
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDL 2225
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 138 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 136 bits (329), Expect = 1e-32
Identities = 56/81 (69%), Positives = 74/81 (91%)
Frame = +3
Query: 414 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 593
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 594 SHTVPIYXGYALPHAILRLDL 656
SH+VPIY G+A+PH+I+R D+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDI 206
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 112 bits (270), Expect = 2e-25
Identities = 52/59 (88%), Positives = 55/59 (93%)
Frame = +3
Query: 480 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIY GYALPHAILRLDL
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDL 59
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 99 bits (238), Expect = 2e-21
Identities = 43/111 (38%), Positives = 72/111 (64%)
Frame = +3
Query: 324 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 503
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 504 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
PA ++ +VL+ +A+GR+ G+V+DSG + VP++ GY L AI+R L
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPL 113
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 123 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 239
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 58.0 bits (134), Expect = 6e-09
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 8/182 (4%)
Frame = +3
Query: 126 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 305
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 306 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 479
L Y P + G + NWD ++IW +TF E + M +
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDE 323
Query: 480 IMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAI 641
I+FE +N A+ A LS Y S +V+D+G +H VP++ G + A+
Sbjct: 324 ILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAV 383
Query: 642 LR 647
R
Sbjct: 384 RR 385
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +3
Query: 108 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 278
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 279 GDEAQSKRGILTL 317
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +3
Query: 525 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
Q LSLYASG T G+ L SG + IY G+ L H + L++
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEI 810
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +3
Query: 252 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 431
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.36
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 561 TGIVLDSGDGVSHTVPI 611
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 236 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 120
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +3
Query: 369 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 548
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 549 SGRTTGI----VLDSGDGVSHTVPIYXGYALP 632
+GI V D D + T Y LP
Sbjct: 572 YSAVSGIVEQRVTDGTDEIHSTDVNLAKYNLP 603
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +3
Query: 492 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYXGYALPHAILRLDL 656
++ T A+ + S RT TG V+DSGDGV+H +P+ GY + I + +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 93
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 642
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 484 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 645
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSC 573
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.7 bits (76), Expect = 0.067
Identities = 30/89 (33%), Positives = 37/89 (41%), Gaps = 2/89 (2%)
Frame = +1
Query: 382 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 561
PST S P + S C+ HST ++PS P + CT P P
Sbjct: 27 PSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCT-HSTPSAPSTPSTPSTPCT-PSTP 84
Query: 562 --PVSCWTPATVSPTPCPSTKDTHSPTPS 642
P + TP+T S PST T S TPS
Sbjct: 85 STPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 490 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 642
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.5 bits (63), Expect = 2.5
Identities = 30/91 (32%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +1
Query: 382 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCT--RPV 555
PST S S P +T S S ST ++PS P + T P
Sbjct: 114 PSTPSTPSTP-STPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPS 172
Query: 556 VP--PVSCWTPATVSPTPCPSTKDTHSPTPS 642
P P + TP+T+S PST T S TPS
Sbjct: 173 TPSAPGTPITPSTLSTPSTPSTPSTRS-TPS 202
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/88 (32%), Positives = 36/88 (40%)
Frame = +1
Query: 379 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 558
+P+T S S P +T S S ST ++PS P + CT P
Sbjct: 221 MPNTPSTPSTP-STPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCT-PNT 278
Query: 559 PPVSCWTPATVSPTPCPSTKDTHSPTPS 642
P TP+T S PST T S TPS
Sbjct: 279 PS----TPSTPSMPSTPSTPSTPS-TPS 301
Score = 29.1 bits (62), Expect = 3.3
Identities = 29/88 (32%), Positives = 36/88 (40%)
Frame = +1
Query: 379 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 558
+P+T S S P +T S S ST ++PS P + CT P
Sbjct: 771 MPNTPSTPSTP-STPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCT-PNT 828
Query: 559 PPVSCWTPATVSPTPCPSTKDTHSPTPS 642
P TP+T S PST T S TPS
Sbjct: 829 PS----TPSTPSMPSTPSTPSTPS-TPS 851
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 514 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 639
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 487 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 642
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.089
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 505 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 642
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.089
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 493 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 606
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 508 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 606
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 34.3 bits (75), Expect = 0.089
Identities = 21/88 (23%), Positives = 30/88 (34%)
Frame = +1
Query: 379 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 558
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 559 PPVSCWTPATVSPTPCPSTKDTHSPTPS 642
P + TP T + TP +P P+
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +1
Query: 508 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 633
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 484 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 606
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 508 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 606
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 642
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 499 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 642
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 642
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Frame = +1
Query: 382 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 561
P+T S +P + T + + T +P+KP P P
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTP 115
Query: 562 PVSCWTPATVSP-TPCPS--TKDTHSPT 636
+ TP +P TP P+ T H+PT
Sbjct: 116 TPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 499 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 642
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 496 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 642
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 600
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 502 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 630
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 315 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 467
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 456 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 182 CETGLAHT 159
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.83
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 182 CETGLAHT 159
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.83
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 182 CETGLAHT 159
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.83
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 182 CETGLAHT 159
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 182 CETGLAHT 159
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 182 CETGLAHT 159
CET L T
Sbjct: 288 CETQLVLT 295
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 493 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 639
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.1
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 601 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 449
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 448 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 284
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 514 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 618
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 182 CETGLAHT 159
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 440 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 532
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 493 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 642
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Frame = +1
Query: 382 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTS-PSKPCSR---CTR 549
P+T + P T + +T PP T+ P+KP + T
Sbjct: 98 PATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATT 157
Query: 550 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 642
P + PAT +PT +T + TP+
Sbjct: 158 TPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/87 (21%), Positives = 31/87 (35%)
Frame = +1
Query: 382 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 561
P+T + +PP T + +T P T+P+ T
Sbjct: 47 PTTPTTTTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTP-TTPTTTTPPATTTPTK 105
Query: 562 PVSCWTPATVSPTPCPSTKDTHSPTPS 642
P + PAT +PT +T + TP+
Sbjct: 106 PTTTTPPATTTPTKPTTTTPPGTTTPT 132
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.4
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 520 PSKPCSRCTRPVVPP 564
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -1
Query: 386 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 219
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 218 DRGEHGARSIISCETGLAHT 159
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 639
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/88 (22%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Frame = +1
Query: 385 STMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVPP 564
ST + PP + + + + +T P T+P R T P
Sbjct: 146 STTKYIPPPPSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPVTTTPRTTTPETTT 205
Query: 565 VSCWTPATVSP---TPCPSTKDTHSPTP 639
TP T +P TP +T +P P
Sbjct: 206 PETTTPRTTTPETTTPKKTTAAKKAPLP 233
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 508 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 606
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 508 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 612
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 293 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 159
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 490 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 639
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 182 CETGLAHT 159
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 359 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 183
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 182 CETGLAHT 159
CET L T
Sbjct: 61 CETQLVLT 68
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = -2
Query: 637 AWGSAYPX*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 458
+W P T W +PSP+ T P ++T+W + +S++ +I L
Sbjct: 101 SWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSLYHIIGRLS 160
Query: 457 ALGLR 443
+ R
Sbjct: 161 GVHYR 165
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -2
Query: 628 SAYPX*MGTVWETPSPESSTIPVVRPDAYSESTAW 524
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 4.4
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Frame = -1
Query: 299 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 135
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 134 GNFFVAHLE 108
G V L+
Sbjct: 521 GQVDVLLLD 529
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 444 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 572
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 502 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 639
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 514 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 651
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 544 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 648
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 490 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 642
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 517 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 639
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 595 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 422
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 421 G 419
G
Sbjct: 147 G 147
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 211 GNTARGASSPAKPALHIPEPLSTT 140
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 484 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 636
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 494 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLXRIRTP 631
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +2
Query: 449 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLXRIRT 628
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 629 PPRHP 643
P HP
Sbjct: 248 APDHP 252
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +1
Query: 487 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 618
S+ ST+ P T KP + RP+ P + P + P P T+
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTE 295
>SB_20112| Best HMM Match : EGF (HMM E-Value=0)
Length = 2112
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 490 KHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 645
KH T PP S + P P+S TP+ SP S+ +HS +C
Sbjct: 2062 KHHT-PPSAHSYGTSSYDSSPQKLPISYLTPSPESPKDWSSSPSSHSDWSNC 2112
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP 603
PP +P+ P T P VPP + P T P P
Sbjct: 227 PPTKAPTDPPVPPTNPPVPPTNPPAPPTNPPKP 259
>SB_3565| Best HMM Match : ASC (HMM E-Value=1.1e-12)
Length = 575
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 505 PPCTSPSKPCSRCTRPVVPPVSCWTP-ATVSPTPCPSTKDTHSPT 636
PP T+P P P + T AT PT P+T T PT
Sbjct: 1 PPVTTPVPTTESTAVPTTAPTTEQTTVATTIPTTIPTTVPTTEPT 45
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 526 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSC 645
K C R VPPVS +P PC P +C
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
>SB_38165| Best HMM Match : Drf_FH1 (HMM E-Value=1)
Length = 231
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 484 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPAT-VSPTPCPSTKDTHSPTPS 642
C+ T P +P+ + T P + +TP T +PTP + +++PTPS
Sbjct: 40 CTTSYTPTPSYTPTPSYTPTTS--YTPTTSYTPTTSYTPTPSYTPTTSYTPTPS 91
>SB_11044| Best HMM Match : FMO-like (HMM E-Value=3.4)
Length = 781
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 508 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWT 654
P +P+ P S+ T PP+ TP + TP P+ + + P T
Sbjct: 19 PAPTPTTPTSQATTASGPPII--TPIPLKETPTPALESAPAAMPDATDT 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,358,521
Number of Sequences: 59808
Number of extensions: 621910
Number of successful extensions: 2607
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 2080
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2537
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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