Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_J23
         (552 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    28   0.047
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.58 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.58 
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    21   5.4  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.4  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    21   5.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 28.3 bits (60), Expect = 0.047
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = -1

Query: 369 VVRPISPIVISKCIAVFVIPYLSSRK 292
           V++  + ++I  C+A+F++PY   R+
Sbjct: 121 VMKNFAILIIPTCVAMFIVPYFQDRR 146


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -3

Query: 286 VALQSSHNLHSFHILHGCSF-CRTEYS*C*NRYWNVYELFQSIQ--RYYRFFSILNEYFT 116
           + L +    H  +  HG S+ C  +Y  C N   +    F  +     +R F+ILN Y T
Sbjct: 133 LVLAAMTTFHLIYEAHGFSYKCGIQYHIC-NTVISATVCFMMLLMLEIWRRFTILNNYLT 191

Query: 115 I 113
           I
Sbjct: 192 I 192


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
 Frame = -3

Query: 286 VALQSSHNLHSFHILHGCSF-CRTEYS*C*NRYWNVYELFQSIQ--RYYRFFSILNEYFT 116
           + L +    H  +  HG S+ C  +Y  C N   +    F  +     +R F+ILN Y T
Sbjct: 129 LVLAAMTTFHLIYEAHGFSYKCGIQYHIC-NTVISATVCFMMLLMLEIWRRFTILNNYLT 187

Query: 115 I 113
           I
Sbjct: 188 I 188


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 402 TPSELHVWTR 431
           TP+ LH+W R
Sbjct: 208 TPNHLHIWPR 217


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 402 TPSELHVWTR 431
           TP+ LH+W R
Sbjct: 208 TPNHLHIWPR 217


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 402 TPSELHVWTR 431
           TP+ LH+W R
Sbjct: 208 TPNHLHIWPR 217


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 460 NQNPFGRGFGPDG 498
           N NPF +GF  +G
Sbjct: 192 NYNPFAKGFRENG 204


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 393 STKTPSELHVWTRTRTNVWAFTQSKPIRKRI 485
           S  TP++L + TR R  +   + SKP   R+
Sbjct: 362 SPVTPADLRLLTRGRLVLTVSSVSKPEALRL 392


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,487
Number of Sequences: 336
Number of extensions: 2816
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)