Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_F_J19
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    25   0.69 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.4  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.0 bits (52), Expect = 0.69
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +2

Query: 491 TNPSEQRWIVRILFIVPI 544
           T PSEQ+W + +L I P+
Sbjct: 372 TVPSEQQWGILVLIIAPL 389


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -1

Query: 432 NIPAMTCALRVCRNMGSC 379
           NI    C+   CRN GSC
Sbjct: 104 NINTDDCSPNPCRNNGSC 121


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 268 KQCDNNL*SNSQNEYHRYGEY 330
           +Q +NN  +N+QN +H  G +
Sbjct: 309 QQNNNNAATNNQNHHHHAGHH 329



 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 388 HIPADPQRAGHRGNIRVHGSIHYLP 462
           HIPA        G IR HG  +Y P
Sbjct: 56  HIPAKRAAYDCEGVIRHHGQWNYSP 80


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 428  IFVFTALFITCQQIYQHLRW 487
            +FV     +T ++ Y H++W
Sbjct: 1278 LFVLIVFLLTLKKDYLHIKW 1297


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +2

Query: 428  IFVFTALFITCQQIYQHLRW 487
            +FV     +T ++ Y H++W
Sbjct: 1278 LFVLIVFLLTLKKDYLHIKW 1297


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 593 YYVYFFTVRDCYEAFVIYS 649
           YY  FF V   Y   +IYS
Sbjct: 116 YYYAFFGVHLAYGVVIIYS 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,148
Number of Sequences: 336
Number of extensions: 3939
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)